Further analysis of surface bond lengths measured for chemisorption on metal surfaces

1986 ◽  
Vol 64 (7) ◽  
pp. 1385-1389 ◽  
Author(s):  
K. A. R. Mitchell ◽  
S. A. Schlatter ◽  
R. N. S. Sodhi

This paper compares bond lengths deduced from the methods of surface crystallography with predictions from the Pauling–Schomaker–Stevenson approach and from a new alternative approach suggested by recent work of Brown and Altermatt. Examples considered are specifically for X—M surface bond lengths where atoms X from groups 16 or 17 are adsorbed on well-defined surfaces of a metal M. The alternative approach introduced here is parametrised with reference to structural data from solid compounds of formula MX. The two predictive approaches considered, when used together, appear to be quite adequate for guiding choices of trial model structures to be included in surface crystallographic analyses with low-energy electron diffraction (LEED); also they seem reasonable for checking the general reliability (or otherwise) of surface bond length data. Two further features introduced by this work are (i) evidence that the Cl—Ag distance reported by LEED for Cl adsorbed on the Ag(100) surface is broadly consistent with the structure of solid AgCl; (ii) evidence for S adsorbed on the Fe(110) surface that these analyses can guide investigations of lateral relaxations of surface metal atoms. As more reliable structural data become available, extensions of these analyses should help to identify the finer details in X—M bond lengths which result from the special coordination arrangements occurring at surfaces.

1978 ◽  
Vol 56 (10) ◽  
pp. 1364-1367 ◽  
Author(s):  
M. J. Bennett ◽  
J. T. Purdham

1,2,4,5-Tetraphenyl-3,6-dicarbornethoxytricyclo[3.1.0.02,4]hexane crystallizes in the monoclinic space group P21/c with a = 10.044(4), b = 9.500(2), c = 14.172(4) Å, β = 104.38(2)°, and Z = 2. Using 1032 unique reflections with I > 3σ(I), the structural data were refined by full matrix least-squares techniques to R = 0.038. The molecule was found to be in the anti-configuration. All bond lengths within the highly strained central tricyclic framework were equal within experimental error and average 1.531 Å.


2015 ◽  
Vol 71 (5) ◽  
pp. 1184-1196 ◽  
Author(s):  
Nicolas Coquelle ◽  
Aaron S. Brewster ◽  
Ulrike Kapp ◽  
Anastasya Shilova ◽  
Britta Weinhausen ◽  
...  

High-resolution structural information was obtained from lysozyme microcrystals (20 µm in the largest dimension) using raster-scanning serial protein crystallography on micro- and nano-focused beamlines at the ESRF. Data were collected at room temperature (RT) from crystals sandwiched between two silicon nitride wafers, thereby preventing their drying, while limiting background scattering and sample consumption. In order to identify crystal hits, new multi-processing and GUI-driven Python-based pre-analysis software was developed, namedNanoPeakCell, that was able to read data from a variety of crystallographic image formats. Further data processing was carried out usingCrystFEL, and the resultant structures were refined to 1.7 Å resolution. The data demonstrate the feasibility of RT raster-scanning serial micro- and nano-protein crystallography at synchrotrons and validate it as an alternative approach for the collection of high-resolution structural data from micro-sized crystals. Advantages of the proposed approach are its thriftiness, its handling-free nature, the reduced amount of sample required, the adjustable hit rate, the high indexing rate and the minimization of background scattering.


1978 ◽  
Vol 17 (8) ◽  
pp. 3303-3309 ◽  
Author(s):  
S. Y. Tong ◽  
A. R. Lubinsky ◽  
B. J. Mrstik ◽  
M. A. Van Hove
Keyword(s):  

2019 ◽  
Vol 39 (4) ◽  
pp. 211-221
Author(s):  
Milan Melník ◽  
Peter Mikuš

AbstractThe coordination chemistry of platinum (Pt) covers a huge field as shown by a recent survey covering the crystallographic and structural data of almost 200 monomeric examples of the Pt(η2-P2L)Cl2 type. About 20% of these complexes exist as isomers and are discussed in this review. Included are distortion (64%), cis-trans (20%), and ligand (16%) isomers. These are discussed in terms of the metallocyclic rings, and coordinations are drawn between donor atoms, bond lengths, and interbond angles, with attention to any trans-influence. Distortion isomers, differing only by the degree of distortion in Pt-L and L-Pt-L angles, are the most numerous. In this series of distortion and ligand isomers, the square-planar configuration about the Pt(II) atom has only cis-configuration. The total mean values of Pt-L bond distances (cis- vs. trans-configuration) are 2.228 Å (P) and 2.353 Å (Cl) vs. 2.312 (P) and 2.302 Å (Cl).


