Phenotypic and molecular determination of anthracnose disease resistance in Lake Van Basin’s bean genotypes (Phaseolus vulgaris L.)

2016 ◽  
Author(s):  
Aytekin EKINCIALP ◽  
Suat SENSOY
Keyword(s):  
Molecular Markers ◽  
Colletotrichum Lindemuthianum ◽  
Artificial Inoculation ◽  
Lake Van ◽  
Anthracnose Disease ◽  
A Value ◽  
Lake Van Basin ◽  
Bean Genotype ◽  
Resistance Markers

In this study, the resistance levels to anthracnose disease [Colletotrichum lindemuthianum (Sacc. and Magnus) Lambs. Scrib.] of 92 bean genotypes collected from different parts of the Lake Van Basin were investigated by artificial inoculation and molecular markers. The resistance levels of bean genotypes to the isolate 11# of anthracnose disease were determined by classical inoculation method in a climate chamber condition, and the presence of resistance gene related markers in bean genotypes was determined by using four SCAR primers [SAS13 (950 bp, Co-42), SC08 (910 bp, Co-4), SF10 (1072 bp, Co-10), SZ04 (567 bp, Co-6)] and one RAPD [OA181500 (1500 bp, Co-15)] primer. In the artificial inoculation, the bean genotypes were evaluated according to the 0-9 scale, and the four of them having a value between 0 and 3 were found as resistant to this isolate of anthracnose, but the rest of them having a value between 4 and 9 were determined as sensitive. With molecular markers, it was found that the 82 bean genotypes had the resistant Co-42 allele; the 54 bean genotypes had the resistant Co-4 allele; the 6 bean genotypes had the resistant Co-10 allele; the 36 bean genotypes had the resistant Co-6 allele; and the 15 bean genotypes had the resistant Co-15 allele. The only bean genotype having all resistance markers was the genotype G81, whereas the bean genotypes G27, G28, G40, G76, and G86 had no resistance associated molecular markers.

scholarly journals Characterization of Mexican Isolates of Colletotrichum lindemuthianum by Using Differential Cultivars and Molecular Markers

1998 ◽  
Vol 88 (4) ◽  
pp. 292-299 ◽  
Author(s):  
Mario González ◽  
Raul Rodríguez ◽  
Maria Elena Zavala ◽  
Juan L. Jacobo ◽  
Fernando Hernández ◽  
...  
Keyword(s):  
Molecular Markers ◽  
Random Amplified Polymorphic Dna ◽  
Geographic Location ◽  
Genetic Distances ◽  
Colletotrichum Lindemuthianum ◽  
Aflp Data ◽  
Bootstrap Analysis ◽  
Differential Cultivars ◽  
Bean Anthracnose

Differential cultivars and molecular markers were used to analyze 59 isolates of the bean anthracnose pathogen, Colletotrichum lindemuthianum, from different regions of Mexico. Ten distinct races were determined, three of which had not been reported previously in Mexico. Isolates were found to infect only a narrow range of the differential cultivars used and were restricted to cultivars of Middle American origin. A comparison of random amplified polymorphic DNA and amplified fragment length polymorphism (AFLP) analyses was carried out on a subset of the fungal isolates. Determination of genetic distances based on AFLP data and production of a dendrogram demonstrated two levels of association: i) isolates classified into two major groups according to the type of cultivar or system of cultivation from which they originated, and ii) isolates could be classified into smaller subgroups generally associated with the geographic location from which they were obtained. Bootstrap analysis and determination of confidence intervals showed these geographic groupings to be extremely robust.

scholarly journals Identification of Races of Colletotrichum lindemuthianum with the Aid of PCR-Based Molecular Markers

Plant Disease ◽  
1998 ◽  
Vol 82 (10) ◽  
pp. 1084-1087 ◽  
Author(s):  
A. G. G. Mesquita ◽  
T. J. Paula ◽  
M. A. Moreira ◽  
E. G. de Barros
Keyword(s):  
Molecular Markers ◽  
Pcr Amplification ◽  
Genetic Distances ◽  
Colletotrichum Lindemuthianum ◽  
Chain Reaction ◽  
Bulked Dna ◽  
Symptom Evaluation ◽  
Polymerase Chain

