scholarly journals Essential validation of gene trap mouse ES cell lines: a test case with the gene Ttrap

2009 ◽  
Vol 53 (7) ◽  
pp. 1045-1051 ◽  
Author(s):  
Liesbeth Vermeire ◽  
Abdelilah Ibrahimi ◽  
Thierry Voet ◽  
Lieve Umans ◽  
Kathleen Coddens ◽  
...  
Keyword(s):  
Es Cell ◽  
2005 ◽  
Vol 29 (2) ◽  
pp. 139-146 ◽  
Author(s):  
J KRAMER ◽  
C HEGERT ◽  
G HARGUS ◽  
J ROHWEDEL

2011 ◽  
Vol 1 (1) ◽  
Author(s):  
Lina S. Correa-Cerro ◽  
Yulan Piao ◽  
Alexei A. Sharov ◽  
Akira Nishiyama ◽  
Jean S. Cadet ◽  
...  

Blood ◽  
2004 ◽  
Vol 104 (11) ◽  
pp. 5267-5267
Author(s):  
Zwi N. Berneman ◽  
Jeremy P. Brown ◽  
Sjaak Van der Sar ◽  
Dave Van den Plas ◽  
Lena Van den Eeden ◽  
...  

Abstract BACKGROUND: Development of efficient non-viral gene transfer technologies for embryonic stem (ES) cells is urgently needed for various existing and new ES cell-based research strategies. In this study we investigated mRNA electroporation as a tool for short-term gene transfer in both mouse and human ES cells. METHODS: Culture and mRNA electroporation conditions for feeder-free cultured mouse and human ES cells were optimized on three mouse ES cell lines (E14, R1 and HM-1) and one human ES cell line (H9). After electroporation with EGFP mRNA, transfected ES cell populations were analyzed by FACS for EGFP expression, viability and phenotype. Also, stably-transfected mouse ES cell lines containing Lox-P or FRT-flanked reporter genes were electroporated with mRNA encoding Cre- or FLPe-recombinase proteins. Monitoring recombination efficiency was done based on the appearance and/or disappearance of fluorescent reporter genes, as determined by FACS analysis. ES cells that underwent recombination were further analyzed for potential to differentiate towards the neural lineage and differentiated cells were analyzed by FACS for expression of neural markers. RESULTS: (A) Electroporation of EGFP mRNA in mouse ES cells resulted in high level transgene expression (>90% EGFP positive cells) combined with low electroporation-induced cell mortality (>90% viable cells). Moreover, the electroporation procedure did not influence ES cell phenotype and further cell culture of undifferentiated ES cell populations. Electroporation of mRNA encoding Cre- or FLPe-recombinase proteins in stably-transfected mouse ES cell lines containing LoxP- or FRT-flanked reporter genes resulted in a recombination efficiency of respectively 75% and 90%. Moreover, these recombination events did not have influence on ES cell phenotype, viability, growth potential, and their ability to differentiate towards neural cell types upon retinoic acid stimulation. (B) Although human ES cells are much more sensitive as compared to mouse ES cells, we were able to develop improved culture and electroporation conditions for feeder-free maintained H9 human ES cells, which resulted in high level transgene expression (>90% EGFP+ cells) combined with high cell viability (>90% viable cells) after EGFP mRNA electroporation. CONCLUSIONS: RNA electroporation is a highly efficient method for short-term genetic loading of both mouse and human ES cells. Ongoing research now focuses on either short-term (via direct mRNA electroporation) or sustained (via mRNA-based FLPe-recombination) expression of transcription factors in ES cells and their influence on cell-fate within in vitro cultured embryoid bodies.


Blood ◽  
2004 ◽  
Vol 104 (11) ◽  
pp. 1259-1259
Author(s):  
Charlie Mantel ◽  
Ying Guo ◽  
Hirohiko Shibayama ◽  
Seiji Fukuda ◽  
Mervin C. Yoder ◽  
...  

