Four new species in the Tremella fibulifera complex (Tremellales, Basidiomycota)

Samples of species close to Tremella fibulifera from China and Brazil are studied, and T. fibulifera is confirmed as a species complex including nine species. Five known species (T. cheejenii, T. fibulifera s.s., T. “neofibulifera”, T. lloydiae-candidae and T. olens) and four new species (T. australe, T. guangxiensis, T. latispora and T. subfibulifera) in the complex are recognized based on morphological characteristics, molecular evidence, and geographic distribution. Sequences of eight species of the complex were included in the phylogenetic analyses because T. olens lacks molecular data. The phylogenetic analyses were performed by a combined sequence dataset of the internal transcribed spacer (ITS) and the partial nuclear large subunit rDNA (nLSU), and a combined sequence dataset of the ITS, partial nLSU, the small subunit mitochondrial rRNA gene (mtSSU), the translation elongation factor 1-α (TEF1), the largest and second largest subunits of RNA polymerase II (RPB1 and RPB2). The eight species formed eight independent lineages with robust support in phylogenies based on both datasets. Illustrated description of the six species including Tremella fibulifera s.s., T. “neofibulifera” and four new species, and discussions with their related species, are provided. A table of the comparison of the important characteristics of nine species in the T. fibulifera complex and a key to the whitish species in Tremella s.s. are provided.

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Diversity of Akanthomyces on moths (Lepidoptera) in Thailand

MycoKeys ◽

10.3897/mycokeys.71.55126 ◽

2020 ◽

Vol 71 ◽

pp. 1-22

Author(s):

Arifah Nur Aini ◽

Suchada Mongkolsamrit ◽

Wijanarka Wijanarka ◽

Donnaya Thanakitpipattana ◽

J. Jennifer Luangsa-ard ◽

...

Keyword(s):

New Species ◽

Rna Polymerase ◽

Rna Polymerase Ii ◽

Phylogenetic Analyses ◽

Large Subunit ◽

Elongation Factor ◽

Morphological Characteristics ◽

Pathogenic Fungi ◽

Molecular Data ◽

Three New Species

Akanthomyces is a genus of invertebrate-pathogenic fungi from the family Cordycipitaceae (Ascomycota, Hypocreales). Its species occurs on two different types of hosts, spiders and insects, and in the latter case specifically Lepidoptera adults. Three new species of Akanthomyces, A. noctuidarum, A. pyralidarum, and A. tortricidarum occurring on adult moths from Thailand are proposed based on the differences of their morphological characteristics and molecular data. Phylogenetic analyses using a combined dataset, including the internal transcribed spacer regions, the large subunit of the ribosomal DNA, translation elongation factor 1-α, the largest subunit of RNA polymerase II, and the second largest subunit of RNA polymerase II, support the delimitation of these new species in Akanthomyces.

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Multi-Gene Phylogeny and Taxonomy of Hydnellum (Bankeraceae, Basidiomycota) from China

Journal of Fungi ◽

10.3390/jof7100818 ◽

2021 ◽

Vol 7 (10) ◽

pp. 818

Author(s):

Yan-Hong Mu ◽

Jia-Rui Yu ◽

Ting Cao ◽

Xiang-Hua Wang ◽

Hai-Sheng Yuan

Keyword(s):

