Efficient orthogonal functional magnetic resonance imaging designs in the presence of drift

2020 ◽  
pp. 096228022095387
Author(s):  
Rakhi Singh ◽  
John Stufken

To study brain activity, by measuring changes associated with the blood flow in the brain, functional magnetic resonance imaging techniques are employed. The design problem in event-related functional magnetic resonance imaging studies is to find the best sequence of stimuli to be shown to subjects for precise estimation of the brain activity. Previous analytical studies concerning optimal functional magnetic resonance imaging designs often assume a simplified model with independent errors over time. Optimal designs under this model are called g-lag orthogonal designs. Recently, it has been observed that g-lag orthogonal designs also perform well under simplified models with auto-regressive error structures. However, these models do not include drift. We investigate the performance of g-lag orthogonal designs for models that incorporate drift parameters. Identifying g-lag orthogonal designs that perform best in the presence of a drift is important because a drift is typically assumed for the analysis of event-related functional magnetic resonance imaging data.

1999 ◽  
Vol 354 (1387) ◽  
pp. 1179-1194 ◽  
Author(s):  
Alistair M. Howseman ◽  
Richard W. Bowtel

Functional magnetic resonance imaging (fMRI) is a widely used technique for generating images or maps of human brain activity. The applications of the technique are widespread in cognitive neuroscience and it is hoped they will eventually extend into clinical practice. The activation signal measured with fMRI is predicated on indirectly measuring changes in the concentration of deoxyhaemoglobin which arise from an increase in blood oxygenation in the vicinity of neuronal firing. The exact mechanisms of this blood oxygenation level dependent (BOLD) contrast are highly complex. The signal measured is dependent on both the underlying physiological events and the imaging physics. BOLD contrast, although sensitive, is not a quantifiable measure of neuronal activity. A number of different imaging techniques and parameters can be used for fMRI, the choice of which depends on the particular requirements of each functional imaging experiment. The high–speed MRI technique, echo–planar imaging provides the basis for most fMRI experiments. The problems inherent to this method and the ways in which these may be overcome are particularly important in the move towards performing functional studies on higher field MRI systems. Future developments in techniques and hardware are also likely to enhance the measurement of brain activity using MRI.


2018 ◽  
Vol 22 (1) ◽  
pp. 17-45 ◽  
Author(s):  
Leyla Loued-Khenissi ◽  
Olivia Döll ◽  
Kerstin Preuschoff

Functional magnetic resonance imaging is a galvanizing tool for behavioral scientists. It provides a means by which to see what the brain does while a person thinks, acts, or perceives, without invasive procedures. In this, fMRI affords us a relatively easy manner by which to peek under the hood of behavior and into the brain. Characterizing behavior with a neural correlate allows us to support or discard theoretical assumptions about the brain and behavior, to identify markers for individual and group differences. The increasing popularity of fMRI is facilitated by the apparent ease of data acquisition and analysis. This comes at a price: low signal-to-noise ratios, limitations in experimental design, and the difficulty in correctly applying and interpreting statistical tests are just a few of the pitfalls that have brought into question the reliability and validity of published fMRI data. Here, we aim to provide a general overview of the method, with an emphasis on fMRI and its analysis. Our goal is to provide the novice user with a comprehensive framework to get started on designing an imaging experiment in humans.


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