scholarly journals Application of CRISPR Interference (CRISPRi) for Gene Silencing in Pathogenic Species of Leptospira

Author(s):  
L. G. V. Fernandes ◽  
R. L. Hornsby ◽  
A.L.T.O. Nascimento ◽  
J. E. Nally
2019 ◽  
Author(s):  
Aditi Kulkarni ◽  
Wanqin Yu ◽  
Alex Moon ◽  
Ashmita Pandey ◽  
Kathryn A. Hanley ◽  
...  

AbstractIn the CRISPR-Cas systems, Cas13a is an RNA-guided RNA nuclease specifically targeting single strand RNA. We developed a Cas13a mediated CRISPR interference tool to target mRNA for gene silencing in mosquitoes. The machinery was tested in two mosquito species. A Cas13a expressing plasmid was delivered to mosquitoes by intrathoracic injection, and Cas13a transcripts were detectable at least10 days post-delivery. In Anopheles gambiae, vitellogenin gene was silenced by Vg-crRNA injection two hours post-blood meal, which was accompanied by a significant reduction in egg production. In Aedes aegypti, the α- and δ-subunits of COPI genes were silenced by a post-blood meal crRNA injection, which resulted in mortality and fragile midguts, reproducing a phenotype reported previously. Co-silencing genes simultaneously is achievable when a cocktail of target crRNAs is given. No detectable collateral cleavages of non-target transcripts were observed in the study. This study adds a programmable CRISPR tool to manipulate RNA in mosquitoes.


PLoS ONE ◽  
2018 ◽  
Vol 13 (1) ◽  
pp. e0185987 ◽  
Author(s):  
Yusuke Sato’o ◽  
Junzo Hisatsune ◽  
Liansheng Yu ◽  
Tetsushi Sakuma ◽  
Takashi Yamamoto ◽  
...  

2016 ◽  
Vol 18 (4) ◽  
pp. 541-553 ◽  
Author(s):  
Mohammad A. Mandegar ◽  
Nathaniel Huebsch ◽  
Ekaterina B. Frolov ◽  
Edward Shin ◽  
Annie Truong ◽  
...  

2015 ◽  
Vol 6 (1) ◽  
Author(s):  
Eira Choudhary ◽  
Preeti Thakur ◽  
Madhu Pareek ◽  
Nisheeth Agarwal

2020 ◽  
Vol 8 ◽  
pp. 30-36
Author(s):  
Aditi Kulkarni ◽  
Wanqin Yu ◽  
Alex Moon ◽  
Ashmita Pandey ◽  
Kathryn A. Hanley ◽  
...  

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
L. G. V. Fernandes ◽  
R. L. Hornsby ◽  
A. L. T. O. Nascimento ◽  
J. E. Nally

AbstractLeptospirosis is a neglected, widespread zoonosis caused by pathogenic species of the genus Leptospira, and is responsible for 60,000 deaths per year. Pathogenic mechanisms of leptospirosis remain poorly understood mainly because targeted mutations or gene silencing in pathogenic Leptospira continues to be inherently inefficient, laborious, costly and difficult to implement. In addition, pathogenic leptospires are highly fastidious and the selection of mutants on solid agar media can take up to 6 weeks. The catalytically inactive Cas9 (dCas9) is an RNA-guided DNA-binding protein from the Streptococcus pyogenes CRISPR/Cas system and can be used for gene silencing, in a strategy termed CRISPR interference (CRISPRi). Here, this technique was employed to silence genes encoding major outer membrane proteins of pathogenic L. interrogans. Conjugation protocols were optimized using the newly described HAN media modified for rapid mutant recovery at 37 °C in 3% CO2 within 8 days. Complete silencing of LipL32 and concomitant and complete silencing of both LigA and LigB outer membrane proteins were achieved, revealing for the first time that Lig proteins are involved in pathogenic Leptospira serum resistance. Gene silencing in pathogenic leptospires and rapid mutant recovery will facilitate novel studies to further evaluate and understand pathogenic mechanisms of leptospirosis.


2019 ◽  
Vol 201 (14) ◽  
Author(s):  
Aimee Shen

ABSTRACT Clostridioides difficile genetics has rapidly advanced in recent years thanks to the development of tools for allelic replacement and transposon mutagenesis. In this Journal of Bacteriology issue, Müh et al. extend the genetics toolbox by developing a CRISPR interference (CRISPRi) strategy for gene silencing in C. difficile (U. Müh, A. G. Pannullo, D. S. Weiss, and C. D. Ellermeier, 2019, J Bacteriol 201:e00711-18. https://doi.org/10.1128/JB.00711-18). The authors demonstrate the tunability and robustness of their CRISPRi system, highlight its utility in studying essential gene function, and discuss exciting new possibilities for dissecting C. difficile physiology.


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