scholarly journals The FAIRness of data management plans: an assessment of some European DMPs

RECIIS ◽  
2021 ◽  
Vol 15 (3) ◽  
Author(s):  
Patricia Henning ◽  
Luis Olavo Bonino Da Silva ◽  
Luís Ferreira Pires ◽  
Marten Van Sinderen ◽  
João Luís Rebelo Moreira
Keyword(s):  
Best Practices ◽  
Data Management ◽  
Research Policy ◽  
Management Plan ◽  
Scientific Data ◽  
Funding Agencies ◽  
Address Data ◽  
Management Plans ◽  
Data Stewardship ◽  
Fair Principles

The FAIR principles have become a data management instrument for the academic and scientific community, since they provide a set of guiding principles to bring findability, accessibility, interoperability and reusability to data and metadata stewardship. Since their official publication in 2016 by Scientific Data – Nature, these principles have received worldwide recognition and have been quickly endorsed and adopted as a cornerstone of data stewardship and research policy. However, when put into practice, they occasionally result in organisational, legal and technological challenges that can lead to doubts and uncertainty as to whether the effort of implementing them is worthwhile. Soon after their publication, the European Commission and other funding agencies started to require that project proposals include a Data Management Plan (DMP) based on the FAIR principles. This paper reports on the adherence of DMPs to the FAIR principles, critically evaluating ten European DMP templates. We observed that the current FAIRness of most of these DMPs is only partly satisfactory, in that they address data best practices, findability, accessibility and sometimes preservation, but pay much less attention to metadata and interoperability.

scholarly journals Plano de gestão de dados fair: uma proposta para a Fiocruz | Fair data management plan: a proposal for Fiocruz

2019 ◽  
Vol 15 (2) ◽  
Author(s):  
Viviane Santos de Oliveira Veiga ◽  
Patricia Henning ◽  
Simone Dib ◽  
Erick Penedo ◽  
Jefferson Da Costa Lima ◽  
...  
Keyword(s):  
Life Cycle ◽  
Data Management ◽  
Open Science ◽  
Management Plan ◽  
Research Data ◽  
Research Institutions ◽  
Research Data Management ◽  
Management Plans ◽  
Fair Principles

RESUMO Este artigo trás para discussão o papel dos planos de gestão de dados como instrumento facilitador da gestão dos dados durante todo o ciclo de vida da pesquisa. A abertura de dados de pesquisa é pauta prioritária nas agendas científicas, por ampliar tanto a visibilidade e transparência das investigações, como a capacidade de reprodutibilidade e reuso dos dados em novas pesquisas. Nesse contexto, os princípios FAIR, um acrônimo para ‘Findable’, ‘Accessible’, ‘Interoperable’ e ‘Reusable’ é fundamental por estabelecerem orientações basilares e norteadoras na gestão, curadoria e preservação dos dados de pesquisa direcionados para o compartilhamento e o reuso. O presente trabalho tem por objetivo apresentar uma proposta de template de Plano de Gestão de Dados, alinhado aos princípios FAIR, para a Fundação Oswaldo Cruz. A metodologia utilizada é de natureza bibliográfica e de análise documental de diversos planos de gestão de dados europeus. Concluímos que a adoção de um plano de gestão nas práticas cientificas de universidades e instituições de pesquisa é fundamental. No entanto, para tirar maior proveito dessa atividade é necessário contar com a participação de todos os atores envolvidos no processo, além disso, esse plano de gestão deve ser machine-actionable, ou seja, acionável por máquina.Palavras-chave: Plano de Gestão de Dados; Dado de Pesquisa; Princípios FAIR; PGD Acionável por Máquina; Ciência Aberta.ABSTRACT This article proposes to discuss the role of data management plans as a tool to facilitate data management during researches life cycle. Today, research data opening is a primary agenda at scientific agencies as it may boost investigations’ visibility and transparency as well as the ability to reproduce and reuse its data on new researches. Within this context, FAIR principles, an acronym for Findable, Accessible, Interoperable and Reusable, is paramount, as it establishes basic and guiding orientations for research data management, curatorship and preservation with an intent on its sharing and reuse. The current work intends to present to the Fundação Oswaldo Cruz a new Data Management Plan template proposal, aligned with FAIR principles. The methodology used is bibliographical research and documental analysis of several European data management plans. We conclude that the adoption of a management plan on universities and research institutions scientific activities is paramount. However, to be fully benefited from this activity, all actors involved in the process must participate, and, on top of that, this plan must be machine-actionable.Keywords: Data Management Plan; Research Data; FAIR Principles; DMP Machine-Actionable; Open Science.

