scholarly journals Use of BioFire FilmArray gastrointestinal PCR panel associated with reductions in antibiotic use, time to optimal antibiotics, and length of stay.

2020 ◽  
Author(s):  
Daisy Torres-Miranda ◽  
Hana Akselrod ◽  
Ryan Karsner ◽  
Alessandra Secco ◽  
Diana Silva-Cantillo ◽  
...  

Abstract BACKGROUND: Rapid and accurate diagnostic tools are needed for appropriate management of infectious diarrhea. METHODS: We evaluated the impact of the introduction of rapid multiplex PCR testing using the FilmArray gastrointestinal (GI) panel (BioFire Diagnostics, LLC, Salt Lake City, UT) at our institution, and compared the results to those of standard stool cultures. RESULTS: The most common pathogens detected by the FilmArray GI panel were Clostridium difficile (55.0%), Campylobacter species (20.9%), Salmonella species (12.4%), and Shigella/EIEC species (12.4%). Rates of reproducibility in stool culture for these pathogens ranged from 56.3% to 77.8%. Co-detection of two or more organisms was common (24.2%), most commonly involving EPEC, EAEC, ETEC, and STEC. The time from arrival in the Emergency Department to discharge or admission to the hospital was unchanged after the introduction of FilmArray GI panel, but length of hospital stay was shorter (3 vs. 7.5 days, p=0.0002) for the FilmArray group. The time to empiric antibiotics did not differ significantly, but optimal antibiotics were started earlier after introduction of the FilmArray GI panel (hospital day 1 vs. 2, p<0.0001). More patients were discharged without antibiotics after introduction of the FilmArray GI panel (14.0% vs. 4.5%; p<0.001). CONCLUSION: Our results demonstrate that the FilmArray GI panel is an important tool for improving both patient care and antibiotic stewardship, despite the tendency for positive results with multiple pathogens.

2020 ◽  
Author(s):  
Daisy Torres-Miranda ◽  
Hana Akselrod ◽  
Ryan Karsner ◽  
Alessandra Secco ◽  
Diana Silva-Cantillo ◽  
...  

Abstract Rapid and accurate diagnostic tools are needed for appropriate management of infectious diarrhea. We evaluated the impact of the introduction of rapid multiplex PCR testing using the FilmArray gastrointestinal (GI) panel (BioFire Diagnostics, LLC, Salt Lake City, UT) at our institution, and compared the results to those of standard stool cultures. The most common pathogens detected by the FilmArray GI panel were Clostridium difficile (55.0%), Campylobacter species (20.9%), Salmonella species (12.4%), and Shigella/EIEC species (12.4%). Rates of reproducibility in stool culture for these pathogens ranged from 56.3% to 77.8%. Co-detection of two or more organisms was common (24.2%), most commonly involving EPEC, EAEC, ETEC, and STEC. The time from arrival in the Emergency Department to discharge or admission to the hospital was unchanged after the introduction of FilmArray GI panel, but length of hospital stay was shorter (3 vs. 7.5 days, p=0.0002) for the FilmArray group. The time to empiric antibiotics did not differ significantly, but optimal antibiotics were started earlier after introduction of the FilmArray GI panel (hospital day 1 vs. 2, p<0.0001). More patients were discharged without antibiotics after introduction of the FilmArray GI panel (14.0% vs. 4.5%; p<0.001). Our results demonstrate that the FilmArray GI panel is an important tool for improving both patient care and antibiotic stewardship, despite the tendency for positive results with multiple pathogens.


2018 ◽  
Vol 56 (5) ◽  
Author(s):  
Şiran Keske ◽  
Burak Zabun ◽  
Kahraman Aksoy ◽  
Füsun Can ◽  
Erhan Palaoğlu ◽  
...  

ABSTRACT We aimed to detect the etiological agents of acute diarrhea by a molecular gastrointestinal pathogen test (MGPT) and to assess the impact of MGPT on antimicrobial stewardship programs (ASP). This is a prospective observational study and was conducted between 1 January 2015 and 30 June 2017. We included consequent patients who had acute diarrhea. At the end of 2015, we implemented ASP in acute diarrhea cases and compared the outcomes in the pre-ASP and post-ASP periods. An FDA-cleared multiplexed gastrointestinal PCR panel system, the BioFire FilmArray (Idaho Technology, Salt Lake City, UT), which detects 20 pathogens in stool, was used. In 499 out of 699 patients (71%), at least one pathogen was detected. Among 314 adults with positive MGPT, 101 (32%) enteropathogenic Escherichia coli (EPEC), 71 (23%) enteroaggregative E. coli (EAEC), 68 (22%) enterotoxigenic E. coli (ETEC), 55 (18%) Shiga toxin-producing E. coli (STEC) (17%) Norovirus , 48 (15%) Campylobacter , 21 (7%) Salmonella , and 20 (6%) Clostridium difficile strains were detected. Among 185 children, 55 (30%) EPEC, 37 (20%) C. difficile , 32 (17%) Norovirus , 29 (16%) EAEC, 22 (12%) STEC, 21 (11%) ETEC, 21 (11%) Campylobacter , 20 (11%) Salmonella , and 16 (5%) Rotavirus strains were detected. Inappropriate antibiotic use decreased in the post-ASP period compared with the pre-ASP period among inpatients (42.9% and 25.8%, respectively; P = 0.023). Using MGPT in clinical practice significantly decreased the unnecessary use of antibiotics. Detection of high rates of C. difficile in children and Salmonella spp., as well as relatively high rates of Campylobacter spp., which were hard to isolate by routine stool culture, were remarkable.


