Escherichia Coli O157:H7: Distribution, molecular characterization, antimicrobial resistance patterns and source of contamination of sheep and goat carcasses at an export Abattoir, Mojdo, Ethiopia

Abstract Background : Cattle have been identified as a major reservoir of E. coli O157:H7 for human infection; the ecology of the organism in sheep and goats is less understood. This study was carried out to determine prevalence, source of infection, antibiotic resistance and molecular characterization of Escherichia coli O157: H7 isolated from sheep and goat. Methods : Systematic random sampling was carried out at Modjo export abattoir, Ethiopia, from November 2012 to April 2013 to collect 408 samples from 72 sheep and 32 goats. Samples collected were skin swabs, fecal samples, intestinal mucosal swabs and the inside and outside part of carcasses as well as carcass in contacts such as workers hands, knife, hook and carcass washing water. Then, samples were processed following standard bacteriological procedures. Non-Sorbitol fermenting colonies were tested on latex agglutination test and the positives are subjected to PCR for detection of attaching and effacing genes ( eaeA) and shiga toxin producing genes ( stx1 and stx2 ). All E. coli O157:H7 isolates were checked for their susceptibility pattern towards 15 selected antibiotics. Results : E. coli O157:H7 were detected in only 20/408 samples (4.9%). Among these 20 positive samples, 70% (14/20), 25% (5/20) and 5% (1/20) were from sheep, goats and knife samples, respectively. No significant associations were found between carcasses and the assumed sources of contaminations. Of all the 20 isolates virulence genes were found in 10 (50%) of them; 3 (15%) with only the eaeA gene and 7(35%) expressing eaeA and stx2 genes. All the isolates were susceptible to Norfloxacin (NOR) (100%). Conclusions : The presence of virulence genes shows E. coli O157:H7 is a potential source of human infection in Ethiopia. Key words : Abattoir, antibiotic sensitivity, CT-SMAC, E. coli O157:H7, IMS, Latex agglutination, multiplex PCR.

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Escherichia Coli O157:H7: Distribution, molecular characterization, antimicrobial resistance patterns and source of contamination of sheep and goat carcasses at an export Abattoir, Mojdo, Ethiopia

10.21203/rs.2.9605/v3 ◽

2019 ◽

Cited By ~ 1

Author(s):

Solomon Abreham ◽

Akafete Teklu ◽

Eric Cox ◽

Tesfaye Sisay Tessema

Keyword(s):

Escherichia Coli ◽

Molecular Characterization ◽

Virulence Genes ◽

Antibiotic Sensitivity ◽

Latex Agglutination ◽

Human Infection ◽

Escherichia Coli O157 ◽

E Coli ◽

Source Of Infection ◽

Resistance Patterns

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Escherichia coli O157:H7: distribution, molecular characterization, antimicrobial resistance patterns and source of contamination of sheep and goat carcasses at an export abattoir, Mojdo, Ethiopia

BMC Microbiology ◽

10.1186/s12866-019-1590-8 ◽

2019 ◽

Vol 19 (1) ◽

Cited By ~ 5

Author(s):

Solomon Abreham ◽

Akafete Teklu ◽

Eric Cox ◽

Tesfaye Sisay Tessema

Keyword(s):

Escherichia Coli ◽

Molecular Characterization ◽

Virulence Genes ◽

Latex Agglutination ◽

Human Infection ◽

Systematic Random Sampling ◽

E Coli ◽

Source Of Infection ◽

Resistance Patterns

Abstract Background Cattle have been identified as a major reservoir of E. coli O157:H7 for human infection; the ecology of the organism in sheep and goats is less understood. This study was carried out to determine prevalence, source of infection, antibiotic resistance and molecular characterization of Escherichia coli O157: H7 isolated from sheep and goat. Methods Systematic random sampling was carried out at Modjo export abattoir, Ethiopia, from November 2012 to April 2013 to collect 408 samples from 72 sheep and 32 goats. Samples collected were skin swabs, fecal samples, intestinal mucosal swabs and the inside and outside part of carcasses as well as carcass in contacts such as workers hands, knife, hook and carcass washing water. Then, samples were processed following standard bacteriological procedures. Non-Sorbitol fermenting colonies were tested on latex agglutination test and the positives are subjected to PCR for detection of attaching and effacing genes (eaeA) and shiga toxin producing genes (stx1 and stx2). All E. coli O157:H7 isolates were checked for their susceptibility pattern towards 15 selected antibiotics. Results E. coli O157:H7 were detected in only 20/408 samples (4.9%). Among these 20 positive samples, 70% (14/20), 25% (5/20) and 5% (1/20) were from sheep, goats and knife samples, respectively. No significant associations were found between carcasses and the assumed sources of contaminations. Of all the 20 isolates virulence genes were found in 10 (50%) of them; 3 (15%) with only the eaeA gene and 7(35%) expressing eaeA and stx2 genes. All the isolates were susceptible to Norfloxacin (NOR) (100%). Conclusions The presence of virulence genes shows E. coli O157:H7 is a potential source of human infection in Ethiopia.

