Molecular phylogenetic relationships of the Liolaemus rothi complex and a new species of lizard from Auca Mahuida Volcano (Squamata: Liolaemini)

Zootaxa ◽  
2013 ◽  
Vol 3608 (4) ◽  
pp. 221-238 ◽  
Author(s):  
LUCIANO JAVIER AVILA ◽  
MELISA OLAVE ◽  
CRISTIAN HERNAN FULVIO PEREZ ◽  
DANIEL ROBERTO PEREZ ◽  
MARIANA MORANDO

A new species of lizard of the genus Liolaemus from Neuquén Province, western Argentina, is described. The new species is a member of the Liolaemus rothi species complex, and mitochondrial and nuclear molecular data show it as sister taxon of the clade composed of (L. hermannunezi (L. tromen + L. loboi)), differing in size, squamation, coloration, and sexual dimorphism from the other species of this group. Liolaemus sitesi sp. nov. has a dark body coloration with series of notched blotches on the dorsum, with bright spots, and a very iridescent yellow-green coloration in natural light. Liolaemus sitesi sp. nov. is found only in the Auca Mahuida volcano and is terrestrial, dwelling on the stony slopes with sandy soil between 1300 m  and the volcano summit.

Zootaxa ◽  
2019 ◽  
Vol 4683 (3) ◽  
pp. 381-411 ◽  
Author(s):  
L. LEE GRISMER ◽  
PERRY L., JR. WOOD ◽  
EVAN S. H. QUAH ◽  
SHAHRUL ANUAR ◽  
NIKOLAY A. POYARKOV ◽  
...  

Molecular phylogenetic analyses of the sister species Sphenomorphus stellatus and S. praesignis based on the mitochondrial genes 12S and 16S rRNA recover the former as paraphyletic with respect to the latter in that a specimen of S. stellatus from the type locality in Peninsular Malaysia is more closely related to S. praesignis than to Indochinese populations of S. stellatus. Furthermore, the phylogeny indicates that the Indochinese populations represent two species, thus resulting in four major lineages within this clade. These relationships are consistent with multivariate and univariate analyses of morphological and discrete color pattern data which statistically define and diagnose the four lineages and together with the molecular data, provide the foundation for robust, testable, species-level hypotheses. As such, S. stellatus is herein restricted to Peninsular Malaysia; S. annamiticus is resurrected for the circum-continental populations ranging through southeastern Thailand, southern Cambodia, and southern Vietnam; a new species—S. preylangensis sp. nov.—is described from an isolated mountain, Phnom Chi, from the Prey Lang Wildlife Sanctuary in central Cambodia; and the taxonomy of S. praesignis remains unchanged. The description of S. preylangensis sp. nov. underscores the necessity to conserve this remnant of lowland evergreen rainforest in the Prey Lang Wildlife Sanctuary. 


Phytotaxa ◽  
2019 ◽  
Vol 392 (1) ◽  
pp. 45 ◽  
Author(s):  
ZHUN XU ◽  
NENG WEI ◽  
YING TAN ◽  
SHUAI PENG ◽  
VERONICAH MUTELE NGUMBAU ◽  
...  

Paris lihengiana (Melanthiaceae), a new species from Yunnan Province, China, is described and illustrated based on evidence from morphological characters and molecular phylogeny. It differs from other species of Paris in its pubescent stem, pedicel and abaxial leaf surface, as well as other characters. Molecular phylogenetic analysis of 33 taxa in Paris was conducted based on nuclear ribosomal ITS and six plastid markers. Paris lihengiana is supported as a new species by both morphological characters and molecular data.


2019 ◽  
Vol 94 ◽  
Author(s):  
A. Maldonado ◽  
R.O. Simões ◽  
J. São Luiz ◽  
S.F. Costa-Neto ◽  
R.V. Vilela

Abstract Nematodes of the genus Physaloptera are globally distributed and more than 100 species are known. Their life cycle involves insects, including beetles, cockroaches and crickets, as intermediate hosts. This study describes a new species of Physaloptera and reports molecular phylogenetic analyses to determine its relationships within the family Physalopteridae. Physaloptera amazonica n. sp. is described from the stomach of the caviomorph rodent Proechimys gardneri collected in the Amazon rainforest in the state of Acre, Brazil. The species is characterized by the male having the first and second pair of sessile papillae asymmetrically placed, lacking a median papilla-like protuberance between the third pairs of sessile papillae, differentiated by size and shape of the spicules, while females have four uterine branches. For both nuclear 18S rRNA and MT-CO1 gene-based phylogenies, we recovered Turgida sequences forming a clade nested within Physaloptera, thus making Physaloptera paraphyletic to the exclusion of Turgida, suggesting that the latter may have evolved from the former monodelphic ancestral state to a derived polydelphic state, or that some species of Physaloptera may belong to different genera. Relationships between most taxa within Physaloptera were poorly resolved in our phylogenies, producing multifurcations or a star phylogeny. The star-like pattern may be attributed to evolutionary processes where past simultaneous species diversification events took place. Physaloptera amazonica n. sp. formed an independent lineage, separately from the other species of Physaloptera, thus supporting the status of a new species. However, all molecular data suggested a closer relationship with other Neotropical species. In conclusion, we added a new species to this already largely diverse genus Physaloptera, bringing new insights to its phylogenetic relationships. Further analyses, adding more species and markers, should provide a better understanding of the evolutionary history of physalopterids.


