scholarly journals ITS Sequence Analysis of Ophidascaris Baylisi from Burmese Pythons

Author(s):  
Qi Zhao ◽  
Asmaa Abuzeid ◽  
Tingting Zhuang ◽  
Long He ◽  
Jumei Liu ◽  
...  

Abstract Members of genus Ophidascaris are common parasitic roundworms in snakes that cause gastric granulomas, adenocarcinomas, intestinal obstruction, death, and serious economic losses in snakes and their products. To identify molecular marker of Ophidascaris baylisi from the Burmese python (Python molurus bivittatus), we amplified internal transcribed spacer (ITS) sequence from this roundworm and analyzed their homology and phylogeny. The amplified ITS sequence length was 1140 bp, comprising the complete ITS1, 5.8S, and ITS2 sequences and a partial 28S sequence. The ITS1+ sequence was homologous (85.8% homology) to the related species Ophidascaris robertsi. The phylogenetic tree revealed a close genetic distance between O. baylisi and O. robertsi, which formed a separate branch within family Ascaridae clade. The results indicated that the identified ITS sequence could be a good molecular marker for further study on the molecular classification and genetic variation of Ophidascaris species.

Plant Disease ◽  
2021 ◽  
Author(s):  
Junxia Lei ◽  
yuxiao Gao ◽  
Wasi Ullah Khan ◽  
Hong Li ◽  
Xiang Ma ◽  
...  

Areca catechu L. (areca) belongs to the Arecaceae family, which is composed of 181 genera and 2,600 species (Christenhusz and Byng 2016), is cultivated extensively in Southern and Southeastern Asia (Peng et al. 2015). Areca has a long history for its important economic and medicinal benefits and is one of the most important commercial crops in Hainan province, China. In recent years, root rot and stem rot diseases have occurred, causing areca plants to wither and even die. The serious symptoms mainly appeared in the Hainan province (Li et al. 2006). In March 2018, the rotten tissues of the diseased plants were observed to become brittle, brown, and even black from the stem base to the root; the outer leaves turned yellow, dry, and dropping in areca plantations of Qionghai county. The disease can spread from individual plants to the whole plantation in one to two years, with the characteristics of large-scale occurrence and rapid transmission, causing huge economic losses. Diseased tissues (5 × 5 mm) were disinfected with 75% ethanol for 30 s, 1% HgCl2 for 1 min, washed in sterile water, placed on potato dextrose agar (PDA) medium and incubated at 28°C (Gao et al. 2019). Pure isolates were obtained by transferring the mycelium around the diseased tissues to PDA several times. The colonies were white and cottony after culturing for 7 days. The reverse side of the colony was yellowish white. Basidiospores were hyaline, thin-walled, smooth, 1.7-1.8 x 1.6-1.7 μm (n=30) in size and circular or ellipse in shape, in addition to a dimitic hyphal system (Das et al. 2017). For molecular identification, the genomic DNA of the isolate was extracted using the thermolysis method (Zhang et al. 2010). The ribosomal internal transcribed spacer (ITS) region was amplified using the primer pairs ITS1/ITS4 (White et al. 1990), and the amplified DNA fragments were sequenced. The obtained ITS sequence (GenBank accession No. MW534416) had 99.36% identity with the reference sequence (GenBank accession No. KX013157) of Grammothele lineata Berk. & M.A. Curtis. A phylogenetic tree was constructed with software MEGA7 using the neighbor-joining method, showing that the isolate was grouped in the same clade as G. lineata. To fulfil Koch’s postulates, a pathogenicity test was performed using the stems of 6-month-old healthy areca seedlings. Stem surfaces were sterilized with 70% ethanol for 30 s, rinsed three times with sterile water, and gently stabbed with a sterile needle, and then inoculated with a 1-cm-diameter colonized PDA disk from a 7-day culture on wounds, moistened with wet cotton, and wrapped with a fresh plastic wrap. Plants inoculated with sterile PDA medium plugs were used as a control. The inoculation assay was carried out twice, with five plants in both control and treatment in each test. After 20 days, the stems of the plants inoculated with the pathogen exhibited rotten symptoms, and the leaves began to become yellow and shrunken, while the control plants had only the surface of the stems discolored slightly and the inner tissue was undamaged. The fungus was re-isolated from the infected stems. Based on the morphological observations and ITS sequence analysis, the isolate was identified as G. lineata. As far as we know, this is the first report of G. lineata causing the stem rot of areca in China.


