Application of LFER to pKas and Dipole Moments of 1H and 2H Tautomers of Tetrazole: Mimicking Structure-Function Relation as a Chemical Education Perspective

Author(s):  
Sanjeev Rachuru ◽  
Jagannadham Vandanapu

Structure-function relation is a 155 year old concept to explain the dependence of biological activity of a drug molecule on its structure put forward by Crum-Brown and Fraser*. Similar line of interest is followed in the present work, and it stimulates the understanding of structure-activity relation (SAR) among the graduate students. An attempt is made for the first time from our laboratory to apply the Hammett and Taft equations to a five membered ring system with four nitrogens as heteroatoms viz. tetrazole to identify the aqueous medium 1H and 2H Tautomers. For this purpose experimentally determined aqueous medium pKa values of NH-acidities of a total of fifteen 5-X-1,2,3,4-tetrazoles and DFT/B3LYP method at the 6-31G* level calculated dipole moments of seven 1H and 2H tautomers of 5-X-1,2,3,4-tetrazoles are used to correlate with Hammett para and meta, and Taft _ortho^* values. Good correlations are obtained. The promising response of more abundant and more polar 1H tautomer with less susceptibility (* = -1.38 in pKa correlations and * = -0.55 in dipole moments correlation) to Taft equation and less abundant and less polar 2H tautomer with more susceptibility (para = 6.56, meta = 7.79 in pKa correlations, and para = 2.69, meta = 3.26 in dipole moments correlation) to Hammett equation of the tetrazole is well distinguished. Thus it mimics a principle of structure-function study on a chemical property like the ionization of NH proton of tetrazole and on a physical property like dipole moment for the first time. Therefore finding a way is achieved to get the equilibrium identification of 1H and 2H tautomers without using any expensive and time consuming experimental techniques.

Planta Medica ◽  
2011 ◽  
Vol 77 (12) ◽  
Author(s):  
J Usta ◽  
K Racha ◽  
K Boushra ◽  
S Shatha ◽  
B Yolla ◽  
...  

Author(s):  
Ravinder Sharma ◽  
Pooja A. Chawla ◽  
Viney Chawla ◽  
Rajeev Verma ◽  
Nandita Nawal ◽  
...  

Abstract: A sizeable proportion of currently marketed drugs come from heterocycles. The heterocyclic moiety 5-pyrazolone is well known five membered ring containing nitrogen. Derivatives of this wonder nucleus have exhibited activities as diverse as antimicrobial, anti-inflammatory, analgesic, antidepressant, anticonvulsant, antidiabetic, antihyperlipidemic, antiviral, antitubercular, antioxidant, anticancer and antiviral including action against severe acute respiratory syndrome (SARS) or 3C protease inhibitor. A number of drugs based on this motif have already made it to the market. Standard texts and literature on medicinal chemistry cite different approaches for the synthesis of 5-pyrazolones. The present review provides an insight view to 5-pyrazolone synthesis, their biological profile and structure activity relationship studies.


2018 ◽  
Vol 34 (5) ◽  
pp. 2361-2369
Author(s):  
Herlina Rasyid ◽  
Bambang Purwono ◽  
Ria Armunanto

Quantitative structure-activity relationship (QSAR) based on electronic descriptors had been conducted on 2,3-dihydro-[1,4]dioxino[2,3-f]quinazoline analogues as anticancer using DFT/B3LYP method. The best QSAR equation described as follow: Log IC50 = -11.688 + (-35.522×qC6) + (-21.055×qC10) + (-85.682×qC12) + (-32.997×qO22) + (-85.129 EHOMO) + (19.724×ELUMO). Statistical value of R2 = 0.8732, rm2 = 0.7935, r2-r02/r2 = 0.0118, PRESS = 1.5727 and Fcalc/Ftable = 2.4067 used as external validation. Atomic net charge showed as the most important descriptor to predict activity and design new molecule. Following QSAR analysis, Lipinski rules was applied to filter the design compound due to physicochemical properties and resulted that all filtered compounds did not violate the rules. Docking analysis was conducted to determine interaction between proposed compounds and EGFR protein. Critical hydrogen bond was found in Met769 residue suggesting that proposed compounds could be used to inhibit EGFR protein.