Abstract Chromosomal replication and cell division are inherently genotoxic processes, especially in rapidly proliferating cells like ES cell lines and expanding hematopoietic stem/progenitors. Metazoan animals have a very efficient system to ensure genome fidelity. It is comprised of two interdependent branches. First are cell cycle checkpoints that detect genetic damage and delay cell cycle progression to allow time for repair. Second is apoptosis, an orderly elimination of cells damaged beyond the capability to be repaired. Defects in either of these branches contribute to spontaneous tumorigenesis and genetic instability. Evidence exists in various species that checkpoint signals are transient. Down-regulation of these cell cycle delaying signals occurs after repair, called “recovery”, or without repair, called “adaptation”. However, there is no clear evidence of checkpoint adaptation reported in mammals. Mouse ES cell lines (mES) are highly unstable, genetically and epigenetically, but the mechanism of this genetic infidelity is unknown. It is controversial whether human ES cell lines are likewise unstable, but an understanding of the mechanisms of instability in mouse model mES could be useful. Here, for the first time, we provide evidence of checkpoint adaptation in genomically stressed mES. There is failure of the checkpoint adaptation branch of genome surveillance to activate the apoptosis branch, resulting in aberrant cell cycle progression and polyploidy/aneuploidy. Treatment of E14, R1, CCE, or JSR mES with nocodazole, taxol, or etoposide induced polyploidization (8N DNA content) in as much as 50% of cells measured by bivariate flow analysis of phosphorylation of histone H3 and DNA content. This was accompanied by a low level (12–15%) of apoptosis measured by intracellular activated caspase-3. Moreover, caspase-3 was not activated in polyploid cells. This situation is reversed during embryoid body formation and differentiation to various lineages including primitive hematopoietic cells. Etoposide treatment resulted in nearly total cell death. Importantly, no polyploidization occurred, and the cells apoptose from 4N (not 8N). A screen of activation state (site-specific phosphorylation) of 10 DNA-damage checkpoint-relevant signaling intermediates (including pCHK1, pCDC25c, pCDC2, p53) suggested that all were phosphorylated by etoposide, indicating that damage was detected and the cell cycle was suspended as in somatic cells. Thus the checkpoint branch may not be responsible for apoptosis failure. This pattern of checkpoint adaptation, failure to initiate apoptosis, and polyploidization is mimicked in highly differentiated, pre-B lymphocyte cell line, Ba/F3, by suppressing apoptosis via Survivin or Anamorsin overexpression. Overexpression of Survivin resulted in 4-fold decreased etoposide-induced apoptosis concomitant with 4-fold increased polyploidy. Taxol caused similar results. We suggest that undifferentiated mES are insensitive to genotoxic-stress-induced cell death because of checkpoint adaptation without apoptosis as the endpoint. This could be due to uncoupling of the two branches of the genome-surveillance system. Uncoupling could be a mechanism for spontaneous genetic instability in mES and may have implications for human ES cell lines, cancer-linked genetic instability, and ex-vivo expanded HSCs.


2021 ◽  
Vol 14 (2) ◽  
pp. dmm047803
Author(s):  
Jens Hansen ◽  
Harald von Melchner ◽  
Wolfgang Wurst

ABSTRACTGene trapping is a high-throughput approach that has been used to introduce insertional mutations into the genome of mouse embryonic stem (ES) cells. It is performed with generic gene trap vectors that simultaneously mutate and report the expression of the endogenous gene at the site of insertion and provide a DNA sequence tag for the rapid identification of the disrupted gene. Large-scale international efforts assembled a gene trap library of 566,554 ES cell lines with single gene trap integrations distributed throughout the genome. Here, we re-investigated this unique library and identified mutations in 2202 non-coding RNA (ncRNA) genes, in addition to mutations in 12,078 distinct protein-coding genes. Moreover, we found certain types of gene trap vectors preferentially integrating into genes expressing specific long non-coding RNA (lncRNA) biotypes. Together with all other gene-trapped ES cell lines, lncRNA gene-trapped ES cell lines are readily available for functional in vitro and in vivo studies.


2007 ◽  
Vol 27 (1) ◽  
pp. 45-52
Author(s):  
Koh-ichi Atoh ◽  
Manae S. Kurokawa ◽  
Hideshi Yoshikawa ◽  
Chieko Masuda ◽  
Erika Takada ◽  
...  

1990 ◽  
Vol 10 (12) ◽  
pp. 6755-6758
Author(s):  
B R Stanton ◽  
S W Reid ◽  
L F Parada

We have disrupted one allele of the N-myc locus in mouse embryonic stem (ES) cells by using homologous recombination techniques and have obtained germ line transmission of null N-myc ES cell lines with transmission of the null N-myc allele to the offspring. The creation of mice with a deficient N-myc allele will allow the generation of offspring bearing null N-myc alleles in both chromosomes and permit study of the role that this proto-oncogene plays in embryonic development.


1996 ◽  
Vol 13 (2) ◽  
pp. 91-98
Author(s):  
Makoto Osonoi ◽  
Sang-Yong Kim ◽  
Jutaro Takahashi ◽  
Yasuhisa Yasuda

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