New Species ◽

Rna Polymerase Ii ◽

Ribosomal Rna ◽

Phylogenetic Analyses ◽

Large Subunit ◽

Morphological Characteristics ◽

Small Subunit ◽

Phylogenetic Position ◽

Ribosomal Rna Gene ◽

Morphological Studies

The genus Hydnellum is an important group of stipitate hydnaceous fungi which can form ectomycorrhiza with many species of woody plants. In recent decades, the frequency and number of basidiocarps observed in China have been declining significantly. So far, however, we know little about the species diversity of Hydnellum in China. In this study, we conducted molecular phylogenetic analyses based on sections of multiple loci, including the large subunit of nuclear ribosomal RNA gene (nLSU), the internal transcribed spacer regions (ITS), the small subunit of nuclear ribosomal RNA gene (SSU) and the second-largest subunit of RNA polymerase II gene (RPB2), as well as morphological studies, of collected samples of Hydnellum from China. We also inferred Maximum Likelihood and Bayesian phylogenies for the order Thelephorales from the dataset of the combined nLSU and ITS. This study has revealed the phylogenetic position of Hydnellum in the order Thelephorales, and phylogenetically confirmed ten major clades in Thelephorales; Twenty-nine taxa are proposed, described or reported, including 10 new subgenera (Hydnellum subgenus Hydnellum, subg. Caesispinosum, subg. Croceum, subg. Inflatum, subg. Rhizomorphum, subg. Scabrosum, subg. Spongiosum, subg. Subindufibulatum, subg. Violaceum and subg. Zonatum), 11 new species (Hydnellum atrorubrum, H. atrospinosum, H. bomiense, H. brunneorubrum, H. fibulatum, H. granulosum, H. inflatum, H. rubidofuscum, H. squamulosum, H. sulcatum and H. yunnanense), 3 newly recorded species (H. caeruleum, H. peckii and H. spongiosipes) and 5 notable specimens (Hydnellum sp 1, H. sp 2, H. sp 3, H. sp 4 and H. sp 5). A classification system based on the morphological characteristics (especially the hyphal structure types) and molecular analyses is proposed to accommodate most species in Hydnellum. The distinguishing characters of the subgenera and the new species with their closely related taxa are discussed. A key to the species of Hydnellum from China is provided.

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Dothidea kunmingensis, a novel asexual species of Dothideaceae on Jasminum nudiflorum (winter jasmine) from Southwestern China

Phytotaxa ◽

10.11646/phytotaxa.529.1.3 ◽

2021 ◽

Vol 529 (1) ◽

pp. 43-56

Author(s):

YING GAO ◽

JUTAMART MONKAI ◽

ELENI GENTEKAKI ◽

GUANG-CONG REN ◽

DHANUSHKA N. WANASINGHE ◽

...

Keyword(s):

New Species ◽

Phylogenetic Analyses ◽

Large Subunit ◽

Elongation Factor ◽

Morphological Characteristics ◽

Small Subunit ◽

Morphological Characterization ◽

Small Subunit Rrna ◽

Sister Relationship ◽

Large Subunit Rrna

During a survey of saprobic microfungi in Southwest China, a coelomycetous fungus was found on dead twigs of Jasminum nudiflorum in Kunming, Yunnan Province. Based on a detailed morphological characterization coupled with multi-locus phylogenetic analyses, the fungus was identified as a new species in the genus Dothidea. Phylogenetic analyses using a combined matrix consisting of internal transcribed spacer (ITS), large subunit rRNA (LSU), small subunit rRNA (SSU), beta tubulin (tub2) and translation elongation factor-1 alpha (tef1-α) confirmed its placement in Dothideaceae and revealed a sister relationship to Dothidea eucalypti. The new species is characterized by pycnidial conidiomata, ampulliform or doliiform conidiogenous cells as well as aseptate, subglobose to ovoid, hyaline to pale-brown conidia. Comprehensive descriptions and illustrations are provided. Morphological characteristics of asexual morph taxa in Dothideaceae are also summarized and discussed.

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Morphological characters and molecular data reveal a new species of Rhodonia (Polyporales, Basidiomycota) from China

Phytotaxa ◽

10.11646/phytotaxa.328.2.8 ◽

2017 ◽

Vol 328 (2) ◽

pp. 175

Author(s):

YUAN YUAN ◽

LU-LU SHEN

Keyword(s):

New Species ◽

Rna Polymerase Ii ◽

Dna Sequences ◽

Large Subunit ◽

Morphological Characteristics ◽

Northwest China ◽

Morphological Characters ◽

Molecular Data ◽

Molecular Evidence ◽

A New Species

A new polypore, Rhodonia tianshanensis, collected from West Tianshan Nature Reserve in Xinjiang Autonomous Region (northwest China), is described and illustrated based on morphological characteristics and molecular evidence. It is characterized by having resupinate basidiomata with an oblique tube layer, fusoid cystidioles in the hymenium, and cylindrical basidiospores. Based on multiple loci DNA sequences including the internal transcribed spacer (ITS), the large subunit (nLSU), and the second subunit of RNA polymerase II (RPB2) regions, our phylogeny strongly supported R. tianshanensis as a new species belonging to the genus Rhodonia.