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Escherichia Coli O157:H7: Distribution, molecular characterization, antimicrobial resistance patterns and source of contamination of sheep and goat carcasses at an export Abattoir, Mojdo, Ethiopia

10.21203/rs.2.9605/v1 ◽

2019 ◽

Author(s):

Solomon Abreham ◽

Akafete Teklu ◽

Eric Cox ◽

Tesfaye Sisay Tessema

Keyword(s):

Escherichia Coli ◽

Molecular Characterization ◽

Latex Agglutination ◽

Human Infection ◽

Escherichia Coli O157 ◽

Systematic Random Sampling ◽

E Coli ◽

Source Of Infection ◽

Resistance Patterns

Abstract Background: Cattle have been identified as a major reservoir of E. coli O157:H7 for human infection; the ecology of the organism in sheep and goats is less understood. This study was carried out to determine prevalence, source of infection, antibiotic resistance and molecular characterization of Escherichia coli O157: H7 isolated from sheep and goat. Methods: Systematic random sampling was carried out at Modjo export abattoir, Ethiopia, from November 2012 to April 2013 to collect 408 samples from 72 sheep and 32 goats. Samples collected were skin swabs, fecal samples, intestinal mucosal swabs and the inside and outside part of carcasses as well as carcass in contacts such as workers hands, knife, hook and carcass washing water. Then, samples were processed following standard bacteriological procedures. Non-Sorbitol fermenting colonies were tested on latex agglutination test and the positives are subjected to PCR for detection of attaching and effacing genes (eae) and shiga toxin producing genes (stx 1 and stx 2). All E. coli O157:H7 isolates were checked for their susceptibility pattern towards 15 selected antibiotics. Results: E. coli O157:H7 were detected in only 20/408 samples (4.9%). Among these 20 positive samples, 70% (14/20), 25% (5/20) and 5% (1/20) were from sheep, goats and knife samples, respectively. No significant associations were found between carcasses and the assumed sources of contaminations. Of all the 20 isolates virulent genes were found in 10 (50%) of them; 3 (15%) with only the eaeA gene and 7(35%) expressing eaeA and stx 2 genes. All the isolates were susceptible to Norfloxacin (NOR) (100%). Conclusions: The presence of virulent genes shows E. coli O157:H7 is a potential source of human infection in Ethiopia.

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Escherichia Coli O157:H7: Distribution, molecular characterization, antimicrobial resistance patterns and source of contamination of sheep and goat carcasses at an export Abattoir, Mojdo, Ethiopia

10.21203/rs.2.9605/v2 ◽

2019 ◽

Author(s):

Solomon Abreham ◽

Akafete Teklu ◽

Eric Cox ◽

Tesfaye Sisay Tessema

Keyword(s):

