scholarly journals A new combination in Pseudolappula (Boraginaceae, Rochelieae) based on morphological, molecular and palynological evidence

PhytoKeys ◽  
2021 ◽  
Vol 187 ◽  
pp. 77-92
Author(s):  
Dan-Hui Liu ◽  
Xue-Min Xu ◽  
Yi He ◽  
Quan-Ru Liu
Keyword(s):  
Phylogenetic Analysis ◽  
Related Species ◽  
Pollen Grains ◽  
New Combination ◽  
Sister Taxon ◽  
Monotypic Genus ◽  
Phylogenetic Studies

Lappula sinaica was recently transferred to the monotypic genus Pseudolappula based on phylogenetic studies, while the related species, L. occultata, has remained in the genus Lappula. In this study, morphological, molecular, and palynological evidence supports that L. occultata should be transferred to the genus Pseudolappula. Both L. occultata and P. sinaica share a combination of nutlets features that distinguish them from Lappula: a longer adaxial keel and a linear attachment scar. Phylogenetic analysis based on ITS and trnL-F strongly supports L. occultata as the sister taxon of P. sinaica. In addition, pollen grains of these two species are 3-syncolporate with 3 alternating pseudocolpi, which is significantly different from the grains of Lappula taxa. Based on the above evidence, the new combination Pseudolappula occultata is proposed.

Rediscovery of Pseudobartsia glandulosa (Orobanchaceae), a little known, critically endangered herb after 179 years from India, and first report from Eastern Himalayan state Arunachal Pradesh

Phytotaxa ◽  
2020 ◽  
Vol 451 (1) ◽  
pp. 97-102
Author(s):  
DIPANKAR BORAH ◽  
RAJEEV KUMAR SINGH ◽  
PURANJOY MIPUN ◽  
DEIJI NARAH
Keyword(s):  
New Combination ◽  
Morphological Evidence ◽  
Monotypic Genus ◽  
Arunachal Pradesh ◽  
Type Collection ◽  
Type Specimens ◽  
China And India ◽  
Phylogenetic Studies ◽  
Seed Characters ◽  
Collection Form

The monotypic genus Pseudobartsia Hong (1979: 406) is represented by Pseudobartsia glandulosa (Bentham) Yu & Li in Yu et al. (2015: 197) occurring in China and India (Yu et al. 2015, POWO 2020). In China, the species was collected in 1940 from Longtanying, Songming, Yunnan and since then this species was never collected or reported from these localities, hence it is believed to have gone extinct from here (Dong et al. 2013, Yu et al. 2015). In India, this species is known only by the type collection form Shivli, Uttarakhand in the year 1840 by Edgeworth (Khanna et al. 1999). Bentham (1846) described Euphrasia glandulosa based on specimens collected by Edgeworth in 1840 from Shivli, Uttarakhand, India. Later, Hooker (1884) made a combination for Euphrasia glandulosa Bentham (1846: 555) under the genus Phtheirospermum Bunge ex Fischer & Meyer (1835: 35). The genus Pseudobartsia was established by Hong (1979) with one species, Pseudobartsia yunnanensis Hong (1979: 406). Based on the study of the type specimens of Euphrasia glandulosa and Pseudobartsia yunnanensis, Tao (1993, 1996) found that Pseudobartsia yunnanensis cannot be distinguished from Phtheirospermum glandulosum (≡ Euphrasia glandulosa), therefore he treated Pseudobartsia as a synonym of Phtheirospermum and synonymized Pseudobartsia yunnanensis under Phtheirospermum glandulosum. However, recent phylogenetic studies (Dong et al. 2013; McNeal et al. 2013), pollen morphological evidence (Lu et al. 2007) and seed characters (Dong et al. 2013), support Pseudobartsia as distinct and independent genus. Because the name Euphrasia glandulosa as priority over Pseudobartsia yunnanensis, Yu & Li in Yu et al. (2015) made a new combination Pseudobartsia glandulosa to replace the latter in the genus Pseudobartsia.

