Abstract P094: Targeted sequencing revealed clonal genetic changes in spatially different foci in urothelial carcinoma of bladder

Author(s):  
M. Talha Ugurlu ◽  
Rachel Goldberg ◽  
Pritam Sadhukhan ◽  
Mohammad O. Hoque
Cancers ◽  
2021 ◽  
Vol 13 (12) ◽  
pp. 2993
Author(s):  
Barbara Kiesewetter ◽  
Christiane Copie-Bergman ◽  
Michael Levy ◽  
Fangtian Wu ◽  
Jehan Dupuis ◽  
...  

Background: In Western countries, the prevalence of gastric mucosa-associated lymphoid tissue (MALT) lymphoma has declined over the last three decades. Contemporaneously, H. pylori negative gastric MALT lymphoma is increasingly encountered, and their genetic basis and clinical features remain elusive. Methods: A total of 57 cases of H. pylori negative gastric MALT lymphoma were reviewed and investigated for chromosome translocation by fluorescence in-situ hybridization and for somatic mutations by the targeted sequencing of 93 genes. Results: MALT1 translocation, most likely t(11;18)(q21;q21)/BIRC3-MALT1, was detected in 39% (22/57) cases, and IGH translocation was further seen in 12 MALT1-negative cases, together accounting for 60% of the cohort. Targeted sequencing was successful in 35 cases, and showed frequent mutations in NF-κB signaling pathways (TNFAIP3 = 23%, CARD11 = 9%, MAP3K14 = 9%), together affecting 14 cases (40%). The NF-κB pathway mutations were mutually exclusive from MALT1, albeit not IGH translocation, altogether occurring in 86% of cases. There was no significant correlation between the genetic changes and clinicopathological parameters. The patients showed a median of progression-free survival (PFS) of 66.3 months, and a significant superior PFS when treated with systemic versus antibiotic therapy (p = 0.004). Conclusion: H. pylori negative gastric MALT lymphoma is characterized by highly frequent genetic changes in the NF-κB signaling pathways.


Cancers ◽  
2021 ◽  
Vol 13 (23) ◽  
pp. 6040
Author(s):  
Michèle J. Hoffmann ◽  
Wolfgang A. Schulz

Urothelial carcinoma (UC) is the most frequent histological type of cancer in the urinary bladder. Genomic changes in UC activate MAPK and PI3K/AKT signal transduction pathways, which increase cell proliferation and survival, interfere with cell cycle and checkpoint control, and prevent senescence. A more recently discovered additional category of genetic changes in UC affects chromatin regulators, including histone-modifying enzymes (KMT2C, KMT2D, KDM6A, EZH2), transcription cofactors (CREBBP, EP300), and components of the chromatin remodeling complex SWI/SNF (ARID1A, SMARCA4). It is not yet well understood how these changes contribute to the development and progression of UC. Therefore, we review here the emerging knowledge on genomic and gene expression alterations of chromatin regulators and their consequences for cell differentiation, cellular plasticity, and clonal expansion during UC pathogenesis. Our analysis identifies additional relevant chromatin regulators and suggests a model for urothelial carcinogenesis as a basis for further mechanistic studies and targeted therapy development.


2016 ◽  
Vol 7 (10) ◽  
pp. 1347-1352 ◽  
Author(s):  
Meng-Che Hsieh ◽  
Cheng-Hua Huang ◽  
Po-Hui Chiang ◽  
Yen-Yang Chen ◽  
Yeh Tang ◽  
...  

2020 ◽  
Vol 138 ◽  
pp. S61-S62
Author(s):  
P. Sadhukhan ◽  
M.T. Ugurlu ◽  
A. Ooki ◽  
M. Hoque

2019 ◽  
Vol 464 (1-2) ◽  
pp. 51-63
Author(s):  
Madhuram Khandelwal ◽  
Vivek Anand ◽  
Sandeep Appunni ◽  
Amlesh Seth ◽  
Prabhjot Singh ◽  
...  

2015 ◽  
Vol 66 (2) ◽  
pp. 262-269 ◽  
Author(s):  
Enrico Munari ◽  
Alcides Chaux ◽  
Leonel Maldonado ◽  
Eva Compérat ◽  
Justine Varinot ◽  
...  

2012 ◽  
Vol 30 (5) ◽  
pp. 688-694 ◽  
Author(s):  
Jianbin Bi ◽  
Xuelei Chen ◽  
Yuxi Zhang ◽  
Bingxun Li ◽  
Jiawei Sun ◽  
...  

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