scholarly journals A method dealing with a large number of correlated traits in a linkage genome scan

2007 ◽  
Vol 1 (Suppl 1) ◽  
pp. S84 ◽  
Author(s):  
Tao Feng ◽  
Shuanglin Zhang ◽  
Qiuying Sha
2012 ◽  
Vol 154 (1) ◽  
pp. 19-25 ◽  
Author(s):  
V. Jandova ◽  
J. Klukowska-Rötzler ◽  
G. Dolf ◽  
J. Janda ◽  
P. Roosje ◽  
...  

Genetics ◽  
1983 ◽  
Vol 104 (1) ◽  
pp. 191-209
Author(s):  
Michael Turelli ◽  
Lev R Ginzburg

ABSTRACT Natural selection influences not only gamete frequencies in populations but also the multilocus fitness structures associated with segregating gametes. In particular, only certain patterns of multilocus fitnesses are consistent with the maintenance of stable multilocus polymorphisms. This paper offers support for the proposition that, at stable, viability-maintained, multilocus polymorphisms, the fitness of a genotype tends to increase with the number of heterozygous loci it contains. Average fitness always increases with heterozygosity at stable product equilibria (i.e., those without linkage disequilibrium) maintained by either additive or multiplicative fitness schemes. Simulations suggest that it "generally" increases for arbitrary fitness schemes. The empirical literature correlating allozyme heterozygosity with fitness-correlated traits is discussed in the light of these and other theoretical results.


Author(s):  
Muhammad Irfan Ullah ◽  
Shahzadi Mahpara ◽  
Rehana Bibi ◽  
Rahmat Ullah Shah ◽  
Rehmat Ullah ◽  
...  

Genetics ◽  
2001 ◽  
Vol 158 (1) ◽  
pp. 333-340 ◽  
Author(s):  
Isabelle Le Roy ◽  
Sylvie Tordjman ◽  
Danièle Migliore-Samour ◽  
Hervé Degrelle ◽  
Pierre L Roubertoux

Abstract Comparisons across 13 inbred strains of laboratory mice for reproductive organ (paired seminal vesicles and paired testes) weights indicated a very marked contrast between the C57BL/6By and NZB/BINJ mice. Subsequently these strains were selected to perform a quantitative genetic analysis and full genome scan for seminal vesicle and testis weights. An F2 population was generated. The quantitative genetic analyses indicated that each was linked to several genes. Sixty-six short sequences for length polymorphism were used as markers in the wide genome scan strategy. For weight of paired testes, heritability was 82.3% of the total variance and five QTL contributed to 72.8% of the total variance. Three reached a highly significant threshold (>4.5) and were mapped on chromosome X (LOD score 9.11), chromosome 4 (LOD score 5.96), chromosome 10 (LOD score 5.81); two QTL were suggested: chromosome 13 (LOD score 3.10) and chromosome 18 (LOD score 2.80). Heritability for weight of seminal vesicles was 50.7%. One QTL was mapped on chromosome 4 (LOD score 9.21) and contributed to 24.2% of the total variance. The distance of this QTL to the centromere encompassed the distance of the QTL linked with testicular weight on chromosome 4, suggesting common genetic mechanisms as expected from correlations in the F2. Both testis and seminal vesicle weights were associated with a reduction in the NZB/BINJ when this strain carried the YNPAR from CBA/H whereas the YNPAR from NZB/BINJ in the CBA/H strain did not modify reproductive organ weights, indicating that the YNPAR interacts with the non-YNPAR genes. The effects generated by this chromosomal region were significant but small in size.


2001 ◽  
Vol 268 (1472) ◽  
pp. 1113-1121 ◽  
Author(s):  
Finn Kjellberg ◽  
Emmanuelle Jousselin ◽  
Judith L. Bronstein ◽  
Aviva Patel ◽  
Jun Yokoyama ◽  
...  

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