scholarly journals A Combined Experimental/Quantum-Chemical Study of Tetrel, Pnictogen, and Chalcogen Bonds of Linear Triatomic Molecules

Molecules ◽  
2021 ◽  
Vol 26 (22) ◽  
pp. 6767
Author(s):  
Freija De Vleeschouwer ◽  
Frank De Proft ◽  
Özge Ergün ◽  
Wouter Herrebout ◽  
Paul Geerlings

Linear triatomic molecules (CO2, N2O, and OCS) are scrutinized for their propensity to form perpendicular tetrel (CO2 and OCS) or pnictogen (N2O) bonds with Lewis bases (dimethyl ether and trimethyl amine) as compared with their tendency to form end-on chalcogen bonds. Comparison of the IR spectra of the complexes with the corresponding monomers in cryogenic solutions in liquid argon enables to determine the stoichiometry and the nature of the complexes. In the present cases, perpendicular tetrel and pnictogen 1:1 complexes are identified mainly on the basis of the lifting of the degenerate ν 2 bending mode with the appearance of both a blue and a red shift. Van ′t Hoff plots of equilibrium constants as a function of temperature lead to complexation enthalpies that, when converted to complexation energies, form the first series of experimental complexation energies on sp1 tetrel bonds in the literature, directly comparable to quantum-chemically obtained values. Their order of magnitude corresponds with what can be expected on the basis of experimental work on halogen and chalcogen bonds and previous computational work on tetrel bonds. Both the order of magnitude and sequence are in fair agreement with both CCSD(T) and DFA calculations, certainly when taking into account the small differences in complexation energies of the different complexes (often not more than a few kJ mol−1) and the experimental error. It should, however, be noted that the OCS chalcogen complexes are not identified experimentally, most probably owing to entropic effects. For a given Lewis base, the stability sequence of the complexes is first successfully interpreted via a classical electrostatic quadrupole–dipole moment model, highlighting the importance of the magnitude and sign of the quadrupole moment of the Lewis acid. This approach is validated by a subsequent analysis of the molecular electrostatic potential, scrutinizing the σ and π holes, as well as the evolution in preference for chalcogen versus tetrel bonds when passing to “higher” chalcogens in agreement with the evolution of the quadrupole moment. The energy decomposition analysis gives further support to the importance/dominance of electrostatic effects, as it turns out to be the largest attractive term in all cases considered, followed by the orbital interaction and the dispersion term. The natural orbitals for chemical valence highlight the sequence of charge transfer in the orbital interaction term, which is dominated by an electron-donating effect of the N or O lone-pair(s) of the base to the central atom of the triatomics, with its value being lower than in the case of comparable halogen bonding situations. The effect is appreciably larger for TMA, in line with its much higher basicity than DME, explaining the comparable complexation energies for DME and TMA despite the much larger dipole moment for DME.

2008 ◽  
Vol 73 (6-7) ◽  
pp. 873-897 ◽  
Author(s):  
Vladimír Špirko ◽  
Ota Bludský ◽  
Wolfgang P. Kraemer

The adiabatic three-dimensional potential energy surface and the corresponding dipole moment surface describing the ground electronic state of HN2+ (Χ1Σ+) are calculated at different levels of ab initio theory. The calculations cover the entire bound part of the potential up to its lowest dissociation channel including the isomerization barrier. Energies of all bound vibrational and low-lying ro-vibrational levels are determined in a fully variational procedure using the Suttcliffe-Tennyson Hamiltonian for triatomic molecules. They are in close agreement with the available experimental numbers. From the dipole moment function effective dipoles and transition moments are obtained for all the calculated vibrational and ro-vibrational states. Statistical tools such as the density of states or the nearest-neighbor level spacing distribution (NNSD) are applied to describe and analyse general patterns and characteristics of the energy and dipole results calculated for the massively large number of states of the strongly bound HN2+ ion and its deuterated isotopomer.


2004 ◽  
Vol 82 (1) ◽  
pp. 19-26 ◽  
Author(s):  
Xin Zhou ◽  
Ai-Min Ren ◽  
Ji-Kang Feng ◽  
Xiao-Juan Liu

The one-photon absorption (OPA) properties of tetrabenzoporphyrins (TBPs) and phthalocyanines (Pcs) were studied using the semiempirical ZINDO method and time-dependent density functional theory (TDDFT), respectively. The compared results confirmed that the semiempirical ZINDO method was reasonably reliable when calculating the OPA of tetrabenzoporphyrins and phthalocyanines. On the basis of the OPA properties obtained from the ZINDO method, two-photon absorption (TPA) properties of two series of molecules were investigated, using ZINDO and sum-over-states (SOS) methods. The results showed that the TPA cross-sections of all molecules were in the range of 220.6 × 10–50 – 345.9 × 10–50 cm4·s·photon–1, which were in the same order of magnitude as the values reported in the literature. The relatively larger δ(ω) value for Pcs with respect to that for corresponding TBPs originates from larger intramolecular charge transfer, which can be characterized by the difference of dipole moment between S0 and S1 and the transition dipole moment between S1 and S5.Key words: two-photon absorption, ZINDO, sum-over-states, tetrabenzoporphyrin, phthalocyanines.


