Computational investigation of interaction between titanocene dichloride and nanoclusters (B12N12, B12P12, Al12N12 and Al12P12)

2021 ◽  
pp. 1-10
Author(s):  
Mozhdeh Shabani ◽  
Reza Ghiasi ◽  
Karim Zare ◽  
Reza Fazaeli

This study investigated the interactions between B12N12, B12P12, Al12N12 and Al12P12 nanoclusters and titanocene dichloride anticancer drug complex using B3P86 functional. The bonding interaction between the nano-clusters and anticancer drug were examined through energy decomposition analysis (EDA). A good quadratic equation between interaction energy and molar volume (Vm) were provided. Charge transfer between fragments were illustrated with electrophilicity-based charge transfer (ECT). According to calculations, the values of heat of formation of the studied systems were negative (exothermic), which shows that these molecules are thermodynamically stable. The relationship between molar refractivity (MR) and Vm presented linear correlation.

2021 ◽  
pp. 1-10
Author(s):  
Mozhdeh Shabani ◽  
Reza Ghiasi ◽  
Karim Zare ◽  
Reza Fazaeli

This study investigated the interaction between B12N12 nano-cluster and carboplatin complex using B3P86 functional. Two interaction modes between B12N12 nano-cluster and carboplatin complex were considered. The bonding interaction between the B12N12 nano-cluster and carboplatin complex was examined through energy decomposition analysis (EDA). Also, Shubin Liu’s energy decomposition analysis (EDA-SBL) is used to study the source of energy differences between various isomers of B12N12  ...  carboplatin complex. Charge transfer between fragments were illustrated with electrophilicity-based charge transfer (ECT) and extended charge decomposition analysis (ECDA). The quantum theory of atoms in molecules (QTAIM) analysis was applied to assess the Pt-B and Pt-N bonds within B12N12  ...  carboplatin complex.


2019 ◽  
Author(s):  
Brandon B. Bizzarro ◽  
Colin K. Egan ◽  
Francesco Paesani

<div> <div> <div> <p>Interaction energies of halide-water dimers, X<sup>-</sup>(H<sub>2</sub>O), and trimers, X<sup>-</sup>(H<sub>2</sub>O)<sub>2</sub>, with X = F, Cl, Br, and I, are investigated using various many-body models and exchange-correlation functionals selected across the hierarchy of density functional theory (DFT) approximations. Analysis of the results obtained with the many-body models demonstrates the need to capture important short-range interactions in the regime of large inter-molecular orbital overlap, such as charge transfer and charge penetration. Failure to reproduce these effects can lead to large deviations relative to reference data calculated at the coupled cluster level of theory. Decompositions of interaction energies carried out with the absolutely localized molecular orbital energy decomposition analysis (ALMO-EDA) method demonstrate that permanent and inductive electrostatic energies are accurately reproduced by all classes of XC functionals (from generalized gradient corrected (GGA) to hybrid and range-separated functionals), while significant variance is found for charge transfer energies predicted by different XC functionals. Since GGA and hybrid XC functionals predict the most and least attractive charge transfer energies, respectively, the large variance is likely due to the delocalization error. In this scenario, the hybrid XC functionals are then expected to provide the most accurate charge transfer energies. The sum of Pauli repulsion and dispersion energies are the most varied among the XC functionals, but it is found that a correspondence between the interaction energy and the ALMO EDA total frozen energy may be used to determine accurate estimates for these contributions. </p> </div> </div> </div>


2015 ◽  
Vol 44 (10) ◽  
pp. 3177-3211 ◽  
Author(s):  
Maximillian J. S. Phipps ◽  
Thomas Fox ◽  
Christofer S. Tautermann ◽  
Chris-Kriton Skylaris

The partitioning of the interaction energy into chemical components such as electrostatics, polarization, and charge transfer is possible with energy decomposition analysis approaches. We review and evaluate these for biomolecular applications.


2018 ◽  
Vol 20 (2) ◽  
pp. 905-915 ◽  
Author(s):  
Jonathan Thirman ◽  
Elric Engelage ◽  
Stefan M. Huber ◽  
Martin Head-Gordon

Variational energy decomposition analysis establishes charge-transfer as the origin of halogen bond strength differences that go against electrostatics.


