scholarly journals Opportunities and Challenges of Bacterial Glycosylation for the Development of Novel Antibacterial Strategies

2021 ◽  
Vol 12 ◽  
Author(s):  
Liubov Yakovlieva ◽  
Julius A. Fülleborn ◽  
Marthe T. C. Walvoort

Glycosylation is a ubiquitous process that is universally conserved in nature. The various products of glycosylation, such as polysaccharides, glycoproteins, and glycolipids, perform a myriad of intra- and extracellular functions. The multitude of roles performed by these molecules is reflected in the significant diversity of glycan structures and linkages found in eukaryotes and prokaryotes. Importantly, glycosylation is highly relevant for the virulence of many bacterial pathogens. Various surface-associated glycoconjugates have been identified in bacteria that promote infectious behavior and survival in the host through motility, adhesion, molecular mimicry, and immune system manipulation. Interestingly, bacterial glycosylation systems that produce these virulence factors frequently feature rare monosaccharides and unusual glycosylation mechanisms. Owing to their marked difference from human glycosylation, bacterial glycosylation systems constitute promising antibacterial targets. With the rise of antibiotic resistance and depletion of the antibiotic pipeline, novel drug targets are urgently needed. Bacteria-specific glycosylation systems are especially promising for antivirulence therapies that do not eliminate a bacterial population, but rather alleviate its pathogenesis. In this review, we describe a selection of unique glycosylation systems in bacterial pathogens and their role in bacterial homeostasis and infection, with a focus on virulence factors. In addition, recent advances to inhibit the enzymes involved in these glycosylation systems and target the bacterial glycan structures directly will be highlighted. Together, this review provides an overview of the current status and promise for the future of using bacterial glycosylation to develop novel antibacterial strategies.

2003 ◽  
Vol 31 (2) ◽  
pp. 429-432 ◽  
Author(s):  
M. van Duin ◽  
H. Woolson ◽  
D. Mallinson ◽  
D. Black

Genomics-based discovery of novel therapeutic drug targets requires the design of well-controlled biological or pharmacological experiments with experimental questions and hypotheses that relate to the therapeutic area of interest. This will aid the validation level of differentially expressed genes and hence facilitate the de-selection of the genes that are identified in microarray experiments. We here provide an example of how this approach is followed in the manipulation of human macrophage foam cells towards the discovery of novel drug targets for treatment of atherosclerosis.


2019 ◽  
Vol 24 (9) ◽  
pp. 1943-1952 ◽  
Author(s):  
Anjali Garg ◽  
Bandana Kumari ◽  
Neelja Singhal ◽  
Manish Kumar

2017 ◽  
Vol 7 (1.1) ◽  
pp. 435
Author(s):  
M Thirunavu karasu ◽  
K Dinakaran ◽  
E N. Sathishkumar ◽  
S Gnanendra

The continuous usage of antibiotics has resulted in the increase of multidrug resistance in the bacteria. The drastic increase in the bacterial genome projects has paved a path for the identification of potentially novel virulence-associated factors and their possibility as novel drug targets. Thus in the present study, we have implemented SMO classifiers for the better prediction of proteins based on individual protein sequences amino acid composition (AAC) and the performance of evaluation was checked via threshold dependent parameters such as Sensitivity, Specificity, Accuracy, and Mathew correlation coefficient. The predictions are based on the dataset incorporated in the database of five major virulence factors from six pathogens of Enterobacteriacae.This comprehensive database can serve as a source for the selection of significant virulence factor based on the intellectual Gene ontology terms that play a critical role in the pathogenesis and its surveillance in the host.


2020 ◽  
Vol 19 (5) ◽  
pp. 300-300 ◽  
Author(s):  
Sorin Avram ◽  
Liliana Halip ◽  
Ramona Curpan ◽  
Tudor I. Oprea

2017 ◽  
Vol 7 (1) ◽  
Author(s):  
Marie O. Pohl ◽  
Jessica von Recum-Knepper ◽  
Ariel Rodriguez-Frandsen ◽  
Caroline Lanz ◽  
Emilio Yángüez ◽  
...  

Author(s):  
Eamonn Morrison ◽  
Patty Wai ◽  
Andri Leonidou ◽  
Philip Bland ◽  
Saira Khalique ◽  
...  

BMC Genomics ◽  
2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Christos Dimitrakopoulos ◽  
Sravanth Kumar Hindupur ◽  
Marco Colombi ◽  
Dritan Liko ◽  
Charlotte K. Y. Ng ◽  
...  

Abstract Background Genetic aberrations in hepatocellular carcinoma (HCC) are well known, but the functional consequences of such aberrations remain poorly understood. Results Here, we explored the effect of defined genetic changes on the transcriptome, proteome and phosphoproteome in twelve tumors from an mTOR-driven hepatocellular carcinoma mouse model. Using Network-based Integration of multi-omiCS data (NetICS), we detected 74 ‘mediators’ that relay via molecular interactions the effects of genetic and miRNA expression changes. The detected mediators account for the effects of oncogenic mTOR signaling on the transcriptome, proteome and phosphoproteome. We confirmed the dysregulation of the mediators YAP1, GRB2, SIRT1, HDAC4 and LIS1 in human HCC. Conclusions This study suggests that targeting pathways such as YAP1 or GRB2 signaling and pathways regulating global histone acetylation could be beneficial in treating HCC with hyperactive mTOR signaling.


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