Escherichia Coli ◽

Molecular Characterization ◽

Latex Agglutination ◽

Human Infection ◽

Escherichia Coli O157 ◽

Systematic Random Sampling ◽

E Coli ◽

Source Of Infection ◽

Resistance Patterns

Abstract Background: Cattle have been identified as a major reservoir of E. coli O157:H7 for human infection; the ecology of the organism in sheep and goats is less understood. This study was carried out to determine prevalence, source of infection, antibiotic resistance and molecular characterization of Escherichia coli O157: H7 isolated from sheep and goat. Methods: Systematic random sampling was carried out at Modjo export abattoir, Ethiopia, from November 2012 to April 2013 to collect 408 samples from 72 sheep and 32 goats. Samples collected were skin swabs, fecal samples, intestinal mucosal swabs and the inside and outside part of carcasses as well as carcass in contacts such as workers hands, knife, hook and carcass washing water. Then, samples were processed following standard bacteriological procedures. Non-Sorbitol fermenting colonies were tested on latex agglutination test and the positives are subjected to PCR for detection of attaching and effacing genes (eae) and shiga toxin producing genes (stx 1 and stx 2). All E. coli O157:H7 isolates were checked for their susceptibility pattern towards 15 selected antibiotics. Results: E. coli O157:H7 were detected in only 20/408 samples (4.9%). Among these 20 positive samples, 70% (14/20), 25% (5/20) and 5% (1/20) were from sheep, goats and knife samples, respectively. No significant associations were found between carcasses and the assumed sources of contaminations. Of all the 20 isolates virulent genes were found in 10 (50%) of them; 3 (15%) with only the eaeA gene and 7(35%) expressing eaeA and stx 2 genes. All the isolates were susceptible to Norfloxacin (NOR) (100%). Conclusions: The presence of virulent genes shows E. coli O157:H7 is a potential source of human infection in Ethiopia.

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Virulence Characterization and Molecular Subtyping of Typical and Atypical Escherichia coli O157:H7 and O157:H(−) Isolated from Fecal Samples and Beef Carcasses in Mexico

Journal of Food Protection ◽

10.4315/0362-028x.jfp-14-348 ◽

2015 ◽

Vol 78 (2) ◽

pp. 264-272 ◽

Cited By ~ 4

Author(s):

CLAUDIA NARVÁEZ-BRAVO ◽

ALEJANDRO ECHEVERRY ◽

MARKUS F. MILLER ◽

ARGENIS RODAS-GONZÁLEZ ◽

M. TODD BRASHEARS ◽

...

Keyword(s):

Escherichia Coli ◽

Virulence Genes ◽

Immunomagnetic Separation ◽

Latex Agglutination ◽

Escherichia Coli O157 ◽

High Genetic Diversity ◽

E Coli ◽

System A ◽

Metabolic Genes ◽

Beef Carcasses

The objective of the study was to characterize virulence genes and subtype Escherichia coli O157:H7 and O157:H(−) isolates obtained from a vertically integrated feedlot slaughter plant in Mexico. A total of 1,695 samples were collected from feedlots, holding pens, colon contents, hides, and carcasses. E. coli O157:H7 detection and confirmation was carried out using conventional microbiology techniques, immunomagnetic separation, latex agglutination, and the BAX system. A total of 97 E. coli O157 strains were recovered and screened for key virulence and metabolic genes using multiplex and conventional PCR. Eighty-eight (91.72%) of the strains carried stx2, eae, and ehxA genes. Ten isolates (8.25%) were atypical sorbitol-fermenting strains, and nine were negative for the flicH7 gene and lacked eae, stx1, stx2, and ehxA. One sorbitol-positive strain carried stx2, eae, tir, toxB, and iha genes but was negative for stx1 and ehxA. Pulsed-field gel electrophoresis (PFGE) analysis yielded 49 different PFGE subtypes, showing a high genetic diversity; however, the majority of the typical isolates were closely related (80 to 90% cutoff). Atypical O157 isolates were not closely related within them or to typical E. coli O157:H7 isolates. Identical PFGE subtypes were found in samples obtained from colon contents, feedlots, holding pens, and carcasses. Isolation of a sorbitol-fermenting E. coli O157 positive for a number of virulence genes is a novel finding in Mexico. These data showed that genetically similar strains of E. coli O157:H7 can be found at various stages of beef production and highlights the importance of preventing cross-contamination at the pre- and postharvest stages of processing.

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Comparison between human and animal isolates of Shiga toxin-producing Escherichia coli O157 from Australia

Epidemiology and Infection ◽

10.1017/s0950268801006689 ◽

2002 ◽

Vol 128 (3) ◽

pp. 357-362 ◽

Cited By ~ 17

Author(s):

N. FEGAN ◽

P. DESMARCHELIER

Keyword(s):