Orobanche mlokosiewiczii (Orobanchaceae): a new species from the Greater Caucasus, and nomenclatural notes on similar species

Phytotaxa ◽  
2017 ◽  
Vol 319 (2) ◽  
pp. 123 ◽  
Author(s):  
RENATA PIWOWARCZYK ◽  
ÓSCAR SÁNCHEZ PEDRAJA ◽  
GONZALO MORENO MORAL ◽  
MAGDALENA DENYSENKO-BENNETT ◽  
GRZEGORZ GÓRALSKI ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Endemic Species ◽  
Related Species ◽  
New Combination ◽  
Similar Species ◽  
Herbaceous Vegetation ◽  
Greater Caucasus ◽  
The Alps ◽  
A New Species

A new, probably endemic species, Orobanche mlokosiewiczii (Orobanchaceae) is described from Georgia, in the Greater Caucasus. The species grows near waterfalls, on slopes with thermo-hygrophilous subalpine tall herbaceous vegetation, and is exclusively parasitic of another endemic species: Aconitum cymbulatum. It is a graceful whitish or pale white-yellow plant, characterised by campanulate flowers and usually a very wide open throat of corolla. So far, for the Orobanche parasite on Aconitum (exlusively A. lycoctonum) only one species O. lycoctoni is known—occurring in the Cantabrian Mts. in Spain and in the Alps. A detailed description, diagnosis, illustrations, and comparison with possible related species (O. lycoctoni, O. krylowii, O. inulae, O. flava subsp. cicerbitae) are provided. We also present phylogenetic analysis, and nomenclatural notes about the above species, and a lectotype of O. inulae is designated. Moreover, inside the Orobanche sect. Orobanche, a new combination Orobanche subsect. Curvatae and a new series Orobanche ser. Krylowianae are proposed and their types are designated.

Where does Lecanora Demissa (Ascomycota, Lecanorales) Belong?

1999 ◽  
Vol 31 (5) ◽  
pp. 419-430 ◽  
Author(s):  
Ulf Arup ◽  
Martin Grube
Keyword(s):  
Phylogenetic Analysis ◽  
Type Species ◽  
Its Sequences ◽  
Chemical Data ◽  
New Combination ◽  
Sister Taxon ◽  
Nuclear Rdna ◽  
Its Regions

AbstractLecanora demissa (Körb.) Zahlbr. is a crustose, lobate lichen that produces soredia and conidiomata but no apothecia. Its placement in Lecanora has long been questioned but nothing better has been proposed. We have studied the nuclear rDNA of the ITS regions and the SSU of L. demissa. In an alignment of the ITS regions of several representatives of Lecanora s. lat. it could clearly be shown by a PAUP analysis, using Aspicilia caesiocinerea as outgroup, that L. demissa does not belong to Lecanora. In a PAUP analysis of sequences of the SSU from representatives of the order Lecanorales, using members of Saccharomycetales as outgroup, L. demissa clustered on a well-supported branch with Caloplaca chlorina. In a further analysis of the ITS sequences of L. demissa together with representatives of Caloplaca and Xanthoria using Protoparmelia as outgroup two most parsimonious trees were found. In these trees the L. demissa branch was well within a strongly supported clade with C. cerina, the type species of the genus Caloplaca. The sister taxon to L. demissa in this analysis was C. variabilis. Chemical data and characters of the conidiomata support the affinity with Caloplaca and the new combination C. demissa (Körb.) Arup & Grube is therefore proposed. A lectotype for Imbricaria demissa has been designated. The phylogenetic analysis of several representatives of the genera Caloplaca and Xanthoria suggests that these genera are not monophyletic as presently circumscribed. Two large, monophyletic groups of species could be recognized, one with Xanthoria species mixed with lobate and crustose members of Caloplaca, and one with mainly crustose Caloplaca, including both species with orange or black apothecia.

scholarly journals Molecular-phylogenetic analysis of the Cystopteridaceae family from North Asia based on plastid DNA loci

2020 ◽  
Author(s):  
D.O. Ulko ◽  
◽  
I.I. Gureyeva ◽  
R.S. Romanets ◽  
A.A. Kuznetsov ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Chloroplast Dna ◽  
Intergenic Spacer ◽  
Plastid Dna ◽  
Monotypic Genus ◽  
Phylogenetic Studies ◽  
North Asia ◽  
Matk Gene ◽  
Molecular Phylogenetic ◽  
Gymnocarpium Dryopteris