2015 ◽  
Vol 282 (1805) ◽  
pp. 20150120 ◽  
Author(s):  
Robert A. McCleery ◽  
Adia Sovie ◽  
Robert N. Reed ◽  
Mark W. Cunningham ◽  
Margaret E. Hunter ◽  
...  

To address the ongoing debate over the impact of invasive species on native terrestrial wildlife, we conducted a large-scale experiment to test the hypothesis that invasive Burmese pythons ( Python molurus bivittatus ) were a cause of the precipitous decline of mammals in Everglades National Park (ENP). Evidence linking pythons to mammal declines has been indirect and there are reasons to question whether pythons, or any predator, could have caused the precipitous declines seen across a range of mammalian functional groups. Experimentally manipulating marsh rabbits, we found that pythons accounted for 77% of rabbit mortalities within 11 months of their translocation to ENP and that python predation appeared to preclude the persistence of rabbit populations in ENP. On control sites, outside of the park, no rabbits were killed by pythons and 71% of attributable marsh rabbit mortalities were classified as mammal predations. Burmese pythons pose a serious threat to the faunal communities and ecological functioning of the Greater Everglades Ecosystem, which will probably spread as python populations expand their range.


2007 ◽  
Vol 174 (3) ◽  
pp. 669-672 ◽  
Author(s):  
Rosario Preziosi ◽  
Alessia Diana ◽  
Daniela Florio ◽  
Andrea Gustinelli ◽  
Giordano Nardini

2012 ◽  
Vol 2012 ◽  
pp. 1-5 ◽  
Author(s):  
Victor Olusegun Oyetayo

Molecular identification of eighteenTermitomycesspecies collected from two states, Ondo and Ekiti in Nigeria was carried out using the internal transcribed spacer (ITS) region. The amplicons obtained from rDNA ofTermitomycesspecies were compared with existing sequences in the NCBI GenBank. The results of the ITS sequence analysis discriminated between all theTermitomycesspecies (obtained from Ondo and Ekiti States) andTermitomycessp. sequences obtained from NCBI GenBank. The degree of similarity of T1 to T18 to gene ofTermitomycessp. obtained from NCBI ranges between 82 and 99 percent.Termitomycesspecies from Garbon with ascension number AF321374 was the closest relative of T1 to T18 except T12 that has T. eurhizus and T. striatus as the closet relative. Phylogenetic tree generated with ITS sequences obtained from NCBI GenBank data revealed that T1 to T18 are more related toTermitomycesspecies indigenous to African countries such as Senegal, Congo, and Gabon.


2000 ◽  
Vol 223 (3-4) ◽  
pp. 185-199 ◽  
Author(s):  
N. Garcia-Jacas ◽  
A. Susanna ◽  
V. Mozaffarian ◽  
R. Ilarslan

2020 ◽  
Vol 31 (6) ◽  
pp. 496
Author(s):  
Braulio A. Fuantos Gámez ◽  
Camilo Romero Núñez ◽  
Galia Sheinberg Waisburd ◽  
Linda G. Bautista Gómez ◽  
Enrique Yarto Jaramillo ◽  
...  

1983 ◽  
Vol 4 (1) ◽  
pp. 49-61 ◽  
Author(s):  
H.A.J. in den Bosch

AbstractThe AGA Thermovision 750® infrared measuring system is used to measure temperatures and to present thermal images of reptiles. Because the system records only the infrared that emanates from the subject itself, the process may be carried out in complete darkness. Evaporation from the wet nasal mucosal surface and the velocity and amount of air over this tissue, results in the reptiles tested having a distinctly cooler snout as compared to the other parts of the head and body. Body temperature is found to be above ambient temperature. Constriction and swallowing changes the heat distribution in Python molurus bivittatus. There is a differential increase in temperature and the cooler snout disappears. Afterwards a differential cooling of the head and body occurs and a colder spot in the anterior temporal region is noted. These phenomena are discussed; the cooler spot is attributed to the action of the anterior temporal gland. No qualitative differences in behavioural elements in feeding behaviour in dark vs light are observed. In the general feeding pattern the action ofappression is interpreted as hearing, and snout pushing after swallowing, as a putting back in place ofjaw and skull elements. The hypothesis that temperature differences over the dead prey (mouse) are of importance in head searching is investigated. A clear heat gradient persisting long enough to be of use to heat-sensitive snakes is found.


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