Escherichia Coli ◽

Shiga Toxin ◽

Human Infection ◽

Pulsed Field Gel Electrophoresis ◽

Toxin Gene ◽

Escherichia Coli O157 ◽

Animal Population ◽

E Coli ◽

Virulence Markers ◽

Animal Isolates

There is very little human disease associated with enterohaemorrhagic Escherichia coli O157 in Australia even though these organisms are present in the animal population. A group of Australian isolates of E. coli O157:H7 and O157:H- from human and animal sources were tested for the presence of virulence markers and compared by XbaI DNA macrorestriction analysis using pulsed-field gel electrophoresis (PFGE). Each of 102 isolates tested contained the gene eae which encodes the E. coli attaching and effacing factor and all but one carried the enterohaemolysin gene, ehxA, found on the EHEC plasmid. The most common Shiga toxin gene carried was stx2c, either alone (16%) or in combination with stx1 (74%) or stx2 (3%). PFGE grouped the isolates based on H serotype and some clusters were source specific. Australian E. coli O157:H7 and H- isolates from human, animal and meat sources carry all the virulence markers associated with EHEC disease in humans therefore other factors must be responsible for the low rates of human infection in Australia.

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Prevalence of shiga toxin-producing Escherichia coli O157, O26 and O111 in milk, meat and faeces of cattle, sheep and pigs slaughtered in Benin

Journal of Applied Biosciences ◽

10.35759/jabs.152.6 ◽

2020 ◽

Vol 152 ◽

pp. 15667-15675

Author(s):

Chakirath Folakè Arikè Salifou ◽

Cyrille Boko ◽

Isidore Houaga ◽

Raoul Agossa ◽

Isabelle Ogbankotan ◽

...

Keyword(s):

Escherichia Coli ◽

Shiga Toxin ◽

Virulence Genes ◽

Animal Origin ◽

Escherichia Coli O157 ◽

E Coli ◽

Milk Samples ◽

Food Of Animal Origin ◽

Cattle Faeces ◽

Risk Assessment And Management

Objectives: The study aimed to search for E. coli O157 and non-O157 in milk, meat and faeces of cattle, sheep and pigs slaughtered in Cotonou. Methodology and Results: One hundred and Seventy-Five (175) samples including 25 meat, 25 faeces per species and 25 milk from cattle were analysed for E. coli O157; O26 and O111 and the virulence genes were identified by PCR. The SAS software (1998) and the bilateral Z test were used to calculate and compare the identification frequencies. E. coli O157 was identified in 4% of cattle faeces, 4% of sheep faeces, and 20% of beef and, in 20% of milk samples. E. coli O26 was identified in 12% of cattle faeces and, in 8% of beef samples. E. coli O111 was identified at frequencies of 8%, and 12% in faeces of sheep and pigs, respectively. The eae gene was detected in 4% of beef, ovine meat, milk, pig faeces and in sheep faeces. stx1 was detected in 8% of milk, and in 4% of bovine and sheep faeces. The strains possessing the gene were all of E. coli O157 with the exception of one from pig faeces identified as O111. Conclusions and application of findings: The presence of these serogroups of E. coli with virulence genes poses a real food safety problem in Benin. This study findings must be taken into account for risk assessment and management related to the consumption of food of animal origin. Keywords: Benin, E. coli O157, O26, O111, faeces, meat, milk

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Lymphoid Follicle-Dense Mucosa at the Terminal Rectum Is the Principal Site of Colonization of Enterohemorrhagic Escherichia coli O157:H7 in the Bovine Host

Infection and Immunity ◽

10.1128/iai.71.3.1505-1512.2003 ◽

2003 ◽

Vol 71 (3) ◽

pp. 1505-1512 ◽

Cited By ~ 369

Author(s):

Stuart W. Naylor ◽

J. Christopher Low ◽

Thomas E. Besser ◽

Arvind Mahajan ◽

George J. Gunn ◽

...

Keyword(s):

