scholarly journals Simulation from endpoint-conditioned, continuous-time Markov chains on a finite state space, with applications to molecular evolution

2009 ◽  
Vol 3 (3) ◽  
pp. 1204-1231 ◽  
Author(s):  
Asger Hobolth ◽  
Eric A. Stone
Keyword(s):  
Molecular Evolution ◽  
Markov Chains ◽  
State Space ◽  
Continuous Time ◽  
Continuous Time Markov Chains ◽  
Finite State ◽  
Finite State Space

scholarly journals Why is Kemeny’s constant a constant?

2018 ◽  
Vol 55 (4) ◽  
pp. 1025-1036 ◽  
Author(s):  
Dario Bini ◽  
Jeffrey J. Hunter ◽  
Guy Latouche ◽  
Beatrice Meini ◽  
Peter Taylor
Keyword(s):  
Markov Chains ◽  
State Space ◽  
Continuous Time ◽  
Death Process ◽  
Birth And Death Process ◽  
Finite State ◽  
Finite Markov Chains ◽  
Infinite State ◽  
Special Case ◽  
Finite State Space

Abstract In their 1960 book on finite Markov chains, Kemeny and Snell established that a certain sum is invariant. The value of this sum has become known as Kemeny’s constant. Various proofs have been given over time, some more technical than others. We give here a very simple physical justification, which extends without a hitch to continuous-time Markov chains on a finite state space. For Markov chains with denumerably infinite state space, the constant may be infinite and even if it is finite, there is no guarantee that the physical argument will hold. We show that the physical interpretation does go through for the special case of a birth-and-death process with a finite value of Kemeny’s constant.

On quasi-stationary distributions in absorbing continuous-time finite Markov chains

1967 ◽  
Vol 4 (1) ◽  
pp. 192-196 ◽  
Author(s):  
J. N. Darroch ◽  
E. Seneta
Keyword(s):  
Markov Chains ◽  
Discrete Time ◽  
Continuous Time ◽  
Present Note ◽  
Time Parameter ◽  
Stationary Distributions ◽  
Finite State ◽  
Absorbing Markov Chains ◽  
Finite Markov Chains ◽  
Finite State Space

In a recent paper, the authors have discussed the concept of quasi-stationary distributions for absorbing Markov chains having a finite state space, with the further restriction of discrete time. The purpose of the present note is to summarize the analogous results when the time parameter is continuous.

scholarly journals Conditioning an additive functional of a Markov chain to stay nonnegative. I. Survival for a long time

2005 ◽  
Vol 37 (4) ◽  
pp. 1015-1034 ◽  
Author(s):  
Saul D. Jacka ◽  
Zorana Lazic ◽  
Jon Warren
Keyword(s):  
Markov Chain ◽  
Weak Convergence ◽  
State Space ◽  
Continuous Time ◽  
Additive Functional ◽  
Finite State ◽  
Long Time ◽  
Negative Drift ◽  
Irreducible Markov Chain ◽  
Finite State Space

Let (Xt)t≥0 be a continuous-time irreducible Markov chain on a finite state space E, let v be a map v: E→ℝ\{0}, and let (φt)t≥0 be an additive functional defined by φt=∫0tv(Xs)d s. We consider the case in which the process (φt)t≥0 is oscillating and that in which (φt)t≥0 has a negative drift. In each of these cases, we condition the process (Xt,φt)t≥0 on the event that (φt)t≥0 is nonnegative until time T and prove weak convergence of the conditioned process as T→∞.

Extreme values, range and weak convergence of integrals of Markov chains

1982 ◽  
Vol 19 (02) ◽  
pp. 272-288 ◽  
Author(s):  
P. J. Brockwell ◽  
S. I. Resnick ◽  
N. Pacheco-Santiago
Keyword(s):  
Markov Chain ◽  
Weak Convergence ◽  
Markov Chains ◽  
Asymptotic Behaviour ◽  
State Space ◽  
Extreme Values ◽  
Finite State ◽  
Integral Process ◽  
Maximum Minimum ◽  
Finite State Space

A study is made of the maximum, minimum and range on [0,t] of the integral processwhereSis a finite state-space Markov chain. Approximate results are derived by establishing weak convergence of a sequence of such processes to a Wiener process. For a particular family of two-state stationary Markov chains we show that the corresponding centered integral processes exhibit the Hurst phenomenon to a remarkable degree in their pre-asymptotic behaviour.

scholarly journals Two Approaches to the Construction of Perturbation Bounds for Continuous-Time Markov Chains

Mathematics ◽  
2020 ◽  
Vol 8 (2) ◽  
pp. 253 ◽  
Author(s):  
Alexander Zeifman ◽  
Victor Korolev ◽  
Yacov Satin
Keyword(s):  
Markov Chains ◽  
State Space ◽  
Continuous Time ◽  
Countable State Space ◽  
Perturbation Bounds ◽  
Queuing Models ◽  
Continuous Time Markov Chains ◽  
Quantitative Estimates ◽  
Countable State

This paper is largely a review. It considers two main methods used to study stability and to obtain appropriate quantitative estimates of perturbations of (inhomogeneous) Markov chains with continuous time and a finite or countable state space. An approach is described to the construction of perturbation estimates for the main five classes of such chains associated with queuing models. Several specific models are considered for which the limit characteristics and perturbation bounds for admissible “perturbed” processes are calculated.

Quasi-ergodicity for non-homogeneous continuous-time Markov chains

1989 ◽  
Vol 26 (3) ◽  
pp. 643-648 ◽  
Author(s):  
A. I. Zeifman
Keyword(s):  
Differential Equation ◽  
Markov Chain ◽  
Markov Chains ◽  
State Space ◽  
Continuous Time ◽  
Sufficient Conditions ◽  
Continuous Time Markov Chain ◽  
Countable State Space ◽  
Continuous Time Markov Chains ◽  
Countable State

We consider a non-homogeneous continuous-time Markov chain X(t) with countable state space. Definitions of uniform and strong quasi-ergodicity are introduced. The forward Kolmogorov system for X(t) is considered as a differential equation in the space of sequences l1. Sufficient conditions for uniform quasi-ergodicity are deduced from this equation. We consider conditions of uniform and strong ergodicity in the case of proportional intensities.

scholarly journals Property-Driven State-Space Coarsening for Continuous Time Markov Chains

2016 ◽  
pp. 3-18 ◽  
Author(s):  
Michalis Michaelides ◽  
Dimitrios Milios ◽  
Jane Hillston ◽  
Guido Sanguinetti
Keyword(s):  
Markov Chains ◽  
State Space ◽  
Continuous Time ◽  
Continuous Time Markov Chains

scholarly journals Similar States in Continuous-Time Markov Chains

2009 ◽  
Vol 46 (02) ◽  
pp. 497-506 ◽  
Author(s):  
V. B. Yap
Keyword(s):  
Markov Chains ◽  
Continuous Time ◽  
Transition Matrix ◽  
Base Substitution ◽  
Continuous Time Markov Chain ◽  
Rate Matrix ◽  
Dna Base ◽  
Substitution Models ◽  
Finite State ◽  
Finite State Space

In a homogeneous continuous-time Markov chain on a finite state space, two states that jump to every other state with the same rate are called similar. By partitioning states into similarity classes, the algebraic derivation of the transition matrix can be simplified, using hidden holding times and lumped Markov chains. When the rate matrix is reversible, the transition matrix is explicitly related in an intuitive way to that of the lumped chain. The theory provides a unified derivation for a whole range of useful DNA base substitution models, and a number of amino acid substitution models.

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