2019 ◽  
Author(s):  
Brandon B. Bizzarro ◽  
Colin K. Egan ◽  
Francesco Paesani

<div> <div> <div> <p>Interaction energies of halide-water dimers, X<sup>-</sup>(H<sub>2</sub>O), and trimers, X<sup>-</sup>(H<sub>2</sub>O)<sub>2</sub>, with X = F, Cl, Br, and I, are investigated using various many-body models and exchange-correlation functionals selected across the hierarchy of density functional theory (DFT) approximations. Analysis of the results obtained with the many-body models demonstrates the need to capture important short-range interactions in the regime of large inter-molecular orbital overlap, such as charge transfer and charge penetration. Failure to reproduce these effects can lead to large deviations relative to reference data calculated at the coupled cluster level of theory. Decompositions of interaction energies carried out with the absolutely localized molecular orbital energy decomposition analysis (ALMO-EDA) method demonstrate that permanent and inductive electrostatic energies are accurately reproduced by all classes of XC functionals (from generalized gradient corrected (GGA) to hybrid and range-separated functionals), while significant variance is found for charge transfer energies predicted by different XC functionals. Since GGA and hybrid XC functionals predict the most and least attractive charge transfer energies, respectively, the large variance is likely due to the delocalization error. In this scenario, the hybrid XC functionals are then expected to provide the most accurate charge transfer energies. The sum of Pauli repulsion and dispersion energies are the most varied among the XC functionals, but it is found that a correspondence between the interaction energy and the ALMO EDA total frozen energy may be used to determine accurate estimates for these contributions. </p> </div> </div> </div>


2017 ◽  
Vol 16 (01) ◽  
pp. 1750007 ◽  
Author(s):  
Reza Ghiasi ◽  
Nasrin Sadeghi

This study used mpw1pw91 quantum chemical calculations in gas and solution phases to clarify the interaction between C20 and Cr(CO)5 fragment. It also sought to clarify the effects of solvent polarity on dipole moment, structural parameters, and frontier orbital energies of the complex. Energy decomposition analysis (EDA) was applied to analyze the bonding interaction between the C20 and Cr(CO)5 fragment. Percentage composition in terms of the defined groups of frontier orbitals for the complex was evaluated to characterize the metal–ligand bonds. The Cr–C bonds within the complex were examined using quantum theory of atoms in molecules (QTAIM) analysis. In order to determine the back-bonding effects in these bonds, QTAIM analysis was applied to calculate of the quadrupole polarization of the carbon atom.


2019 ◽  
Author(s):  
Matthias Loipersberger ◽  
Yuezhi Mao ◽  
Martin Head-Gordon

<div> <div> <div> <p>To facilitate the understanding of charge transfer (CT) effects in dative complexes, we propose a variational forward-backward (VFB) approach to decompose the overall CT stabilization energy into contributions from forward and backward donation in the framework of energy decomposition analysis based on absolutely localized molecular orbitals (ALMO-EDA). Such a decomposition is achieved by introducing two additional constrained intermediate states in which only one direction of CT is permitted. These two “one-way” CT states are variationally relaxed such that the associated nuclear forces can be readily obtained. This allows for a facile integration into the previously developed adiabatic EDA scheme so that the molecular property changes arising from forward and back donation can be separately assigned. Using ALMO-EDA augmented by this VFB model, we investigate the energetic, geometric, and vibrational features of complexes composed of CO and main group Lewis acids (BH3, BeO/BeCO3), and complexes of the N2, CO, and BF isoelectronic series with [Ru(II)(NH3)5]2+. We identify that the shift in the stretching frequency of a diatomic π-acidic ligand (XY), such as CO, results from a superposition of the shifts induced by permanent electrostatics and backward CT: permanent electrostatics can cause an either red or blue shift depend- ing on the alignment of the XY dipole in the dative complex, and this effect becomes more pronounced with a more polar XY ligand; the back-donation to the antibonding π orbital of XY always lowers the X−Y bond order and thus red-shifts its stretching frequency, and the strength of this interaction decays rapidly with the intermolecular distance. We also reveal that while σ forward donation contributes significantly to energetic stabilization, it affects the vibrational feature of XY mainly by shortening the intermolecular distance, which enhances both the electrostatic interaction and back- ward CT but in different rates. The synergistic effect of the forward and backward donations appears to be more significant in the transition metal complexes, where the forward CT plays an essential role in overcoming the strong Pauli repulsion. These findings highlight that the shift in the XY stretching frequency is not a reliable metric for the strength of π back-donation. Overall, the VFB-augmented EDA scheme that we propose and apply in this work provides a useful tool to characterize the role played by each physical component that all together lead to the frequency shift observed. </p> </div> </div> </div>


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