Oligopeptidase B from Serratia proteamaculans. I. Determination of primary structure, isolation, and purification of wild-type and recombinant enzyme variants

2009 ◽  
Vol 74 (10) ◽  
pp. 1164-1172 ◽  
Author(s):  
R. F. Khairullin ◽  
A. G. Mikhailova ◽  
T. Yu. Sebyakina ◽  
N. L. Lubenets ◽  
R. H. Ziganshin ◽  
...  
Keyword(s):  
Primary Structure ◽  
Recombinant Enzyme ◽  
Wild Type ◽  
Isolation And Purification ◽  
Serratia Proteamaculans ◽  
Oligopeptidase B

Methods for the Determination of the Purity of Exosomes

2020 ◽  
Vol 25 (42) ◽  
pp. 4464-4485 ◽  
Author(s):  
Katarzyna Kluszczyńska ◽  
Liliana Czernek ◽  
Wojciech Cypryk ◽  
Łukasz Pęczek ◽  
Markus Düchler
Keyword(s):  
Drug Transport ◽  
Biological Fluids ◽  
Drug Carriers ◽  
Biological Functions ◽  
Isolation And Purification ◽  
Pubmed Database ◽  
High Concentrations ◽  
Targeted Release

Background: Exosomes open exciting new opportunities for advanced drug transport and targeted release. Furthermore, exosomes may be used for vaccination, immunosuppression or wound healing. To fully utilize their potential as drug carriers or immune-modulatory agents, the optimal purity of exosome preparations is of crucial importance. Methods: Articles describing the isolation and purification of exosomes were retrieved from the PubMed database. Results: Exosomes are often separated from biological fluids containing high concentrations of proteins, lipids and other molecules that keep vesicle purification challenging. A great number of purification protocols have been published, however, their outcome is difficult to compare because the assessment of purity has not been standardized. In this review, we first give an overview of the generation and composition of exosomes, as well as their multifaceted biological functions that stimulated various medical applications. Finally, we describe various methods that have been used to purify small vesicles and to assess the purity of exosome preparations and critically compare the quality of these evaluation protocols. Conclusion: Combinations of various techniques have to be applied to reach the required purity and quality control of exosome preparations.

scholarly journals Evaluation of wild-type MIC distributions as a tool for determination of clinical breakpoints for Mycobacterium tuberculosis

2009 ◽  
Vol 64 (4) ◽  
pp. 786-793 ◽  
Author(s):  
T. Schon ◽  
P. Jureen ◽  
C. G. Giske ◽  
E. Chryssanthou ◽  
E. Sturegard ◽  
...  
Keyword(s):  
Mycobacterium Tuberculosis ◽  
Wild Type ◽  
Clinical Breakpoints

scholarly journals Expression Level of Mature miR172 in Wild Type and StSUT4-Silenced Plants of Solanum tuberosum Is Sucrose-Dependent

2021 ◽  
Vol 22 (3) ◽  
pp. 1455
Author(s):  
Varsha Garg ◽  
Aleksandra Hackel ◽  
Christina Kühn
Keyword(s):  
Solanum Tuberosum ◽  
Wild Type ◽  
Potato Plants ◽  
Mature Leaves ◽  
In Vitro Plantlets ◽  
Long Time ◽  
Short Time ◽  
Cut Leaves

In potato plants, the phloem-mobile miR172 is involved in the sugar-dependent transmission of flower and tuber inducing signal transduction pathways and a clear link between solute transport and the induction of flowering and tuberization was demonstrated. The sucrose transporter StSUT4 seems to play an important role in the photoperiod-dependent triggering of both developmental processes, flowering and tuberization, and the phenotype of StSUT4-inhibited potato plants is reminiscent to miR172 overexpressing plants. The first aim of this study was the determination of the level of miR172 in sink and source leaves of StSUT4-silenced as well as StSUT4-overexpressing plants in comparison to Solanum tuberosum ssp. Andigena wild type plants. The second aim was to investigate the effect of sugars on the level of miRNA172 in whole cut leaves, as well as in whole in vitro plantlets that were supplemented with exogenous sugars. Experiments clearly show a sucrose-dependent induction of the level of mature miR172 in short time as well as long time experiments. A sucrose-dependent accumulation of miR172 was also measured in mature leaves of StSUT4-silenced plants where sucrose export is delayed and sucrose accumulates at the end of the light period.

scholarly journals The cell attachment domain of fibronectin. Determination of the primary structure.

1982 ◽  
Vol 257 (16) ◽  
pp. 9593-9597 ◽  
Author(s):  
M D Pierschbacher ◽  
E Ruoslahti ◽  
J Sundelin ◽  
P Lind ◽  
P A Peterson
Keyword(s):  
Primary Structure ◽  
Cell Attachment

scholarly journals Gating Competence of Constitutively Open CLC-0 Mutants Revealed by the Interaction with a Small Organic Inhibitor

2003 ◽  
Vol 122 (3) ◽  
pp. 295-306 ◽  
Author(s):  
Sonia Traverso ◽  
Laura Elia ◽  
Michael Pusch
Keyword(s):  
Chloride Channels ◽  
Bound State ◽  
Side Chain ◽  
Pore Channel ◽  
Kinetic Properties ◽  
Wild Type ◽  
High Affinity ◽  
Critical Residue ◽  
Fast Gating