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Unveiling the Hidden Diversity of Rock-Inhabiting Fungi: Chaetothyriales from China

Journal of Fungi ◽

10.3390/jof6040187 ◽

2020 ◽

Vol 6 (4) ◽

pp. 187

Author(s):

Wei Sun ◽

Lei Su ◽

Shun Yang ◽

Jingzu Sun ◽

Bingjie Liu ◽

...

Keyword(s):

New Species ◽

Rna Polymerase ◽

Rna Polymerase Ii ◽

Phylogenetic Analyses ◽

Large Subunit ◽

Morphological Characteristics ◽

Small Subunit ◽

Internal Transcribed Spacer Region ◽

Natural Rock ◽

Rock Inhabiting Fungi

Rock-inhabiting fungi (RIF) are nonlichenized fungi that naturally colonize rock surfaces and subsurfaces. The extremely slow growth rate and lack of distinguishing morphological characteristics of RIF resulted in a poor understanding on their biodiversity. In this study, we surveyed RIF colonizing historical stone monuments and natural rock formations from throughout China. Among over 1000 isolates, after preliminary delimitation using the internal transcribed spacer region (ITS) sequences, representative isolates belonging to Trichomeriaceae and Herpotrichiellaceae were selected for a combined analysis of ITS and the nuclear ribosomal large subunit (nucLSU) to determine the generic placements. Eight clades representing seven known genera and one new genus herein named as Anthracina were placed in Trichomeriaceae. While, for Herpotrichiellaceae, two clades corresponded to two genera: Cladophialophora and Exophiala. Fine-scale phylogenetic analyses using combined sequences of the partial actin gene (ACT), ITS, mitochondrial small subunit ribosomal DNA (mtSSU), nucLSU, the largest subunit of RNA polymerase II (RPB1), small subunit of nuclear ribosomal RNA gene (SSU), translation elongation factor (TEF), and β-tubulin gene (TUB) revealed that these strains represented 11 and 6 new species, respectively, in Trichomeriaceae and Herpotrichiellaceae. The 17 new species were described, illustrated for their morphologies and compared with similar taxa. Our study demonstrated that the diversity of RIF is surprisingly high and still poorly understood. In addition, a rapid strategy for classifying RIF was proposed to determine the generic and familial placements through preliminary ITS and nucLSU analyses, followed by combined analyses of five loci selected from ACT, ITS, mtSSU, nucLSU, RPB1, and/or the second subunit of RNA polymerase II gene (RPB2), SSU, TEF, and TUB regions to classify RIF to the species level.

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Heterobasidion amyloideopsis sp. nov. (Basidiomycota, Russulales) evidenced by morphological characteristics and phylogenetic analysis

Phytotaxa ◽

10.11646/phytotaxa.317.3.4 ◽

2017 ◽

Vol 317 (3) ◽

pp. 199 ◽

Cited By ~ 2

Author(s):

CHANG-LIN ZHAO ◽

MALKA SABA ◽

ABDUL NASIR KHALID ◽

JIE SONG ◽

DONALD H. PFISTER

Keyword(s):