Inoculation of a common bean differential series is the usual method for identification of races of Colletotrichum lindemuthianum. This procedure is extremely useful for phytopathological as well as breeding purposes, but it requires strict control of the number of spores and incubation conditions. Furthermore, this method may result in misclassifications of isolates because of the subjectivity of symptom evaluation. We propose the use of DNA-based molecular markers as an auxiliary tool to aid the classification of races of C. lindemuthianum. Specific DNA bands were identified for races 73, 65, and 64 by polymerase chain reaction (PCR) amplification of bulked DNA samples from isolates of these three races with random primers. The presence of these bands was checked on four isolates previously classified by inoculation on a differential series as belonging to races 23, 72, 79, and 585. The molecular procedure showed that two of these isolates had been misclassified, confirming the high potential of the proposed procedure to aid the identification of races of C. lindemuthianum. Amplification products obtained with 44 different primers also allowed the determination of the genetic distances among isolates from races 73, 65, and 64. These data were used to cluster the isolates into three groups that coincide with the ones obtained by inoculation.

Determination of Salinity Tolerance Levels of Melon Genotypes Collected from Lake Van Basin

2005 ◽  
Vol 5 (5) ◽  
pp. 637-642 ◽  
Author(s):  
Suat ensoy . ◽  
Onder Turkmen . ◽  
Turgay Kabay . ◽  
Ceknas Erd nc . ◽  
Metin Turan . ◽  
...  
Keyword(s):  
Salinity Tolerance ◽  
Lake Van ◽  
Lake Van Basin

Vitamin A Value of Plant Food Provitamin A - Evaluated by the Stable Isotope Technologies

2014 ◽  
Vol 84 (Supplement 1) ◽  
pp. 25-29 ◽  
Author(s):  
Guangwen Tang
Keyword(s):  
Stable Isotope ◽  
Vitamin A ◽  
Provitamin A ◽  
Animal Origin ◽  
Plant Food ◽  
Plant Foods ◽  
A Value ◽  
Provitamin A Carotenoids ◽  
Β Carotene

Humans need vitamin A and obtain essential vitamin A by conversion of plant foods rich in provitamin A and/or absorption of preformed vitamin A from foods of animal origin. The determination of the vitamin A value of plant foods rich in provitamin A is important but has challenges. The aim of this paper is to review the progress over last 80 years following the discovery on the conversion of β-carotene to vitamin A and the various techniques including stable isotope technologies that have been developed to determine vitamin A values of plant provitamin A (mainly β-carotene). These include applications from using radioactive β-carotene and vitamin A, depletion-repletion with vitamin A and β-carotene, and measuring postprandial chylomicron fractions after feeding a β-carotene rich diet, to using stable isotopes as tracers to follow the absorption and conversion of plant food provitamin A carotenoids (mainly β-carotene) in humans. These approaches have greatly promoted our understanding of the absorption and conversion of β-carotene to vitamin A. Stable isotope labeled plant foods are useful for determining the overall bioavailability of provitamin A carotenoids from specific foods. Locally obtained plant foods can provide vitamin A and prevent deficiency of vitamin A, a remaining worldwide concern.

scholarly journals Temperature Dependence of G and D’ Phonons in Monolayer to Few-Layer Graphene with Vacancies

2020 ◽  
Vol 15 (1) ◽  
Author(s):  
Mingming Yang ◽  
Longlong Wang ◽  
Xiaofen Qiao ◽  
Yi Liu ◽  
Yufan Liu ◽  
...  
Keyword(s):  
Negative Temperature Coefficient ◽  
Negative Temperature ◽  
Intrinsic Properties ◽  
Temperature Dependent ◽  
Phonon Interaction ◽  
Electron Phonon Interaction ◽  
Layer Graphene ◽  
A Value ◽  
Few Layer Graphene

Abstract The defects into the hexagonal network of a sp2-hybridized carbon atom have been demonstrated to have a significant influence on intrinsic properties of graphene systems. In this paper, we presented a study of temperature-dependent Raman spectra of G peak and D’ band at low temperatures from 78 to 318 K in defective monolayer to few-layer graphene induced by ion C+ bombardment under the determination of vacancy uniformity. Defects lead to the increase of the negative temperature coefficient of G peak, with a value almost identical to that of D’ band. However, the variation of frequency and linewidth of G peak with layer number is contrary to D’ band. It derives from the related electron-phonon interaction in G and D’ phonon in the disorder-induced Raman scattering process. Our results are helpful to understand the mechanism of temperature-dependent phonons in graphene-based materials and provide valuable information on thermal properties of defects for the application of graphene-based devices.

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