PhytoKeys ◽  
2020 ◽  
Vol 165 ◽  
pp. 85-98
Author(s):  
Neng Wei ◽  
Zhi-Xiang Zhong ◽  
David Kimutai Melly ◽  
Solomon Kipkoech ◽  
Benjamin Muema Watuma ◽  
...  

Zehneria grandibracteata, a new species of Cucurbitaceae from western Kenya, is described here, based on morphological and molecular data. It has long been misidentified as the widely-distributed species Z. scabra. However, it differs by its ovate leafy probract at the base of the inflorescences, subglabrous condition of the entire plant, shorter receptacle-tube and filaments, as well as denser and sessile inflorescences. Furthermore, the molecular phylogenetic analysis of Zehneria, based on nrITS sequences, further supports the argument that Z. grandibracteata should be segregated from Z. scabra.


2020 ◽  
pp. 515-576
Author(s):  
Frank Bungartz ◽  
Ulrik Søchting ◽  
Ulf Arup

The lichen family Teloschistaceae from the Galapagos is revised. Most of the species belong to the Caloplacoideae, two to Teloschistoideae and a few to Xanthorioideae, three subfamilies not validly published, which is remedied here. Four different datasets were analyzed using Bayesian inference. For the bulk of the species, a combined dataset of nrITS, nrLSU and mrSSU was analyzed. Additionally, three analyses were performed using nrITS to further investigate phylogenetic relationships within and between species in each subfamily, and in the genera Xanthomendoza and Squamulea. Four new genera are described: Lacrima, Oceanoplaca, Phaeoplaca, Sucioplaca. Twenty-four species are reported, of which ten are new to science: Caloplaca nigra, Lacrima galapagoensis, Oceanoplaca chemoisidiosa, O. sideritoides, Phaeoplaca tortuca, Squamulea chelonia, S. humboldtiana, S. osseophila, S. oceanica, and Xanthomendoza leoncita. Several new combinations are proposed and three species of Xanthomendoza are reduced to synonymy. Several new combinations and species placed into synonymy do not occur in the Galapagos, but are treated as a consequence of our taxonomic revision. Morphology, anatomy, secondary chemistry, distribution and molecular phylogenetic affiliation are presented for each species and a key is provided. Eight different chemical patterns are quantitatively described based on HPLC analyses. The new genus Lacrima includes L. galapagoensis, a species without vegetative propagules, and two densely isidiate species, L. epiphora and L. aphanotripta that are morphologically similar to ‘Caloplaca’ wrightii. The only species of Galapagos Teloschistaceae that contains xanthones is placed into Huneckia. Oceanoplaca includes two species with the new anthraquinone isidiosin, O. isidiosa and O. chemoisidiosa, while a third species, O. sideritoides, does not contain this secondary metabolite. Phaeoplaca camptidia has previously been reported from Galapagos, but our phylogenetic analysis suggests that it is a new species, here named P. tortuca. An isolated position is occupied by ‘Caloplaca’ diplacia, which we place in it its own monotypic genus Sucioplaca. Some Galapagos Teloschistaceae can be considered a ‘residue’ of unresolved Caloplaca s.l., i.e. the corticolous C. floridana is possibly related to the saxicolous C. nigra, while C. cupulifera can currently not be placed. Squamulea remains particularly problematic and includes S. phyllidizans, that is nested among otherwise unresolved Squamulea species. Based on molecular data, S. phyllidizans is close to ‘Huriella’. ‘Huriella’ flakusii, described from Peru, is confirmed to occur in the Galapagos and the genus is reduced to synonymy with Squamulea. The Squamulea squamosa/subsoluta group remains largely unresolved, but the new species S. chelonia, S. humboldtiana, S. oceanica, and S. osseophila are phylogenetically distinct. Foliose Teloschistaceae are represented only by one species, described as Xanthomendoza leoncita, while the only fruticose species, Teloschistes chrysophthalmus and T. flavicans, are cosmopolitan.


MycoKeys ◽  
2021 ◽  
Vol 85 ◽  
pp. 57-71
Author(s):  
Taichang Mu ◽  
Zhaoxue Zhang ◽  
Rongyu Liu ◽  
Shubin Liu ◽  
Zhuang Li ◽  
...  