Escherichia Coli ◽

Primary Source ◽

Detailed Examination ◽

Lymphoid Follicle ◽

Enterohemorrhagic Escherichia Coli ◽

Escherichia Coli O157 ◽

Associated Bacteria ◽

E Coli ◽

Source Of Infection ◽

Specific Distribution

ABSTRACT Escherichia coli O157:H7 causes bloody diarrhea and potentially fatal systemic sequelae in humans. Cattle are most frequently identified as the primary source of infection, and E. coli O157:H7 generally colonizes the gastrointestinal tracts of cattle without causing disease. In this study, persistence and tropism were assessed for four different E. coli O157:H7 strains. Experimentally infected calves shed the organism for at least 14 days prior to necropsy. For the majority of these animals, as well as for a naturally colonized animal obtained from a commercial beef farm, the highest numbers of E. coli O157:H7 were found in the feces, with negative or significantly lower levels detected in lumen contents taken from the gastrointestinal tract. Detailed examination demonstrated that in these individuals the majority of tissue-associated bacteria were adherent to mucosal epithelium within a defined region extending up to 5 cm proximally from the recto-anal junction. The tissue targeted by E. coli O157:H7 was characterized by a high density of lymphoid follicles. Microcolonies of the bacterium were readily detected on the epithelium of this region by immunofluorescence microscopy. As a consequence of this specific distribution, E. coli O157:H7 was present predominately on the surface of the fecal stool. In contrast, other E. coli serotypes were present at consistent levels throughout the large intestine and were equally distributed in the stool. This is a novel tropism that may enhance dissemination both between animals and from animals to humans. The accessibility of this site may facilitate simple intervention strategies.

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Escherichia coli O157[ratio ]H7 infection of calves: infectious dose and direct contact transmission

Epidemiology and Infection ◽

10.1017/s095026880100615x ◽

2001 ◽

Vol 127 (3) ◽

pp. 555-560 ◽

Cited By ~ 92

Author(s):

T. E. BESSER ◽

B. L. RICHARDS ◽

D. H. RICE ◽

D. D. HANCOCK

Keyword(s):

Escherichia Coli ◽

Direct Contact ◽

Reservoir Host ◽

Human Infection ◽

Escherichia Coli O157 ◽

Faecal Excretion ◽

Infectious Dose ◽

E Coli ◽

Electrophoretic Patterns ◽

Contact Transmission

Cattle are considered to be a reservoir host of Escherichia coli O157[ratio ]H7 and contaminated foods of bovine origin are important vehicles of human infection. In this study, the susceptibility of calves to experimental E. coli O157[ratio ]H7 infection following low oral exposures was determined. Two of 17 calves exposed to very low (<300 c.f.u.) doses, and 3 of 4 calves exposed to low (<10000 c.f.u.) doses, subsequently excreted the challenge strains in their faeces. All calves (n = 12) sharing isolation rooms with calves that excreted the challenge strain in their faeces similarly began faecal excretion of the same strains within 21 days or less. The identity between the challenge strains and the strains excreted in calf faeces was confirmed by restriction digestion electrophoretic patterns using pulsed field gel electrophoresis. Calves shed E. coli O157[ratio ]H7 in their faeces after very low dose exposures at concentrations ranging from <30 to >107 c.f.u./g, and for durations similar to the values previously reported for calves challenged by larger doses. The susceptibility of calves to infection following very low exposures or direct contact with infected calves has important implications for programmes for pre-harvest control of this agent.

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Use of In Vivo-Induced Antigen Technology for Identification of Escherichia coli O157:H7 Proteins Expressed during Human Infection

Infection and Immunity ◽

10.1128/iai.73.5.2665-2679.2005 ◽

2005 ◽

Vol 73 (5) ◽

pp. 2665-2679 ◽

Cited By ~ 48

Author(s):

Manohar John ◽

Indira T. Kudva ◽

Robert W. Griffin ◽

Allen W. Dodson ◽

Bethany McManus ◽

...

Keyword(s):

Escherichia Coli ◽

Vaccine Development ◽

Human Infection ◽

Escherichia Coli O157 ◽

Standard Laboratory ◽

E Coli ◽

Phase Culture ◽

Stool Specimens

ABSTRACT Using in vivo-induced antigen technology (IVIAT), a modified immunoscreening technique that circumvents the need for animal models, we directly identified immunogenic Escherichia coli O157:H7 (O157) proteins expressed either specifically during human infection but not during growth under standard laboratory conditions or at significantly higher levels in vivo than in vitro. IVIAT identified 223 O157 proteins expressed during human infection, several of which were unique to this study. These in vivo-induced (ivi) proteins, encoded by ivi genes, mapped to the backbone, O islands (OIs), and pO157. Lack of in vitro expression of O157-specific ivi proteins was confirmed by proteomic analysis of a mid-exponential-phase culture of E. coli O157 grown in LB broth. Because ivi proteins are expressed in response to specific cues during infection and might help pathogens adapt to and counter hostile in vivo environments, those identified in this study are potential targets for drug and vaccine development. Also, such proteins may be exploited as markers of O157 infection in stool specimens.

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