scholarly journals Production of Platinum Atom Nanoclusters at One End of Helical Plant Viruses

2013 ◽  
Vol 2013 ◽  
pp. 1-7 ◽  
Author(s):  
Yuri Drygin ◽  
Olga Kondakova ◽  
Joseph Atabekov

Platinum atom clusters (Pt nanoparticles, Pt-NPs) were produced selectively at one end of helical plant viruses, tobacco mosaic virus (TMV) and potato virus X (PVX), when platinum coordinate compounds were reduced chemically by borohydrides. Size of the platinum NPs depends on conditions of the electroless deposition of platinum atoms on the virus. Results suggest that the Pt-NPs are bound concurrently to the terminal protein subunits and the 5′ end of encapsidated TMV RNA. Thus, a special structure of tobacco mosaic virus and potato X virus particles with nanoparticles of platinum, which looks like a push-pin with platinum head and virus needle, was obtained. Similar results were obtained with ultrasonically fragmented TMV particles. By contrast, the Pt-NPs fully filled the central axial hole ofin vitroassembled RNA-free TMV-like particles. We believe that the results presented here will be valuable in the fundamental understanding of interaction of viral platforms with ionic metals and in a mechanism of nanoparticles formation.

2005 ◽  
Vol 79 (22) ◽  
pp. 14421-14428 ◽  
Author(s):  
Alexey I. Prokhnevsky ◽  
Valera V. Peremyslov ◽  
Valerian V. Dolja

ABSTRACT The cell-to-cell movement of plant viruses involves translocation of virus particles or nucleoproteins to and through the plasmodesmata (PDs). As we have shown previously, the movement of the Beet yellows virus requires the concerted action of five viral proteins including a homolog of cellular ∼70-kDa heat shock proteins (Hsp70h). Hsp70h is an integral component of the virus particles and is also found in PDs of the infected cells. Here we investigate subcellular distribution of Hsp70h using transient expression of Hsp70h fused to three spectrally distinct fluorescent proteins. We found that fluorophore-tagged Hsp70h forms motile granules that are associated with actin microfilaments, but not with microtubules. In addition, immobile granules were observed at the cell periphery. A pairwise appearance of these granules at the opposite sides of cell walls and their colocalization with the movement protein of Tobacco mosaic virus indicated an association of Hsp70h with PDs. Treatment with various cytoskeleton-specific drugs revealed that the intact actomyosin motility system is required for trafficking of Hsp70h in cytosol and its targeting to PDs. In contrast, none of the drugs interfered with the PD localization of Tobacco mosaic virus movement protein. Collectively, these findings suggest that Hsp70h is translocated and anchored to PDs in association with the actin cytoskeleton.


1999 ◽  
Vol 354 (1383) ◽  
pp. 603-611 ◽  
Author(s):  
John G. Shaw

In order to establish infections, viruses must be delivered to the cells of potential hosts and must then engage in activities that enable their genomes to be expressed and replicated. With most viruses, the events that precede the onset of production of progeny virus particles are referred to as the early events and, in the case of positive–strand RNA viruses, they include the initial interaction with, and the entry of, host cells and the release (uncoating) of the genome from the virus particles. Though the early events remain one of the more poorly understood areas of plant virology, the virus with which most of the relevant research has been performed is tobacco mosaic virus (TMV). In spite of this effort, there remains much uncertainty about the form or constituent of the virus that actually enters the initially invaded cell in a plant and about the mechanism(s) that trigger the subsequent uncoating (virion disassembly) reactions. A variety of approaches have been used in attempts to determine the fate of TMV particles that are involved in the establishment of an infection and these are briefly described in this review. In some recent work, it has been proposed that the uncoating process involves the bidirectional release of coat protein subunits from the viral RNA and that these activities may be mediated by cotranslational and coreplicational disassembly mechanisms.


Parasitology ◽  
1942 ◽  
Vol 34 (3-4) ◽  
pp. 315-352 ◽  
Author(s):  
Roy Markham ◽  
Kenneth M. Smith ◽  
Douglas Lea