The results of molecular phylogenetic studies based on the sequencing of matK gene and trnG-R intergenic spacer of the chloroplast DNA and analysis of the concatenated data of these loci of North Asian representatives of the Cystopteridaceae family are presented. In the genus Gymnocarpium, a dryopteris-clade was distinguished including species without glandular pubescence of fronds – Gymnocarpium dryopteris. Species having glandular pubescent fronds have formed the robertianum-clade (G. robertianum and G. fedtschenkoanum), and 2 subclades, including G. continentale, G. jessoense, and G. tenuipes. In the genus Cystopteris, the analysis confirmed the separation of C. montana from other Cystopteris species, and the separation of C. sudetica from the C. fragilis-complex. This advocate the recognition of monotypic genus Rhizomatopteris including Rh. montana (≡Cystopteris montana), and allows to recognize the section Khokhrjakovia (with C. sudetica) within the genus Cystopteris. This analysis did not allow to separate the species of the type subgenus Cystopteris (C. fragilis-complex) from each other.

scholarly journals Structure, variation, and systematic implications of the hemipenes of liolaemid lizards (Reptilia: Liolaemidae)

2018 ◽  
Vol 96 (9) ◽  
pp. 987-995 ◽  
Author(s):  
M. Quipildor ◽  
A.S. Quinteros ◽  
F. Lobo
Keyword(s):  
Phylogenetic Analysis ◽  
Related Species ◽  
Phylogenetic Relationships ◽  
Proximal Region ◽  
Closely Related Species ◽  
Structure Variation ◽  
Phylogenetic Studies ◽  
Taxonomic Importance ◽  
Single Set

The structure of copulatory organs is widely used in systematics for both differentiating species and for studying phylogenetic relationships. We describe the hemipenes of 42 species belonging to the genus Liolaemus, representing most of their internal groups. We reported 42 characters, the majority not published previously. We constructed a metatree based on previously proposed phylogenetic studies and optimized the hemipenial characters in this topology. Among the most informative characters are presence or absence of flounces or calyces on the sulcate face, ornamentation of the apex, presence or absence of an asulcate face prominence, and presence of a thickening on the proximal region of the asulcate face. Furthermore, we performed a phylogenetic analysis exclusively with the hemipenial characters, not with the intention of making a phylogeny based on this single set of characters, but rather to demonstrate their significance for the reconstruction of relationships in Liolaemus. The obtained results show that the main clades are recovered. We also compared the hemipenial morphology between closely related species to evaluate its taxonomic importance. We conclude that in Liolaemus, the hemipenes can be used both for the differentiation of species and to provide additional evidence for establishing their phylogenetic relationships.

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Phytotaxa ◽  
2014 ◽  
Vol 163 (1) ◽  
pp. 1 ◽  
Author(s):  
Maria Amalia Scataglini ◽  
Sandra Aliscioni ◽  
Fernando Omar Zuloaga
Keyword(s):  
Phylogenetic Analysis ◽  
Taxonomic Position ◽  
Morphological Data ◽  
New Combination ◽  
Sister Taxon ◽  
Vascular Bundles ◽  
Font Size ◽  
Species Pair ◽  
Mestome Sheath ◽  
Incertae Sedis

Panicum scabridum, an incertae sedis species of Panicum s.l., is here included in the genus Coleataenia, following a phylogenetic analysis based on one new ndhF sequence of the species and associated morphological data. Panicum scabridum and species of Coleataenia are cespitose and perennial plants, with a lower glume (1–)3–5-nerved, 1/3 to 3/4 of the spikelet, upper glume and lower lemma 5–9-nerved, and upper anthecium smooth, shiny, and indurate. Within Coleataenia, P. scabridum appeared as the sister taxon of the species pair C. prionitis and C. petersonii; these three species are the only NADP-me taxa of tribe Paspaleae exhibiting two bundle sheaths around the vascular bundles, i.e., with an outer parenchymatous sheath and an inner mestome sheath with specialized chloroplasts. The new combination Coleataenia scabrida is proposed and a lectotype is designated.