2020 ◽  
Vol 12 (4) ◽  
pp. 72-78
Author(s):  
V. Senchurin ◽  

The interaction of tri(para-tolyl)bismuth with tert-butyl hydroperoxide and bromodifluoroacetic acid in diethyl ether have synthesized tris(para-tolyl)bismuth bis(bromodifluoroacetate). The X-ray diffraction pattern for the crystal has been obtained at 293 K on an automatic diffractometer D8 Quest Bruker (MoKα-radiation, λ = 0.71073 Å, graphite monochromator), the results are [C25H21O4F4Br2Bi, M 830.22, the triclinic syngony, the symmetry group P–1; cell parameters: a = 10.292(8), b = 11.752(9), c = 12.693(9) Å, α = 89.42(2) degrees, β = 78.04(3) degrees, γ = 78.04(3) degrees; V = 1424.8(18) Å3; the crystal size is 0.73×0.57×0.41 mm; intervals of reflection indexes are –13 ≤ h ≤ 13, –15 ≤ k ≤ 15, –16 ≤ l ≤ 16; total reflections 45443; independent reflections 7096; Rint 0.1030; GOOF 1.049; R1 = 0.0739, wR2 = 0.1834; residual electron density 2.11/–2.78 e/Å3], the bismuth atom have a distorted trigonal-bipyramidal coordination. The OBiO axial angle is 172.2(3) degrees; the sum of the CBiC angles in the equatorial plane is 360.6. The Bi–O and Bi–C bond lengths are 2.275(8), 2.295(8) Å and 2.187(10)–2.212(13) Å. The Bi•••O=С distances are 3.127(10) and 3.159(10) Å, which is less than the sum of the van der Waals radii of bismuth and oxygen (3.59 Å). There are no intermolecular contacts H∙∙∙Hal in the crystal. Complete tables of coordinates of atoms, bond lengths and valence angles for the structure are deposited at the Cambridge Structural Data Bank (no. 1923097; [email protected]; http: //www.ccdc.cam.ac.uk).


1996 ◽  
Vol 61 (12) ◽  
pp. 1754-1766
Author(s):  
Svetlana Pakhomova ◽  
Jan Ondráček ◽  
František Jursík

[Co(NH3)4(H2O)2]OH . [Co(ohb-(S)-Leu)2] . 2 H2O (ohb, o-hydroxybenzyl) was characterized by single-crystal X-ray diffraction which shows that both ligands in the [Co(ohb-(S)-Leu)2]- anion assume facial coordination mode with all donor atoms trans to each other, proposed on the basis of UV-VIS and 13C NMR spectroscopy, with R,S configuration of secondary N atoms. Compound crystallizes in the tetragonal space group I41 with unit cell dimensions a = 22.173(7), c = 13.270(2) Å, V = 6 524 Å3, Z = 4. Structural data show that both ligands are not equivalent. Bond angles and bond lengths depend on whether secondary N atoms adopt R or S configuration. The average bond lengths are shorter when the ohb-(S)-Leu ligand coordinates with (N)R configuration.


1988 ◽  
Vol 66 (1) ◽  
pp. 132-138 ◽  
Author(s):  
William O. Nelson ◽  
Chris Orvig ◽  
Steven J. Rettig ◽  
James Trotter

Details of the preparation and crystal structures of the title compounds are given. Crystals of (3-hydroxy-2-methyl-4-pyridinonato)diphenylboron, 1, are orthorhombic, a = 13.4010(6), b = 15.005(1), c = 14.833(1) Å, Z = 8, space group Pbca, and those of (3-hydroxy-1,2-dimethyl-4-pyridinonato)diphenylboron, 2, are monoclinic, a = 8.2617(5), b = 12.374(1), c = 16.104(1) Å, β = 92.741(5)°, Z = 4, space group P21/n. Both structures were solved by direct methods and were refined by full-matrix least-squares procedures to R = 0.047 and 0.071 for 1654 and 1831 reflections with I ≥ 3σ(I), respectively. Both molecules contain five-membered C2O2B chelate rings, that in 2 being nearly planar. Structural data indicate weaker overall binding of the ligand oxygen atoms to boron in 1 than in 2. Bond lengths (corrected for libration) are O—B = 1.497(5) and 1.650(5), C—B = 1.600(5) and 1.599(5) Å for 1; O—B = 1.542(5) and 1.569(5), C—B = 1.607(6) and 1.609(6) Å for 2.


Sign in / Sign up

Export Citation Format

Share Document