IAWA Journal ◽  
2014 ◽  
Vol 35 (1) ◽  
pp. 12-18
Author(s):  
Alessandra Ribeiro Guimarães ◽  
José Fernando A. Baumgratz ◽  
Ricardo Cardoso Vieira

For the first time, the occurrence of reticulate perforation plates in Melastomataceae is reported. They were discovered in the course of a study of the wood anatomy of the tribe Microlicieae. The occurrence and frequency of the types of plates are discussed with respect to their structure, function, and environment. The reticulate perforation plates seem to be the result of parallel evolution. Some speculations are offered about their possible adaptive value.


2008 ◽  
Vol 64 (6) ◽  
pp. 713-724 ◽  
Author(s):  
Florence Porcher ◽  
Elena Borissenko ◽  
Mohamed Souhassou ◽  
Masaki Takata ◽  
Kenichi Kato ◽  
...  

The crystal structure of a new phase consisting of the inclusion of the hyperpolarizable molecule p-N,N-dimethylnitroaniline (dimethyl-para-nitroaniline or dmpNA) in the large-pore zeolite mordenite (MOR) has been determined from high-resolution synchrotron powder diffraction at 300 and 90 K. The unit-cell parameters and space group at 300 K are similar to those of as-synthesized mordenite. The crystallographic study indicates that the MOR straight channels are almost fully loaded with molecules that are disordered over eight symmetry-related sites. As expected, the molecules are located in the large 12-membered ring channel, at the intersection with the secondary eight-membered channel with which they might form hydrogen bonds. The elongation axes (and then the dipole moments) of the molecules are slightly tilted (28.57°) from [001]. The configuration found suggests an interaction of dmpNA with framework O atoms through its methyl groups.


2010 ◽  
Vol 09 (01) ◽  
pp. 219-231 ◽  
Author(s):  
XIAODONG LIU ◽  
YONGQING QIU ◽  
SHILING SUN ◽  
CHUNGUANG LIU ◽  
ZHONGMIN SU

DFT B3LYP method was employed to calculate the second-order nonlinear optical (NLO) responses of the derivatives of disubstituted seven-vertex cobaltacarborane metallocenyl. The results show that cobaltacarborane metallocenyl plays a pushing/pulling role and a bridge role to transfer electron in these molecules. The five-membered ring of cyclopentadiene is more beneficial to increase second-order NLO response than the five-membered ring composed of two C atoms and three B atoms in cobaltacarborane. Moreover, the second-order NLO response is more powerful when one substituent containing electron donor group and one substituent containing electron acceptor group are located at meta position. Accordingly, among the nine models, model c2 is the optimum model with largest value of βtot. The calculation results also show that cobaltacarborane metallocenyl and ferrocene parts play the same roles to increase second-order NLO response. Thus, cobaltacarborane metallocenyl can be a promising second-order NLO material.


2019 ◽  
Vol 15 ◽  
pp. 535-541
Author(s):  
Frank Wesche ◽  
Hélène Adihou ◽  
Thomas A Wichelhaus ◽  
Helge B Bode

The repeated and improper use of antibiotics had led to an increased number of multiresistant bacteria. Therefore, new lead structures are needed. Here, the synthesis and an expanded structure–activity relationship of the simple and antistaphylococcal amide nematophin from Xenorhabdus nematophila and synthetic derivatives are described. Moreover, the synthesis of intrinsic fluorescent derivatives, incorporating azaindole moieties was achieved for the first time.


2020 ◽  
Vol 598 (20) ◽  
pp. 4603-4619 ◽  
Author(s):  
Martijn C. Sierksma ◽  
Johan A. Slotman ◽  
Adriaan B. Houtsmuller ◽  
J. Gerard G. Borst

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