scholarly journals Xenopus laevis Egg Extract Preparation and Live Imaging Methods for Visualizing Dynamic Cytoplasmic Organization

Author(s):  
Xianrui Cheng ◽  
James E. Ferrell,
2018 ◽  
Vol 2018 (9) ◽  
pp. pdb.prot102509 ◽  
Author(s):  
Julio C. Flores Servin ◽  
Aaron F. Straight

2013 ◽  
Vol 53 (supplement1-2) ◽  
pp. S233
Author(s):  
Takashi W. Ijiri ◽  
Jun-ichi Kishikawa ◽  
Hiromi Imamura ◽  
Maho Sakiie ◽  
Shuichi Ueno ◽  
...  

1990 ◽  
Vol 97 (1) ◽  
pp. 177-184
Author(s):  
L.S. Cox ◽  
G.H. Leno

We describe a cell-free extract derived from the oocytes of Xenopus laevis. The oocyte extract is capable of decondensing sperm chromatin and of replicating single-stranded DNA in a semiconservative, aphidicolin-sensitive manner. In addition, oocyte extract supports the elongation phase of DNA synthesis in nuclei that have been preinitiated for replication. All of these properties are shared by previously described egg extracts. However, oocyte extracts differ from egg extracts in two important ways. First, they cannot support nuclear assembly, as visualised by phase-contrast, fluorescence and electron microscopy. Second, they do not initiate replication on chromatin or nuclei de novo. Crude low-speed supernatants can be partially fractionated into soluble and vesicular components by high-speed centrifugation. Such fractions from eggs can be functionally reconstituted, but the oocyte soluble fraction does not acquire the ability to assemble nuclei, or replicate them, even when supplemented with the egg vesicular fraction. Similarly, oocyte vesicles cannot substitute for egg vesicles on reconstitution with the egg soluble fraction. When the requirement for nuclear assembly is bypassed by using preformed, quiescent nuclei, replication is observed in egg but not oocyte extracts. However, the oocyte extract is not inhibitory for initiation of replication, as it does not prevent replication of sperm nuclei when mixed with egg extract. We suggest that the different capabilities of egg and oocyte extracts could provide the basis of an assay system for identifying factors involved in the initiation of DNA replication.


2008 ◽  
Vol 182 (4) ◽  
pp. 715-726 ◽  
Author(s):  
Marianne Uteng ◽  
Christian Hentrich ◽  
Kota Miura ◽  
Peter Bieling ◽  
Thomas Surrey

Molecular motors are required for spindle assembly and maintenance during cell division. How motors move and interact inside spindles is unknown. Using photoactivation and photobleaching, we measure mitotic motor movement inside a dynamic spindle. We find that dynein–dynactin transports the essential motor Eg5 toward the spindle poles in Xenopus laevis egg extract spindles, revealing a direct interplay between two motors of opposite directionality. This transport occurs throughout the spindle except at the very spindle center and at the spindle poles, where Eg5 remains stationary. The variation of Eg5 dynamics with its position in the spindle is indicative of position-dependent functions of this motor protein. Our results suggest that Eg5 drives microtubule flux by antiparallel microtubule sliding in the spindle center, whereas the dynein-dependent concentration of Eg5 outside the spindle center could contribute to parallel microtubule cross-linking. These results emphasize the importance of spatially differentiated functions of motor proteins and contribute to our understanding of spindle organization.


2018 ◽  
Vol 2018 (6) ◽  
pp. pdb.prot097196 ◽  
Author(s):  
Pan Chen ◽  
Daniel L. Levy
Keyword(s):  

2010 ◽  
Vol 98 (3) ◽  
pp. 474a
Author(s):  
Hongxia Fu ◽  
Benjamin Freedman ◽  
Chwee Teck Lim ◽  
Rebecca Heald ◽  
Jie Yan

Gene ◽  
1993 ◽  
Vol 124 (2) ◽  
pp. 275-280 ◽  
Author(s):  
Heiner Schaal ◽  
Petra Pfeiffer ◽  
Michael Klein ◽  
Peter Gehrmann ◽  
Andreas Scheid

2004 ◽  
Vol 167 (5) ◽  
pp. 813-818 ◽  
Author(s):  
David T. Miyamoto ◽  
Zachary E. Perlman ◽  
Kendra S. Burbank ◽  
Aaron C. Groen ◽  
Timothy J. Mitchison

Although mitotic and meiotic spindles maintain a steady-state length during metaphase, their antiparallel microtubules slide toward spindle poles at a constant rate. This “poleward flux” of microtubules occurs in many organisms and may provide part of the force for chromosome segregation. We use quantitative image analysis to examine the role of the kinesin Eg5 in poleward flux in metaphase Xenopus laevis egg extract spindles. Pharmacological inhibition of Eg5 results in a dose–responsive slowing of flux, and biochemical depletion of Eg5 significantly decreases the flux rate. Our results suggest that ensembles of nonprocessive Eg5 motors drive flux in metaphase Xenopus extract spindles.


2018 ◽  
Author(s):  
Adam Pickard ◽  
Antony Adamson ◽  
Yinhui Lu ◽  
Joan Chang ◽  
Richa Garva ◽  
...  

Electron microscopy has been the “gold standard” for studying collagen networks but dynamic information on how cells synthesise the networks has been lacking. Live imaging methods have been unable to distinguish newly-synthesised fibrils from pre-existing fibrils and intracellular collagen. Here, we tagged endogenous collagen-I using CRISPR-Cas9 with photoswitchable Dendra2 and demonstrate live cells synthesising, migrating on, and interacting with, collagen fibrils. This strategy is applicable for other long half-life proteins.


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