scholarly journals Data Stewardship – addressing disciplinary data management needs

2018 ◽  
Author(s):  
Marta Teperek ◽  
Maria J. Cruz ◽  
Ellen Verbakel ◽  
Jasmin K. Böhmer ◽  
Alastair Dunning
Keyword(s):  
Data Management ◽  
Common Denominator ◽  
Management Support ◽  
Research Institutions ◽  
Multidisciplinary Research ◽  
University Of Technology ◽  
Address Data ◽  
Subject Specific ◽  
Data Stewardship ◽  
The Common

One of the biggest challenges for multidisciplinary research institutions which provide data management support to researchers is addressing disciplinary differences1. Centralised services need to be general enough to cater for all the different flavours of research conducted in an institution. At the same time, focusing on the common denominator means that subject-specific differences and needs may not be effectively addressed. In 2017, Delft University of Technology (TU Delft) embarked on an ambitious Data Stewardship project, aiming to comprehensively address data management needs across a multi-disciplinary campus. In this practice paper, we describe the principles behind the Data Stewardship project at TU Delft, the progress so far, we identify the key challenges and explain our plans for the future.

Exploiting SeaDataCloud Temperature and Salinity time series data collections and comparing with Copernicus - a novel approach with SOURCE tool

2020 ◽  
Author(s):  
Paolo Oliveri ◽  
SImona Simoncelli ◽  
Pierluigi DI Pietro ◽  
Sara Durante
Keyword(s):  
Time Series ◽  
Best Practices ◽  
Data Management ◽  
Time Series Data ◽  
Management Plan ◽  
Global Ocean ◽  
Series Data ◽  
Data Repository ◽  
Log File ◽  
Data Collections

<p>One of the main challenges for the present and future in ocean observations is to find best practices for data management: infrastructures like Copernicus and SeaDataCloud already take responsibility for assembly, archive, update and publish data. Here we present the strengths and weaknesses in a SeaDataCloud Temperature and Salinity time series data collections, in particular a tool able to recognize the different devices and platforms and to merge them with processed Copernicus platforms.</p><p>While Copernicus has the main target to quickly acquire and publish data, SeaDataNet aims to publish data with the best quality available. This two data repository should be considered together, since the originator can ingest the data in both the infrastructures or only in one, or partially in both. This results sometimes in data partially available in Copernicus or SeaDataCloud, with great impact for the researcher who wants to access as much data as possible. The data reprocessing should not be loaded on researchers' shoulders, since only skilled users in all data management plan know how merge the data.</p><p>The SeaDataCloud time series data collections is a Global Ocean soon-to-be-published dataset that will represent a reference for ocean researchers, released in binary, user friendly Ocean Data View format. The database management plan was originally for profiles, but had been adapted for time series, resolving several issues like the uniqueness of the identifiers (ID).</p><p>Here we present an extension of the SOURCE (Sea Observations Utility for Reprocessing. Calibration and Evaluation) Python package, able to enhance the data quality with redundant sophisticated methods and simplify their usage. </p><p>SOURCE increases quality control (Q/C) performances on observations using statistical quality check procedures that follows the ocean best practices guidelines, exploiting the following  issues:</p><ol><li>Find and aggregate all broken time series using likeness in ID parameter strings;</li> <li>Find and organize in a dictionary all different metadata variables;</li> <li>Correct time series time to match simpler measure units;</li> <li>Filter devices that are outside of a selected horizontal rectangle;</li> <li>Give some information on original Q/C scheme by SeaDataCloud infrastructure;</li> <li>Give information tables on platforms and on the merged ID string duplicates together with an errors log file (missing time, depth, data, wrong Q/C variables, etc.).</li> </ol><p>In particular, the duplicates table and the log file may be helpful to SeaDataCloud partners in order to update the data collection and make it finally available for the users.</p><p>The reconstructed SeaDataCloud time series data, divided by parameter and stored in a more flexible dataset, give the possibility to ingest it in the main part of the software, allowing to compare it with Copernicus time series, find the same platform using horizontal and vertical surroundings (without looking to ID) find and cleanup  duplicated data, merge the two databases to extend the data coverage.</p><p>This allow researchers to have the most wide and the best quality possible data for the final users release and to to use these data to calibrate and validate models, in order to reach an idea of a whole area sea conditions.</p>