Crystals ◽  
2022 ◽  
Vol 12 (1) ◽  
pp. 112
Author(s):  
Sławomir J. Grabowski

The MP2/aug-cc-pVTZ calculations were performed on the dihalometallylenes to indicate their Lewis acid and Lewis base sites. The results of the Cambridge Structural Database search show corresponding and related crystal structures where the tetrel center often possesses the configuration of a trigonal bipyramid or octahedron. The calculations were also carried out on dimers of dichlorogermylene and dibromogermylene and on complexes of these germylenes with one and two 1,4-dioxide molecules. The Ge⋯Cl, Ge⋯Br, and Ge⋯O interactions are analyzed. The Ge⋯O interactions in the above mentioned germylene complexes may be classified as the π-hole tetrel bonds. The MP2 calculations are supported by the results of the Quantum Theory of Atoms in Molecules (QTAIM) and the Natural Bond Orbital (NBO) approaches.


2020 ◽  
Vol 496 (2) ◽  
pp. 2183-2190
Author(s):  
S Çıkıntoğlu ◽  
S Şaşmaz Muş ◽  
K Yavuz Ekşi

ABSTRACT Millisecond magnetars are often invoked as the central engine of some gamma-ray bursts (GRBs), specifically the ones showing a plateau phase. We argue that an apparent plateau phase may not be realized if the magnetic field of the nascent magnetar is in a transient rapid decay stage. Some GRBs that lack a clear plateau phase may also be hosting millisecond magnetars. We present an approximate analytical solution of the coupled set of equations describing the evolution of the angular velocity and the inclination angle between rotation and magnetic axes of a neutron star in the presence of a corotating plasma. We also show how the solution can be generalized to the case of evolving magnetic fields. We determine the evolution of the spin period, inclination angle, magnetic dipole moment, and braking index of six putative magnetars associated with GRB 091018, GRB 070318, GRB 080430, GRB 090618, GRB 110715A, and GRB 140206A through fitting, via Bayesian analysis, the X-ray afterglow light curves by using our recent model. We find that within the first day following the formation of the millisecond magnetar, the inclination angle aligns rapidly, the magnetic dipole moment may decay by a few times, and the braking index varies by an order of magnitude.


1979 ◽  
Vol 34 (3) ◽  
pp. 369-374 ◽  
Author(s):  
M. Kunst ◽  
D. van Duijn ◽  
P. Bordewijk

Abstract Analysis of infrared hydroxyl multimer absorbances of dilute solutions of cholesterol in carbon tetrachloride as a function of the monomer absorbance strongly favours the interpretation of the association of this alcohol with a monomer-dimer-tetramer model up to a molar fraction of 0.012. This model also explains very well the concentration dependence of the apparent dipole moment. Equilibrium constants and dielectric parameters have been determined. Suggestions about the structure of the various associates are made.


Author(s):  
YUTAKA KAGAYA ◽  
HIROAKI ISAGO

Rapid reactions of tetra(tert-butyl)phthalocyanine, H 2( tbpc ), and its zinc complex, [ Zn ( tbpc )], with tellurium tetrachloride ( TeCl 4) in non-aqueous solutions have been investigated. Upon mixing respective solutions containing the reactants, drastic spectral changes occurred in chloroform and toluene even at room temperature. The electronic spectra of the products indicated that the reactions involved an acid-base equilibrium where the phthalocyanines and tellurium tetrachloride acted as a Lewis base and a Lewis acid respectively. By monitoring the spectral changes based on various initial molar ratios of the reactants, the compositions of the products for each system have been determined. [ Zn ( tbpc )] formed a 1:1 ( tbpc : TeCl 4) adduct in both chloroform and toluene, showing the same spectra close to those of the known monoprotonated phthalocyanines. On the other hand, H 2( tbpc ) formed a 1:1 adduct in chloroform but a 1:3 adduct in toluene even though both products showed essentially the same spectra close to those of the known diprotonated phthalocyanines. Equilibrium constants have been calculated for the four systems. Magnetic circular dichroism (MCD) spectra of conjugated acids of phthalocyanines have been studied for the first time.


1992 ◽  
Vol 70 (7) ◽  
pp. 1873-1878 ◽  
Author(s):  
Otto Exner

Permittivity measurements on solutions of two compounds present in a variable ratio may reveal complex formation: both the equilibrium constant and the dipole moment of the complex can be in principle estimated. However, an incorrect statistical treatment involving transformation of variables is used quite often, for example, in the classical method of Few and Smith. In this case the estimates obtained are usually biased, or loaded with such a great uncertainty that they are practically worthless. The results of numerous papers, even some recent ones, are thus completely at variance with facts. This is shown in this paper by recalculating equilibrium constants and dipole moments of the complex in 17 examples from the literature. Simultaneously, a correct and simple statistical procedure is suggested. The danger of an incorrect and (or) incomplete statistical treatment may be encountered, for the same reason, even in other, quite different, areas.


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