scholarly journals Cladistic classification of Mecyclothorax Sharp (Coleoptera, Carabidae, Moriomorphini) and taxonomic revision of the New Caledonian subgenus Phacothorax Jeannel

2018 ◽  
Vol 65 (1) ◽  
pp. 1-63 ◽  
Author(s):  
James Liebherr
2016 ◽  
Vol 6 (4) ◽  
pp. 131-142
Author(s):  
Gamal E. B. E.B. El Ghazali

Pollen grains of 92 species (from 99 collections) belonging to the genus Com-bretum (Combretaceae) were examined by Light Microscope (LM) and Scan-ning Electron Microscope (SEM). These species are representatives of vari-ous taxa outlined in the latest taxonomic revision of the genus. The genus belongs to a tropical or subtropical family, frequently encountered in various Quaternary deposits and acts as ecological indicator in various habitats. Pol-len grains of all members of the genus Combretum examined are hetero-colpate (with three simple apertures alternating with three composite ones) and exhibited wide range of inter-specific variation with respect to polar axes (P), Equatorial diameters (E), P/E ratios, shape classes, shape in polar view, costae pori, vestibula, protrusion of endoapertures and exine sculptur-ings. Species delimitation in these nine characters is tabulated. Four shape classes, eight exine sculpturings and seven pollen types were recognized. A key for identification to these pollen types is presented and the species in-cluded in each of these types are also outlined. Previous macro-morphological and molecular classification of the genus were discussed in the light of the present palynological study.


2020 ◽  
Vol 5 (1) ◽  
pp. 17-38 ◽  
Author(s):  
K. Seto ◽  
S. Van Den Wyngaert ◽  
Y. Degawa ◽  
M. Kagami

During the last decade, the classification system of chytrids has dramatically changed based on zoospore ultrastructure and molecular phylogeny. In contrast to well-studied saprotrophic chytrids, most parasitic chytrids have thus far been only morphologically described by light microscopy, hence they hold great potential for filling some of the existing gaps in the current classification of chytrids. The genus Zygorhizidium is characterized by an operculate zoosporangium and a resting spore formed as a result of sexual reproduction in which a male thallus and female thallus fuse via a conjugation tube. All described species of Zygorhizidium are parasites of algae and their taxonomic positions remain to be resolved. Here, we examined morphology, zoospore ultrastructure, host specificity, and molecular phylogeny of seven cultures of Zygorhizidium spp. Based on thallus morphology and host specificity, one culture was identified as Z. willei parasitic on zygnematophycean green algae, whereas the others were identified as parasites of diatoms, Z. asterionellae on Asterionella, Z. melosirae on Aulacoseira, and Z. planktonicum on Ulnaria (formerly Synedra). According to phylogenetic analysis, Zygorhizidium was separated into two distinct order-level novel lineages; one lineage was composed singly of Z. willei, which is the type species of the genus, and the other included the three species of diatom parasites. Zoospore ultrastructural observation revealed that the two lineages can be distinguished from each other and both possess unique characters among the known orders within the Chytridiomycetes. Based on these results, we accommodate the three diatom parasites, Z. asterionellae, Z. melosirae, and Z. planktonicum in the distinct genus Zygophlyctis, and propose two new orders: Zygorhizidiales and Zygophlyctidales.


2009 ◽  
Vol 60 (5) ◽  
pp. 419-430
Author(s):  
Lamara Maisuradze ◽  
Kakhaber Koiava ◽  
Silvia Spezzaferri

Taxonomic revision and new species/subspecies of Middle-Late Miocene (Bessarabian) miliolids of the Family Hauerinidae Schwager from Georgia — Eastern ParatethysThree new miliolid taxa from Bessarabian sediments from Georgia (Eastern Paratethys) are described following the classification of Łuczkowska (1972), which has never been used before by ex-Soviet micropaleontologists. They are:Varidentella luczkowskae; Varidentella reussi(Bogdanowicz) subsp.costulata; andAffinetrina voloshinovae(Bogdanowicz) subsp.eldarica.This classification takes into account the morphology of the aperture and the shape and size of teeth as criteria to distinguish the species. This study contributes important criteria which will help to unify the taxonomical inconsistencies between the Eastern, Central and Western Paratethyan miliolids.


2013 ◽  
Vol 63 (Pt_7) ◽  
pp. 2742-2751 ◽  
Author(s):  
Henryk Urbanczyk ◽  
Yoshitoshi Ogura ◽  
Tetsuya Hayashi

Use of inadequate methods for classification of bacteria in the so-called Harveyi clade (family Vibrionaceae, Gammaproteobacteria) has led to incorrect assignment of strains and proliferation of synonymous species. In order to resolve taxonomic ambiguities within the Harveyi clade and to test usefulness of whole genome sequence data for classification of Vibrionaceae, draft genome sequences of 12 strains were determined and analysed. The sequencing included type strains of seven species: Vibrio sagamiensis NBRC 104589T, Vibrio azureus NBRC 104587T, Vibrio harveyi NBRC 15634T, Vibrio rotiferianus LMG 21460T, Vibrio campbellii NBRC 15631T, Vibrio jasicida LMG 25398T, and Vibrio owensii LMG 25443T. Draft genome sequences of strain LMG 25430, previously designated the type strain of [Vibrio communis], and two strains (MWB 21 and 090810c) from the ‘beijerinckii’ lineage were also determined. Whole genomes of two additional strains (ATCC 25919 and 200612B) that previously could not be assigned to any Harveyi clade species were also sequenced. Analysis of the genome sequence data revealed a clear case of synonymy between V. owensii and [V. communis], confirming an earlier proposal to synonymize both species. Both strains from the ‘beijerinckii’ lineage were classified as V. jasicida, while the strains ATCC 25919 and 200612B were classified as V. owensii and V. campbellii, respectively. We also found that two strains, AND4 and Ex25, are closely related to Harveyi clade bacteria, but could not be assigned to any species of the family Vibrionaceae. The use of whole genome sequence data for the taxonomic classification of the Harveyi clade bacteria and other members of the family Vibrionaceae is also discussed.