In this review we have given an account of the various methods which are available to determine the size of virus particles. In § IV we have endeavoured to bring the ultrafiltration method into agreement with other methods by suggesting a different factor for converting pore size to virus size from the factors commonly used. Throughout we have recognized the probability that most viruses are hydrated in solution and have distinguished between the size and molecular weight in solution and the size and molecular weight when dried.In § VII we have given formulae suitable for interpreting centrifugation and diffusion data when the possibility of hydration is contemplated.It is evident that this complication, added to that of shape, makes it necessary for several measurements by different methods to be made before one can claim to know the size of a virus. For this reason, only in the cases of three viruses have we thought the data sufficiently adequate to enable the size and shape and molecular weight of the Virus, both dry and hydrated, to be stated. These three viruses, tobacco mosaic, tomato bushy stunt and vaccinia respectively, are separately discussed in § X.It will be clear from the preceding sections that, while the position regarding our knowledge of the absolute sizes of viruses is far from satisfactory, there has been amassed a large amount of data bearing on this subject. We should, however, point out that we have found it necessary to select what we consider to be the best experimental data in some cases and that there may be conflicting ideas expressed by various authorities. Frampton (1942) has studied the electron microscope photographs published by Stanley & Anderson (1941) and Anderson & Stanley (1941) and arrives at an entirely different estimate of the length of tobacco mosaic virus. Kausche, Pfankuch & Ruska (1939) reported one value for the length of this virus which is approximately half that given by Stanley & Anderson. Electron photomicrographs published by von Ardenne (1940) and Holmes (1941) for what are probably strains of the same virus, also suggest that the values given should not be taken as absolute. Frampton (1939a,b), on the basis of diffusion and viscosity experiments and the stream birefringence of this virus, has suggested previously that it forms a gel at any concentration and therefore cannot be said to have a size. Lauffer (1940) has given reasons for supposing this argument to be incorrect. Bernal & Fankuchen (1941a) have discussed the possibility of tobacco mosaic virus particles being shorter than the value taken from Kauscheet al.(1939) and conclude that in the plant itself the particle may be as short as 100 mμ.In obtaining values of size arid shape from electron microscope data we have made the assumptions, which may not be correct, that long, thin viruses shrink in width rather than in length on drying and that almost spherical viruses contract approximately evenly in all directions. At the moment there would seem to be no method of proving or disproving the truth of these assumptions, but we believe it unlikely that drying will result in such a gross change in shape that it would invalidate our calculations. For instance, in the case of haemocyanin fromHelix pomatia, it seems improbable that, on drying, an already anhydrous ellipsoidal molecule of 66 × 15·32 mμ would contract in length and expand in-width to form a sphere of some 24 mμ diameter.In our treatment of hydration we have found it necessary to regard the density and volume of ‘bound’ water as being the same as that of water in bulk, which may not be entirely true. However, we regard the total volume occupied by water in cases of great hydration, as shown by tomato bushy stunt virus, as being not markedly smaller than that of the same mass of free water. It is, nevertheless, a well-established fact that in certain cases, gelatin for example (Svedberg, 1924), a small contraction in volume does take place when dry protein is added to water. This phenomenon does not, however, necessitate the assumption that the water of hydration, is denser than ordinary water, and can be explained in other ways.The viscosity of solutions of viruses, especially the rod-shaped plant viruses, has attracted much attention as a method of finding frictional and axial ratios of viruses (Frampton, 1939a,b; Lauffer, 1938; Loring, 1938; Neurath, Cooper, Sharp, Taylor, Beard & Beard, 1941; Kobinson, 1939a,b; Stanley, 1939), but, in addition to the lack of experimental verification of the formulae used, in many cases (Robinson, 1939a,b; Frampton, 1939a,b) the formulae have been applied to experimental results obtained in circumstances which exclude the fundamental postulates on which the formulae are based. For this reason we have omitted a detailed discussion of such methods.It would appear that in order to obtain evidence as to the size of a virus it is desirable to study the virus in as purified a form as possible and also to show that when ‘homo-geneous’ preparations are obtained, they do not consist merely of macromolecular substances contaminated with a small quantity of virus. Furthermore it is desirable to obtain at least sufficient data to enable one to assess both size and shape of the particles rather than to assume some shape or some density value which may be incorrect.


1984 ◽  
Vol 62 (11) ◽  
pp. 2336-2339 ◽  
Author(s):  
Richard Hogue ◽  
Alain Asselin

The intermediates of disassembly of the U1, U4, U6, and U7 strains of tobacco mosaic virus (TMV) induced by alkali and urea were directly analysed by electrophoresis in composite polyacrylamide (2.0 to 2.5% (w/v)) – agarose (0.5% (w/v)) gels, using a discontinuous buffer system with Tris, borate, EDTA, and sodium chloride (pH 8.3). The results show no difference between the disassembly patterns of the four strains. In the case of alkaline stripping, two new major partially stripped virus (PSV) particles (PSV 5a and PSV 5c) and several minor intermediates were characterized. The overall results indicate that polyacrylamide–agarose gel electrophoresis is superior to agarose gel electrophoresis and to sucrose density gradient ccntrifugation for the analytical separation of PSVs. Polyacrylamide–agarose gel electrophoresis is thus a rather simple, rapid, and efficient method of studying in vitro disassembly of plant viruses.