New Species ◽

Maximum Likelihood ◽

Rna Polymerase ◽

Rna Polymerase Ii ◽

Phylogenetic Analyses ◽

Large Subunit ◽

Morphological Characteristics ◽

Molecular Evidence ◽

Gene Encoding ◽

Annual Habit

Heterobasidion amyloideopsis sp. nov., a new poroid wood-inhabiting species from Pakistan, is introduced based on a combination of molecular evidence and morphological characteristics. We generated sequences from the nuclear internal transcribed spacer regions (ITS) and the large subunit ribosomal RNA gene (LSU), the gene encoding the largest subunit of RNA polymerase II (RPB1) and the second subunit of RNA polymerase II (RPB2), focusing on two specimens from Pakistan. We performed phylogenetic analyses with maximum likelihood, maximum parsimony, and bayesian inference methods on two datasets (RPB1+RPB2 and ITS+nLSU+RPB1+RPB2). Both analyses supported the existence of the new species and showed that it formed a monophyletic group within the H. insulare complex as a sister to H. amyloideum. In addition to assessing the origin and divergence of this new species, we focused on the RPB1+RPB2 dataset to perform maximum likelihood based estimation and Bayesian binary analyses. Heterobasidion amyloideopsis is characterized by an annual habit, pileate basidiomata with a rust colored pileal surface, white, obtuse margin, a dimitic hyphal system with simple septate generative hyphae in the trama and clamp connections present on the contextual hyphae, amyloid skeletal hyphae and broadly ellipsoid, hyaline, fairly thick-walled, and asperulate basidiospores.

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Phylogeny and taxonomy of Laetiporus (Basidiomycota, Polyporales) with descriptions of two new species from western China

MycoKeys ◽

10.3897/mycokeys.37.26016 ◽

2018 ◽

Vol 37 ◽

pp. 57-71 ◽

Cited By ~ 6

Author(s):

Jie Song ◽

Yi-Fei Sun ◽

Xing Ji ◽

Yu-Cheng Dai ◽

Bao-Kai Cui

Keyword(s):

New Species ◽

Rna Polymerase Ii ◽

Large Subunit ◽

Brown Rot ◽

Small Subunit ◽

Western China ◽

Molecular Evidence ◽

Rrna Gene ◽

Pore Surface ◽

Two New Species

Laetiporus is a cosmopolitan genus of brown rot fungi. In this study, L.medogensis and L.xinjiangensis are described as new species from western China, based on morphological and molecular evidence. L.medogensis has only been found on gymnosperms so far and is distinguished by pinkish-buff to clay-buff pileal surface and buff-yellow pore surface, azonate to faintly zonate pileus and ellipsoid to ovoid basidiospores (5–6.2 × 4.2–5.2 μm). L.xinjiangensis is found on angiosperms and is characterised by pale-buff to clay-pink pileal surface, cream to light yellow pore surface, azonate to faintly zonate pileus, large pores (2–3 per mm) and small basidiospores (4.5–5 × 3–4.2 μm). The phylogeny of Laetiporus is reconstructed with multi-gene sequences including the internal transcribed spacer regions (ITS), the large subunit (nrLSU) and small subunit (nrSSU) of the nuclear ribosomal RNA gene, the small subunit of the mitochondrial rRNA gene (mtSSU), the translation elongation factor 1-α gene (EF-1α) and the second subunit of RNA polymerase II (RPB2). The results show that L.medogensis and L.xinjiangensis formed two distinct lineages belonging to Laetiporus. Illustrated descriptions of the two new species are presented. An identification key to species of L.sulphureus complex is provided.

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Taxonomy and Phylogeny of the Favolaschia calocera Complex (Mycenaceae) with Descriptions of Four New Species

Forests ◽

10.3390/f12101397 ◽

2021 ◽

Vol 12 (10) ◽

pp. 1397

Author(s):

Qiu-Yue Zhang ◽

Yu-Cheng Dai

Keyword(s):