2008 ◽  
Vol 19 (1) ◽  
pp. 1-12 ◽  
Author(s):  
Andrea Tóthová ◽  
Jan Knoz ◽  
Radim Sonnek ◽  
Josef Bryja ◽  
Jaromír Vaňhara

The classification of Meloehelea (Ceratopogonidae) species is based on morphological characters. The taxonomic revision of generally well-known species recovered interesting facts on possible geographic intraspecific variability or on the presence of an additional valid species. In this study, 5 European species and 2 species from the U.S.A. and Canada have been compared based on their morphological characters. Subsequently, the 16S rDNA sequences analyses of well known European species have been performed to confirm the characters mentioned in the determination key ofthis subgenus. Although, this study was limited by the number of examined non-European specimens, it provides some interesting facts on the possible morphological variability of well-known species and also an initial phylogenetic backbone for the progressive reconstruction of infrageneric relationships within the genus Atrichopogon.


1981 ◽  
Vol 1 (1) ◽  
pp. 1-3 ◽  
Author(s):  
Kåre Bremer ◽  
Hans–Erik Wanntorp

Phytotaxa ◽  
2017 ◽  
Vol 324 (3) ◽  
pp. 266
Author(s):  
SATOSHI AOKI ◽  
TETSUO OHI-TOMA ◽  
PAN LI ◽  
CHENGXIN FU ◽  
JIN MURATA

To assess the classification of East Asian taxa in Oxalis subsect. Oxalis, samples from a wide geographical area were examined using molecular phylogenetic, cytological and morphological analyses. The phylogenetic analysis showed the early branching of O. leucolepis and O. obtriangulata in East Asia, followed by that of O. acetosella and O. oregana in North America. The remaining Eurasian samples were divided into four clades: taxa from Mainland China and Taiwan (Clade A); O. acetosella from Eurasia including Japan (Clade B); O. griffithii from Japan (Clade C); and O. griffithii plus some O. acetosella from Japan (Clade D). Therefore, O. acetosella and O. griffithii are not monophyletic species. In the flow cytometric analysis, three diploid groups with different relative genome sizes were distinguished, and were placed in each of Clades A, B, and C plus D; tetraploids were found in Clades C and D. Morphologically, most pairs of samples had distinguishing characters that were informative for delimitation. However, the characters of O. griffithii in Clades A and C (including tetraploids) were not informative, and diploids and tetraploids in Clade C did not morphologically differ. These results demonstrate the necessity for a taxonomic revision of this subsection.


1998 ◽  
Vol 76 (7) ◽  
pp. 1344-1357 ◽  
Author(s):  
Keith L Jackson ◽  
Joseph S Nelson

The new genus Ambophthalmos is recognised for "Neophrynichthys" angustus and "Neophrynichthys" magnicirrus, two southern Pacific psychrolutids. A hypothesis of psychrolutid phylogenetic relationships based on parsimony analysis of osteological characters is presented. Two synapomorphic characters suggest that A. angustus and A. magnicirrus form a monophyletic group: the supratemporal is posteriorly fused to the posttemporal and arch 2 is medially fused to its antimere. Four characters suggest that Cottunculus is monophyletic and five synapomorphic characters suggest that Ambophthalmos is sister to Cottunculus. A cladistic classification of the Psychrolutidae includes five subfamilies sequenced as Dasycottinae, new; Eurymeninae, new; Cottunculinae, redefined; Malacocottinae, new; and Psychrolutinae, unchanged.


ZooKeys ◽  
2021 ◽  
Vol 1047 ◽  
pp. 155-198
Author(s):  
Fernando L. Mantelatto ◽  
Leonardo G. Pileggi ◽  
João A. F. Pantaleão ◽  
Célio Magalhães ◽  
José Luis Villalobos ◽  
...  

The freshwater shrimp genus Cryphiops Dana, 1852 has a disjunct distribution in North (Mexico) and South (Brazil, Chile) America, and is composed of only six species. The current classification of genera in the Palaemonidae is controversial, based on variable morphological characters, and still far from a clear definition. Cryphiops differs from the speciose genus Macrobrachium Spence Bate, 1868 only by the absence of the hepatic spines on the carapace. Previous studies with a limited dataset suggested the necessity to link morphology and phylogeny to create an internal rearrangement in the genus to resolve the paraphyletic status. Through a molecular phylogenetic approach, the evolutionary relationships are inferred based on four (mitochondrial and nuclear) genes, among all recognized species of Cryphiops and, in combination with a taxonomic revision, a rearrangement in the systematics of the genus is suggested. The absence of hepatic spines on the carapace, the only character used to separate the genus Cryphiops, is subjective and should be considered as a homoplasy. This implies that Cryphiops and Macrobrachium are subjective synonyms and, because the latter genus is much more diverse and widely known, with several economically important species, to avoid confusion and disturbance in nomenclatural stability and keep universality, a proposal for the priority of the older synonym (Cryphiops) to be partially suppressed in favor of maintaining the prevailing use of the younger synonym (Macrobrachium) is presented. As the species of Cryphiops should be accommodated in the genus Macrobrachium, new names to replace three preoccupied specific names that, by this action, resulted to be secondary homonyms are offered.


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