Intrinsic stochasticity and the emergence of collective behaviours in insect swarms

2021 ◽  
Vol 44 (2) ◽  
Author(s):  
Andy M. Reynolds
2016 ◽  
Vol 3 (12) ◽  
pp. 160578 ◽  
Author(s):  
Mohammad Soltani ◽  
Abhyudai Singh

Expression of many genes varies as a cell transitions through different cell-cycle stages. How coupling between stochastic expression and cell cycle impacts cell-to-cell variability (noise) in the level of protein is not well understood. We analyse a model where a stable protein is synthesized in random bursts, and the frequency with which bursts occur varies within the cell cycle. Formulae quantifying the extent of fluctuations in the protein copy number are derived and decomposed into components arising from the cell cycle and stochastic processes. The latter stochastic component represents contributions from bursty expression and errors incurred during partitioning of molecules between daughter cells. These formulae reveal an interesting trade-off: cell-cycle dependencies that amplify the noise contribution from bursty expression also attenuate the contribution from partitioning errors. We investigate the existence of optimum strategies for coupling expression to the cell cycle that minimize the stochastic component. Intriguingly, results show that a zero production rate throughout the cell cycle, with expression only occurring just before cell division, minimizes noise from bursty expression for a fixed mean protein level. By contrast, the optimal strategy in the case of partitioning errors is to make the protein just after cell division. We provide examples of regulatory proteins that are expressed only towards the end of the cell cycle, and argue that such strategies enhance robustness of cell-cycle decisions to the intrinsic stochasticity of gene expression.


2020 ◽  
Author(s):  
Gwangmin Kim ◽  
Jae Hyun In ◽  
Hakseung Rhee ◽  
Woojoon Park ◽  
Hanchan Song ◽  
...  

Abstract The intrinsic stochasticity of the memristor can be used to generate true random numbers, essential for non-decryptable hardware-based security devices. Here we propose a novel and advanced method to generate true random numbers utilizing the stochastic oscillation behavior of a NbOx mott memristor, exhibiting self-clocking, fast and variation tolerant characteristics. The random number generation rate of the device can be at least 40 kbs-1, which is the fastest record compared with previous volatile memristor-based TRNG devices. Also, its dimensionless operating principle provides high tolerance against both ambient temperature variation and device-to-device variation, enabling robust security hardware applicable in harsh environments.


2019 ◽  
Vol 878 (1) ◽  
pp. 67 ◽  
Author(s):  
Chris Byrohl ◽  
Robert Fisher ◽  
Dean Townsley

2012 ◽  
Vol 85 (5) ◽  
Author(s):  
Thomas E. Woolley ◽  
Ruth E. Baker ◽  
Eamonn A. Gaffney ◽  
Philip K. Maini ◽  
Sungrim Seirin-Lee

2017 ◽  
Author(s):  
Romain Yvinec ◽  
Luiz Guilherme S. da Silva ◽  
Guilherme N. Prata ◽  
John Reinitz ◽  
Alexandre Ferreira Ramos

AbstractRecent experimental data on the transcription dynamics of eve gene stripe two formation of Drosophila melanogaster embryos occurs in bursts of multiple sizes and durations. That has motivated the proposition of a transcription model having multiple ON states for the promoter of the eve gene each of them characterized by different synthesis rate. To understand the role of multiple ON states on gene transcription we approach the exact solutions for a two state stochastic model for gene transcription in D. melanogaster embryos and derive its bursting limit. Simulations based on the Gillespie algorithm at the bursting limit show the occurrence of bursts of multiple sizes and durations. Based on our theoretical approach, we interpret the aforementioned experimental data as a demonstration of the intrinsic stochasticity of the transcriptional processes in fruit fly embryos. Then, we conceive the experimental arrangement to determine when gene transcription has multiple ON promoter state in a noisy environment.


2019 ◽  
Vol 3 (12) ◽  
pp. 1345-1345
Author(s):  
Lior Lebovich ◽  
Ran Darshan ◽  
Yoni Lavi ◽  
David Hansel ◽  
Yonatan Loewenstein

2006 ◽  
Vol 36 (2b) ◽  
pp. 550-556 ◽  
Author(s):  
S. R. Barocio ◽  
E. Chávez-Alarcón ◽  
C. Gutierrez-Tapia

2014 ◽  
Vol 11 (99) ◽  
pp. 20140636 ◽  
Author(s):  
Arkady Zgonnikov ◽  
Ihor Lubashevsky ◽  
Shigeru Kanemoto ◽  
Toru Miyazawa ◽  
Takashi Suzuki

Understanding how humans control unstable systems is central to many research problems, with applications ranging from quiet standing to aircraft landing. Increasingly, much evidence appears in favour of event-driven control hypothesis: human operators only start actively controlling the system when the discrepancy between the current and desired system states becomes large enough. The event-driven models based on the concept of threshold can explain many features of the experimentally observed dynamics. However, much still remains unclear about the dynamics of human-controlled systems, which likely indicates that humans use more intricate control mechanisms. This paper argues that control activation in humans may be not threshold-driven, but instead intrinsically stochastic, noise-driven. Specifically, we suggest that control activation stems from stochastic interplay between the operator's need to keep the controlled system near the goal state, on the one hand, and the tendency to postpone interrupting the system dynamics, on the other hand. We propose a model capturing this interplay and show that it matches the experimental data on human balancing of virtual overdamped stick. Our results illuminate that the noise-driven activation mechanism plays a crucial role at least in the considered task, and, hypothetically, in a broad range of human-controlled processes.


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