1986 ◽  
Vol 41 (4) ◽  
pp. 477-482 ◽  
Author(s):  
J. M. Wertz ◽  
P. Smitamana ◽  
S. Sarkar

A mutant of tobacco mosaic virus has been isolated after treating the dahlemense strain with nitrous acid and called D 16y. Like dahlemense it produces necrotic lesions on java-type tobacco but induces a strong chlorosis on samsun tobacco, in which it spreads systemically. Yield of virus from infected plants is significantly lower than that of dahlemense and the virus particles are unstable in vitro, and probably also in vivo. It is serologically closely related to dahlemense, its coat protein is somewhat less electronegative in weakly alkaline medium and it is inactivated at elevated temperatures more easily than dahlemense. Its coat protein contains a histidine residue, that is not present in dahlemense. The poor biological activity and the instability of D 16y toward storage and high temperatures are properties that are common with many defective mutants. D 16y is possibly the first induced mutant of dahlemense and with its several altered characters is expected to be very useful for comparative studies on the structure and action of TMV.


1999 ◽  
Vol 354 (1383) ◽  
pp. 537-550 ◽  
Author(s):  
P. J. G. Butler

The tobacco mosaic virus (TMV) particle was the first macromolecular structure to be shown to self–assemble in vitro , allowing detailed studies of the mechanism. Nucleation of TMV self–assembly is by the binding of a specific stem–loop of the single–stranded viral RNA into the central hole of a two–ring sub–assembly of the coat protein, known as the ‘disk’. Binding of the loop onto its specific binding site, between the two rings of the disk, leads to melting of the stem so more RNA is available to bind. The interaction of the RNA with the protein subunits in the disk cause this to dislocate into a proto–helix, rearranging the protein subunits in such a way that the axial gap between the rings at inner radii closes, entrapping the RNA. Assembly starts at an internal site on TMV RNA, about 1 kb from its 3′–terminus, and the elongation in the two directions is different. Elongation of the nucleated rods towards the 5′–terminus occurs on a ‘travelling loop’ of the RNA and, predominantly, still uses the disk sub–assembly of protein subunits, consequently incorporating approximately 100 further nucleotides as each disk is added, while elongation towards the 3′–terminus uses smaller protein aggregates and does not show this ’quantized‘ incorporation.


2007 ◽  
Vol 81 (21) ◽  
pp. 11768-11780 ◽  
Author(s):  
Tibor Csorba ◽  
Aurelie Bovi ◽  
Tamás Dalmay ◽  
József Burgyán

ABSTRACT One of the functions of RNA silencing in plants is to defend against molecular parasites, such as viruses, retrotransposons, and transgenes. Plant viruses are inducers, as well as targets, of RNA silencing-based antiviral defense. Replication intermediates or folded viral RNAs activate RNA silencing, generating small interfering RNAs (siRNAs), which are the key players in the antiviral response. Viruses are able to counteract RNA silencing by expressing silencing-suppressor proteins. It has been shown that many of the identified silencing-suppressor proteins bind long double-stranded RNA or siRNAs and thereby prevent assembly of the silencing effector complexes. In this study, we show that the 122-kDa replicase subunit (p122) of crucifer-infecting Tobacco mosaic virus (cr-TMV) is a potent silencing-suppressor protein. We found that the p122 protein preferentially binds to double-stranded 21-nucleotide (nt) siRNA and microRNA (miRNA) intermediates with 2-nt 3′ overhangs inhibiting the incorporation of siRNA and miRNA into silencing-related complexes (e.g., RNA-induced silencing complex [RISC]) both in vitro and in planta but cannot interfere with previously programmed RISCs. In addition, our results also suggest that the virus infection and/or sequestration of the siRNA and miRNA molecules by p122 enhances miRNA accumulation despite preventing its methylation. However, the p122 silencing suppressor does not prevent the methylation of certain miRNAs in hst-15 mutants, in which the nuclear export of miRNAs is compromised.


Virology ◽  
1988 ◽  
Vol 165 (1) ◽  
pp. 310-312 ◽  
Author(s):  
David D. Dunigan ◽  
Ralf G. Dietzgen ◽  
James E. Schoelz ◽  
Milton Zaitlin

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