New Species ◽

Ribosomal Rna ◽

Phylogenetic Analyses ◽

Large Subunit ◽

Elongation Factor ◽

Small Subunit ◽

Rrna Gene ◽

Ribosomal Rna Gene ◽

Worldwide Distribution ◽

Three New Species

Favolaschia calocera was originally described from Madagascar, and reported to have a worldwide distribution. In the current study, samples of the Favolaschia calocera from Central America, Australia, China, Kenya, Italy, New Zealand, and Thailand were analyzed by using both morphological and molecular methods. Phylogenetic analyses were based on the internal transcribed spacer (ITS) dataset, and the combined five-locus dataset of ITS, large subunit nuclear ribosomal RNA gene (nLSU), the small subunit mitochondrial rRNA gene (mt-SSU), the small subunit of nuclear ribosomal RNA gene (nu-SSU), and the translation elongation factor 1α (TEF1). Our study proves that Favolaschia calocera is a species complex, and six species are recognized in the complex including four new species. Three new species F. brevibasidiata, F. brevistipitata, and F. longistipitata from China; and one new species F. minutissima from Asia. In addition, Favolaschia claudopus (Singer) Q.Y. Zhang & C. Dai, earlier treated as a variety of Favolaschia calocera R. Heim, were raised to species rank. Illustrated descriptions of these five new taxa are given. An identification key and a comparison of the characteristics of species in the Favolaschia calocera complex are provided.

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Species Diversity and Molecular Phylogeny of Cyanosporus (Polyporales, Basidiomycota)

Frontiers in Microbiology ◽

10.3389/fmicb.2021.631166 ◽

2021 ◽

Vol 12 ◽

Author(s):

Shun Liu ◽

Lu-Lu Shen ◽

Yan Wang ◽

Tai-Min Xu ◽

Genevieve Gates ◽

...

Keyword(s):

New Species ◽

Rna Polymerase ◽

Rna Polymerase Ii ◽

Ribosomal Rna ◽

Phylogenetic Analyses ◽

Large Subunit ◽

Brown Rot ◽

Small Subunit ◽

Rrna Gene ◽

Ribosomal Rna Gene

Cyanosporus is a cosmopolitan brown-rot fungal genus, recognizable by blue-tinted basidiocarps. Species in this genus were usually treated as belonging to the Postia caesia complex, however, recent phylogenetic analyses showed that this complex represents an independent genus. During further studies on Cyanosporus, five new species were discovered based on morphological features and molecular data. Phylogenetic analyses of Cyanosporus were conducted using the internal transcribed spacer (ITS) regions, the large subunit of nuclear ribosomal RNA gene (nLSU), the small subunit of nuclear ribosomal RNA gene (nSSU), the small subunit of mitochondrial rRNA gene (mtSSU), the largest subunit of RNA polymerase II (RPB1), the second largest subunit of RNA polymerase II (RPB2), and the translation elongation factor 1-α gene (TEF); illustrated descriptions of the new species are provided. In addition, fifteen species previously belonging to the Postia caesia complex are transferred to Cyanosporus and proposed as new combinations.

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Pleurotus sirindhorniae (Pleurotaceae, Agaricales), a new species from northern Thailand

Phytotaxa ◽

10.11646/phytotaxa.460.4.6 ◽

2020 ◽

Vol 460 (4) ◽

pp. 285-295

Author(s):

NAKARIN SUWANNARACH ◽

JATURONG KUMLA ◽

KANITTA SATIENPERAKUL ◽

WITCHAPHART SUNGPALEE ◽

KRIANGSAK SRI-NGERNYUANG ◽

...

Keyword(s):

New Species ◽

Rna Polymerase Ii ◽

Phylogenetic Analyses ◽

Large Subunit ◽

Elongation Factor ◽

Morphological Characteristics ◽

Internal Transcribed Spacers ◽

Nuclear Ribosomal Dna ◽

Full Description ◽

Northern Thailand

A new saprophytic fungus, Pleurotus sirindhorniae, is described based on collections from northern Thailand. This species is characterized by greyish yellow to olive brown pileus, ellipsoid to elongate basidiospores and clavate to mucronate cheilocystidia. It is distinguished from the previously described Pleuotus species by its distinct morphological characteristics. Molecular phylogenetic analyses of the large subunit (LSU) and internal transcribed spacers (ITS) of the nuclear ribosomal DNA (rDNA), the translation elongation factor 1-alpha (tef1) and the RNA polymerase II largest subunit (rpb1) genes also support P. sirindhorniae as a distinct new species within the genus Pleurotus. A full description, color photographs, illustrations and a phylogenetic tree to show the position of P. sirindhorniae are provided.

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