scholarly journals ELIXIR Software Management Plan for Life Sciences

2021 ◽  
Author(s):  
Renato Alves ◽  
Dimitrios Bampalikis ◽  
Leyla Jael Castro ◽  
José María Fernández ◽  
Jennifer Harrow ◽  
...  
Keyword(s):  
Data Management ◽  
Open Source Software ◽  
Open Science ◽  
Management Plan ◽  
Software Management ◽  
Research Software ◽  
Management Perspective ◽  
Management Plans ◽  
Machine Readable ◽  
Future Plans

Data Management Plans are now considered a key element of Open Science. They describe the data management life cycle for the data to be collected, processed and/or generated within the lifetime of a particular project or activity. A Software Manag ement Plan (SMP) plays the same role but for software. Beyond its management perspective, the main advantage of an SMP is that it both provides clear context to the software that is being developed and raises awareness. Although there are a few SMPs already available, most of them require significant technical knowledge to be effectively used. ELIXIR has developed a low-barrier SMP, specifically tailored for life science researchers, aligned to the FAIR Research Software principles. Starting from the Four Recommendations for Open Source Software, the ELIXIR SMP was iteratively refined by surveying the practices of the community and incorporating the received feedback. Currently available as a survey, future plans of the ELIXIR SMP include a human- and machine-readable version, that can be automatically queried and connected to relevant tools and metrics within the ELIXIR Tools ecosystem and beyond.

scholarly journals Information Integration for Machine Actionable Data Management Plans

2017 ◽  
Vol 12 (1) ◽  
pp. 22-35 ◽  
Author(s):  
Tomasz Miksa ◽  
Andreas Rauber ◽  
Roman Ganguly ◽  
Paolo Budroni
Keyword(s):  
Data Management ◽  
Information Integration ◽  
Open Science ◽  
Management Plan ◽  
Reproducible Research ◽  
Free Form ◽  
Text Documents ◽  
Data Repositories ◽  
Standard Data ◽  
Management Plans

Data management plans are free-form text documents describing the data used and produced in scientific experiments. The complexity of data-driven experiments requires precise descriptions of tools and datasets used in computations to enable their reproducibility and reuse. Data management plans fall short of these requirements. In this paper, we propose machine-actionable data management plans that cover the same themes as standard data management plans, but particular sections are filled with information obtained from existing tools. We present mapping of tools from the domains of digital preservation, reproducible research, open science, and data repositories to data management plan sections. Thus, we identify the requirements for a good solution and identify its limitations. We also propose a machine-actionable data model that enables information integration. The model uses ontologies and is based on existing standards.

scholarly journals FAIR Principles for Digital Repositories: Essence and Applications for Heritage Objects

2020 ◽  
Vol 6 (1) ◽  
pp. 64-76
Author(s):  
Kalina Sotirova-Valkova ◽  
Keyword(s):  
Scientific Data ◽  
Digital Object ◽  
Industry Funding ◽  
Scientific Publications ◽  
Digital Repositories ◽  
Good Management ◽  
Funding Agencies ◽  
International Image ◽  
Fair Principles ◽  
Disparate Data

The emergence of the FAIR initiative in 2016 is based on the need for good management of disparate data, and improving the functionality of digital repositories and e-infrastructures. The aim is to promote the re-use of (scientific) data, a need recognized by academia, industry, funding agencies and memory institutions. This paper discusses the nature of the FAIR principles, its` technologies, the concept of FAIR digital object, FAIR ecosystem and persistent identifiers, a possible solution to the images-publication in scientific publications and in museum digital repositories through the International Image Interoperability Framework (IIIF), and all these through the focus of possible digital vision of the Bulgarian memory institutions. Keywords: FAIR principles, heritage, Persistent Identifiers, LOD

scholarly journals Progress on Data Stewardship Wizard during BioHackathon Europe 2020