Opening of CLC chloride channels is coupled to the translocation of the permeant anion. From the recent structure determination of bacterial CLC proteins in the closed and open configuration, a glutamate residue was hypothesized to form part of the Cl−-sensitive gate. The negatively charged side-chain of the glutamate was suggested to occlude the permeation pathway in the closed state, while opening of a single protopore of the double-pore channel would reflect mainly a movement of this side-chain toward the extracellular pore vestibule, with little rearrangement of the rest of the channel. Here we show that mutating this critical residue (Glu166) in the prototype Torpedo CLC-0 to alanine, serine, or lysine leads to constitutively open channels, whereas a mutation to aspartate strongly slowed down opening. Furthermore, we investigated the interaction of the small organic channel blocker p-chlorophenoxy-acetic acid (CPA) with the mutants E166A and E166S. Both mutants were strongly inhibited by CPA at negative voltages with a >200-fold larger affinity than for wild-type CLC-0 (apparent KD at −140 mV ∼4 μM). A three-state linear model with an open state, a low-affinity and a high-affinity CPA-bound state can quantitatively describe steady-state and kinetic properties of the CPA block. The parameters of the model and additional mutagenesis suggest that the high-affinity CPA-bound state is similar to the closed configuration of the protopore gate of wild-type CLC-0. In the E166A mutant the glutamate side chain that occludes the permeation pathway is absent. Thus, if gating consists only in movement of this side-chain the mutant E166A should not be able to assume a closed conformation. It may thus be that fast gating in CLC-0 is more complex than anticipated from the bacterial structures.

scholarly journals Characterization of recombinant-derived granulocyte-colony stimulating factor (G-CSF)

1988 ◽  
Vol 256 (1) ◽  
pp. 213-218 ◽  
Author(s):  
P Wingfield ◽  
R Benedict ◽  
G Turcatti ◽  
B Allet ◽  
J J Mermod ◽  
...  
Keyword(s):  
Coli Strain ◽  
Granulocyte Colony Stimulating Factor ◽  
Colony Stimulating Factor ◽  
Wild Type ◽  
Disulphide Bonds ◽  
Disulphide Bond Formation ◽  
Stimulating Factor ◽  
Factor G

Human granulocyte colony-stimulating factor (G-CSF), and a mutant having a Ser for Cys substitution at residue 18 were produced in Escherichia coli strain W3110. About 60 mg of pure protein was obtained from 50 g of wet cells with a recovery of about 20%. The proteins were characterized physically and chemically, including determination of disulphide bonds, which were found to exist between residues 37-43 and 65-75. Cys-18 is not involved in disulphide bond formation and was substituted by Ser with no effects on gross protein conformation or biological activity. Both the wild-type and the mutant recombinant-derived proteins, although not glycosylated, possess colony-stimulating activities. In a bioassay using the murine myelomonocytic leukaemic cell line WEH1 3B D+, activities were obtained which were similar to those of natural G-CSF and of a glycosylated recombinant-derived human G-CSF produced in monkey cells.

Nucleotide Clusters in Deoxyribonucleic Acids. VIII. The Pyrimidine Oligonucleotides of Bacteriophage S13 Wild Type DNA

1973 ◽  
Vol 51 (8) ◽  
pp. 1206-1211 ◽  
Author(s):  
John H. Spencer ◽  
Lynn Boshkov
Keyword(s):  
Nitrous Acid ◽  
Wild Type ◽  
Amber Mutant ◽  
Labelling Technique

A method for determination of the compositional assignment and comparison of the oligonucleotides in longer pyrimidine isostichs from closely related DNA's is described. The method is a dual 32P/33P labelling technique and has been used to investigate the pyrimidine oligonucleotide catalogue of bacteriophage S13 wild type DNA by comparison with the catalogue of the nitrous acid amber mutant S135suN15. The isomeric compositions of the dinucleotide CTp3 and trinucleotides CT2p4 and C2Tp4 from both DNA's were examined also. No cytosine (C) → thymine (T) transitions had occurred in the longer pyrimidine isostichs 7–11 inclusive, which constitute 10% of the catalogue of each of the two S13 DNA's, the catalogues of the two DNA's being indistinguishable.

Heteroarray of cobalt(II)tetrasulfophthalocyanine and cobalt(II) tetrakis(N-methyl-4-pyridyl)porphyrin: synthesis, isolation and electronic properties

2012 ◽  
Vol 16 (02) ◽  
pp. 244-249 ◽  
Author(s):  
Thiago T. Tasso ◽  
Wania C. Moreira
Keyword(s):  
Electronic Properties ◽  
Spectroscopic Characterization ◽  
Charge Transfer Process ◽  
Isolation And Purification ◽  
Electronic Densities ◽  
Porphyrin Synthesis ◽  
A Charge ◽  
Job's Method ◽  
First Time

Porphyrin and phthalocyanine macrocycles with ionic substituents can form mixed assemblies with interesting electronic properties for potential application on the development of new devices. This paper reports the synthesis, isolation and purification of heteroaggregate formed by cobalt(II) 4,4′,4″,4‴-tetrasulfophthalocyanine (CoTsPc) and cobalt(II) tetrakis(N-methyl-4-pyridyl)porphyrin (CoTMPyP), followed by its spectroscopic characterization. Spectroscopic titration, performed with a CoTsPc water/acetone solution, allowed the use of Job's method for determination of the heteroaggregates stoichiometry. The Job's plot revealed the formation of only one predominant heterocomplex in solution, containing two CoTsPc molecules in terminal positions and a central CoTMPyP one. For the first time, a method for isolation and purification of a mixed ionic array has been reported in the literature. The triad's electronic spectrum is quite different from the sum of the macrocycles isolated spectra, due to the overlap of their electronic densities and a charge transfer process between CoTsPc and CoTMPyP.

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