Colletotrichum has numerous host range and distribution. Its species are important plant pathogens, endophytes and saprobes. Colletotrichum can cause regular or irregular depressions and necrotic lesions in the epidermal tissues of plants. During this research Colletotrichum specimens were collected from Mengyin County, Shandong Province, China. A multi-locus phylogenetic analysis of ITS, GAPDH, CHS-1, ACT, TUB2, CAL and GS sequence data combined with morphology, revealed a new species and two known species, viz. C. mengyinense sp. nov., C. gloeosporioides and C. pandanicola, belonging to the C. gloeosporioides species complex. The new species is described and illustrated in this paper and compared with taxa in the C. gloeosporioides species complex.


2017 ◽  
Vol 26 (2) ◽  
pp. 294-306 ◽  
Author(s):  
P. Rosa

Colpopyga Semenov, 1954, a chrysidid genus of the tribe Elampini (Chrysididae: Chrysidinae) with four Palaearctic and one Nearctic species, is reviewed. The study of internal urites (Noskiewicz & Lorencova, 1963) and new molecular data (Niehuis, pers. comm.) show a generic status of Colpopyga, which is more related to the genus Holopyga Dahlbom, 1854. A new species, Colpopyga nesterovi sp. nov. from Kazakhstan, is described and illustrated; it is easily recognizable by the red-coppery body coloration and shallow, small and sparse punctures. The status of the subspecies Hedychridium flavipes temperatum Linsenmaier, 1959 is updated to species level in the genus Colpopyga (comb. nov.). New generic combinations are also proposed for C. aureiventris (Mercet, 1904), comb. nov. and C. crassa (Bohart, 1978), comb. nov. (all from the genus Hedychridium). The lectotype of Hedychridium flavipes var. cyanomaculatum Trautmann, 1927 is designated.


Mycotaxon ◽  
2021 ◽  
Vol 136 (2) ◽  
pp. 361-372
Author(s):  
Sana Jabeen ◽  
Zainab ◽  
Hira Bashir ◽  
Abdul Nasir Khalid

A new species, Pseudosperma albobrunneum, is described and illustrated. The specimens are from different areas of Khyber Pakhtunkhwa province, Pakistan. The identification is based on morphological characters, in combination with molecular phylogenetic analysis of sequences of the ITS region of nuclear ribosomal DNA. The species is found distinct morphologically from all closely related taxa, and molecular data confirm its novelty.


Phytotaxa ◽  
2020 ◽  
Vol 442 (3) ◽  
pp. 196-204 ◽  
Author(s):  
YAN-FENG SONG ◽  
MENG LI ◽  
BO XU ◽  
SHUI-FEI CHEN ◽  
LIN CHEN ◽  
...  

Stellaria multipartita sp. nov. (Caryophyllaceae) from Chongqing, China, is described and illustrated based on morphological and molecular data. The new species is similar to S. radians by the palmately fimbriate petals with more linear divisions. Different characters are: shape of the leaves (oblong-triangular to ovate-triangular vs. oblong-lanceolate to ovate-lanceolate in S. radians), petals (10–12-cleft vs. 5–7-cleft in S. radians), and seeds (with mamillate ornamentation vs. scrobiculate ornamentation in S. radians). A molecular phylogenetic analysis supports the recognition of Chongqing population as a new species for science.


Phytotaxa ◽  
2017 ◽  
Vol 317 (1) ◽  
pp. 53 ◽  
Author(s):  
TERRY D. MACFARLANE ◽  
DMITRY D. SOKOLOFF ◽  
MARGARITA V. REMIZOWA

During recent decades, Althenia with two species in Eurasia and Africa was accepted as one of four genera of submerged aquatics comprising the family Zannichelliaceae. Molecular phylogenetic data confirmed monophyly of Zannichelliaceae in its traditional circumscription but placed the clade together with Potamogeton and its segregate genera, so that Zannichelliaceae is currently placed in synonymy of Potamogetonaceae. Recent molecular data demonstrated that Eurasian and African species traditionally placed in Althenia s.str. are nested within the Australasian (Australia and New Zealand) Lepilaena. As a result, the two genera were combined under the name Althenia s.l. The present study describes a new species, A. hearnii T. Macfarlane & D.D. Sokoloff from southwestern Western Australia which fills a morphological gap between species traditionally placed in Althenia s.str. and Lepilaena, thus supporting molecular phylogenetic evidence for lumping the two genera. The new species has a polysymmetric circular stigma like Althenia s.str. but 12-sporangiate anther like most species traditionally classified in Lepilaena. Like some other Australian species, Althenia hearnii is dioecious with dimorphic male and female inflorescences. The dimorphism includes the presence of a ligule in leaves within male inflorescences and the absence of a ligule in leaves within female inflorescences as well as strong differences in internode length between male and female inflorescences. A new combination Althenia patentifolia (E.L. Robertson) T. Macfarlane & D.D. Sokoloff is also made in order to allow Althenia to be fully applied in Australia. A revised key to the species of Althenia is provided.


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