2020 ◽  
Author(s):  
Marek Suchánek ◽  
Rob W.W. Hooft ◽  
Konogan Bourhy
Keyword(s):  
Data Management ◽  
Management Plan ◽  
Knowledge Model ◽  
Horizon 2020 ◽  
Past Time ◽  
The Past ◽  
Europe 2020 ◽  
Questions And Answers ◽  
Data Stewardship ◽  
Multiple Languages

We used the Virtual BioHackathon Europe 2020 to work on a number of projects for improvement of the data stewardship wizard: (a) We made first steps to analysis of what is needed to make all questions and answers machine actionable (b) We worked on supporting the Horizon 2020 Data Management Plan Template (c) Several new integrations were made, e.g. to ROR and Wikidata (d) we made a draft plan for supporting multiple languages and (e) we implemented many suggestions for improvement of the knowledge model that had been suggested to us over the past time. Quickly after the BioHackathon, the adapted knowledge model, new integrations and the H2020 template have been made available to all users of the wizard.

scholarly journals The Open-Specimen Movement

BioScience ◽  
2020 ◽  
Author(s):  
Jocelyn P Colella ◽  
Ryan B Stephens ◽  
Mariel L Campbell ◽  
Brooks A Kohli ◽  
Danielle J Parsons ◽  
...  
Keyword(s):  
Data Management ◽  
Open Data ◽  
Open Science ◽  
Management Plan ◽  
Scientific Data ◽  
Primary Data ◽  
Explicit Integration ◽  
Cultural Shift ◽  
Major Barrier ◽  
Annual Reporting

Abstract The open-science movement seeks to increase transparency, reproducibility, and access to scientific data. As primary data, preserved biological specimens represent records of global biodiversity critical to research, conservation, national security, and public health. However, a recent decrease in specimen preservation in public biorepositories is a major barrier to open biological science. As such, there is an urgent need for a cultural shift in the life sciences that normalizes specimen deposition in museum collections. Museums embody an open-science ethos and provide long-term research infrastructure through curation, data management and security, and community-wide access to samples and data, thereby ensuring scientific reproducibility and extension. We propose that a paradigm shift from specimen ownership to specimen stewardship can be achieved through increased open-data requirements among scientific journals and institutional requirements for specimen deposition by funding and permitting agencies, and through explicit integration of specimens into existing data management plan guidelines and annual reporting.

scholarly journals Data Management Planning: How Requirements and Solutions are Beginning to Converge

2020 ◽  
Vol 2 (1-2) ◽  
pp. 208-219 ◽  
Author(s):  
Sarah Jones ◽  
Robert Pergl ◽  
Rob Hooft ◽  
Tomasz Miksa ◽  
Robert Samors ◽  
...  
Keyword(s):  
Data Management ◽  
Driving Forces ◽  
Management Planning ◽  
Current State ◽  
Adoption And Implementation ◽  
Key Characteristics ◽  
Data Stewardship ◽  
Fair Principles ◽  
Research Workforce ◽  
Research Initiatives

Effective stewardship of data is a critical precursor to making data FAIR. The goal of this paper is to bring an overview of current state of the art of data management and data stewardship planning solutions (DMP). We begin by arguing why data management is an important vehicle supporting adoption and implementation of the FAIR principles, we describe the background, context and historical development, as well as major driving forces, being research initiatives and funders. Then we provide an overview of the current leading DMP tools in the form of a table presenting the key characteristics. Next, we elaborate on emerging common standards for DMPs, especially the topic of machine-actionable DMPs. As sound DMP is not only a precursor of FAIR data stewardship, but also an integral part of it, we discuss its positioning in the emerging FAIR tools ecosystem. Capacity building and training activities are an important ingredient in the whole effort. Although not being the primary goal of this paper, we touch also the topic of research workforce support, as tools can be just as much effective as their users are competent to use them properly. We conclude by discussing the relations of DMP to FAIR principles, as there are other important connections than just being a precursor.

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