2017 ◽  
Vol 56 (3) ◽  
Author(s):  
Matthew M. Hitchcock ◽  
Carlos A. Gomez ◽  
Niaz Banaei

ABSTRACTThe FilmArray GI panel (BioFire Diagnostics, Salt Lake City, UT) is a multiplex, on-demand, sample-to-answer, real-time PCR assay for the syndromic diagnosis of infectious gastroenteritis that has become widely adopted and, in some instances, has replaced conventional stool culture and parasite exams. Conventional testing has historically been restricted among hospitalized patients due to low diagnostic yield, but it is not known whether use of the FilmArray GI panel should be circumscribed. Cary-Blair stool samples submitted for FilmArray GI panel in adult patients admitted to an academic hospital from August 2015 to January 2017 were included in this study. Of 481 tests performed >72 h after admission, 29 (6.0%) were positive, all for a single target, excludingClostridium difficile. When follow-up tests beyond the first positive per hospitalization were excluded, 20 (4.8%) of 414 tests were positive. There was no difference in yield by immune status. Most targets detected were viral (79% of all positives [n= 23] and 70% in unique patients [n= 14]). All four cases positive for a bacterial target could not be confirmed and presentation was atypical, suggesting possible false positives. After removing potential false positives and chronic viral shedders, the yield was 3.0% (12/406). Repeat testing performed >72 h after admission and following a negative result within the first 72 h was done in 19 patients and 100% (22/22) remained negative. The FilmArray GI panel has low yield in adult patients hospitalized for >72 h, similar to conventional stool microbiology tests, and it is reasonable to restrict its use in this population.


2012 ◽  
Vol 47 (3) ◽  
pp. 286-306 ◽  
Author(s):  
Michael Atkinson ◽  
Kevin Young

Since the early 2000s, there has been a groundswell of research on terrorism and sports mega-events, including investigations into the impact of ‘9/11’ on fear and risk management strategies at high profile sports events. In this article, we re-examine the case of the Salt Lake City Winter Games of 2002 around Baudrillard’s (1995) concept of the ‘non-event’. We compare the (largely British and North American) mass mediation and discursive framing of terrorism at the 2002 Games with subsequent discourses interwoven into accounts of terrorism, fear and security at the 2004 Summer Olympic Games in Athens and the 2006 Winter Olympic Games in Turin. Of principal interest is the global framing of sports mega-events as targets of terrorism and the ways in which such events become fabricated zones of risk. To understand why there is a lingering media construction of the sports mega-event as an imagined target (and, in many ways, pre-constructed victim) of terrorism, we draw centrally on Baudrillard’s work (1995, 2001, 2002a, 2002b). Specifically, we employ Baudrillard’s concepts of the hyperreal and the non-event as a means of exploring terrorism’s relationship with sport, and the potential usage of such theoretical ideas in the sociology of sport and physical culture more broadly.


2020 ◽  
Vol 44 (165) ◽  
pp. 41-56
Author(s):  
Darragh Gannon

AbstractWriting in Nationalist revolutionaries in Ireland, 1858–1928, Tom Garvin observed that ‘well over 40 per cent, perhaps 50 per cent, had lived outside Ireland for considerable periods … foreign experience was very important in the development of the leaders’. The impact of ‘foreign experience’ on leading nationalist revolutionaries, this article submits, pace Garvin, could have proved influential in the development of the Irish Revolution more widely. Between June 1919 and December 1920, Éamon de Valera toured the United States. From New York City to Salt Lake City, Alabama to Montana, the self-proclaimed president of the Irish republic addressed ‘Ireland’ in hundreds of interviews and speeches. Of these myriad public statements, his Cuban missive, notably, crossed national boundaries. Comparing Ireland's geo-strategic relationship with Great Britain to that of Cuba and the United States, de Valera's argument for an independent Irish republic was made in the Americas. How did de Valera's movement across the U.S. alter his political views of Ireland? How were presentations of de Valera's ‘Cuban policy’ mediated across the ‘Irish world’? How did discourse on the Monroe Doctrine inform Anglo-Irish negotiations between Truce and Treaty? Exploring de Valera's ‘Cuban policy’ as global case study, this article concludes, ultimately, can shift the historiographical significance of ‘foreign experience’ from nationalist revolutionaries in Ireland to the flows and circulation of transnational revolution.


Author(s):  
Stephen M. Lucich ◽  
Amanda D. Smith

This research estimates the achievable CO2 emissions reductions for a medium sized office building located in Salt Lake City, Utah. Four strategies that required minor retrofits or changes to a building’s operational controls were considered: automatic window shading, changes in window construction, lighting intensity, and temperature setpoint adjustment. Since 70% of energy consumed by the building sector is for heating, cooling and lighting, the methods introduced were targeted to reduce these sources of demand. The model building used was selected from the U.S. DOE’s commercial reference buildings. The simulations were run using the DOE’s EnergyPlus building energy modeling software and a TMY3 weather data file for Salt Lake City. The effect of these possible building changes on energy consumption and the CO2 emissions resulting from the production of this energy were examined. The impact of the automatic window shade was the lowest of the strategies considered with a 1% reduction in GHG emissions. This is likely the result of a low solar irradiation area to building volume ratio and should be explored for smaller residential and commercial buildings. Window construction was more promising with GHG emissions reductions between 2% and 6%. Lighting strategies and altered temperature set points demonstrated GHG emissions reduction of up to 15%. This research establishes a technique to evaluate building emissions reductions with respect to location, building construction, and operation.


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