Systematic revision of the feather mite genera Apexolichus Gaud et Atyeo and Titanolichus Gaud et Atyeo (Astigmata, Pterolichidae), parasites of parrots of the Old World (Psittaciformes, Psittacidae)

2008 ◽  
Vol 53 (1) ◽  
Author(s):  
Jacek Dabert ◽  
Serge Mironov ◽  
Rainer Ehrnsberger
Keyword(s):  
Phylogenetic Analysis ◽  
Sister Group ◽  
Junior Synonym ◽  
New Combination ◽  
Monotypic Genus ◽  
Feather Mites ◽  
Systematic Revision ◽  
Type Host ◽  
Two New Species ◽  
Host Associations

AbstractWe present a systematic revision and phylogenetic analysis of feather mites of the closely related genera Apexolichus Gaud et Atyeo, 1996 and Titanolichus Gaud et Atyeo, 1996 (Pterolichidae, Pterolichinae). New diagnoses for Apexolichus and Titanolichus and keys to all known species are provided. We redescribe all species of the genus Protolichus Mégnin et Trouessart, 1884, described by E. Trouessart over a century ago, and which have been transferred to these genera. Two new species are described: Apexolichus psephoti sp. nov. from Psephotus varius Clark A.H., 1910 (type host) and P. haematonotus (Gould, 1838); and Titanolichus triangulifer sp. nov. from Barnardius zonaris (Shaw, 1805) (type host) and Northiella haematogaster (Gould, 1838). New synonymies are proposed: Apexolichus splendens (Favette et Trouessart, 1904) syn. nov. is a junior synonym of A. velifer (Trouessart, 1899); A. distensis (Favette et Trouessart, 1904) syn. nov. is a junior synonym of A. affinis (Mégnin et Trouessart, 1884). Apexolichus platycerci (Mironov, Dabert et Proctor, 2003) comb. nov. is a new combination for this species, which was formerly placed in the genus Titanolichus. Phylogenetic analysis (MP) confirms the monophyly of the genera Apexolichus and Titanolichus. Both of these genera, together with the monotypic genus Sideroferus Gaud et Atyeo, 1996 (being a sister group of Titanolichus), form a clade within the Protolichus generic group and are restricted in their host associations to parrots of the tribe Platycercini (Psittacidae, Psittacinae), members of which occur in the Australia and Indo-Malayan region. Representatives of each genus are restricted to a particular genus or a few genera of Platycercini. Host associations of these genera are briefly discussed.

scholarly journals Arnebia purpurea: a new member of formerly monotypic genus Huynhia (Boraginaceae-Lithospermeae)

Phytotaxa ◽  
2015 ◽  
Vol 204 (2) ◽  
pp. 123 ◽  
Author(s):  
Andrea Coppi ◽  
Lorenzo Cecchi ◽  
Daniele Nocentini ◽  
Federico Selvi
Keyword(s):  
Sequence Data ◽  
Pollen Grains ◽  
Plastid Dna ◽  
Corolla Tube ◽  
Morphological Characters ◽  
New Combination ◽  
Monotypic Genus ◽  
Perennial Species ◽  
Dna Sequence Data ◽  
Equatorial Belt

The taxonomic position and affinities of the rare Turkish endemic Arnebia purpurea are analyzed using nuclear and plastid DNA sequence data and morphological characters. Phylogenetic analysis of a wide sample of old-world Lithospermeae consistently retrieved a clade with this species sister to Huynhia pulchra, the only member of the genus Huynhia. All other members of Arnebia s.l. (including Macrotomia) formed a separate clade subdivided in two lineages corresponding to the groups of the annual and the perennial species. Consequently, Arnebia does not appear monophyletic. Floral and palynological characters support the affinity of A. purpurea to Huynhia pulchra, in especially the stamens inserted at different heights in the corolla tube and the pollen grains with a single row of endoapertures along the equatorial belt. We therefore advocate the placement of A. purpurea in Huynhia and propose a new combination, implying that the latter is no longer a monotypic genus but includes two species with a sharply allopatric range in the Middle-East. Further studies with additional markers and a wider taxon sampling will help to elucidate relationships in Arnebia s.l..

scholarly journals Evolutionary significance of the blastozoan Eumorphocystis and its pseudo-arms

2020 ◽  
pp. 1-17
Author(s):  
Thomas E. Guensburg ◽  
James Sprinkle ◽  
Rich Mooi ◽  
Bertrand Lefebvre
Keyword(s):  
Phylogenetic Analysis ◽  
Sister Taxon ◽  
Evolutionary Significance ◽  
Coelomic Cavity ◽  
Anatomical Features ◽  
New Findings ◽  
Solid Block ◽  
Cover Plates

Abstract Twelve specimens of Eumorphocystis Branson and Peck, 1940 provide the basis for new findings and a more informed assessment of whether this blastozoan (a group including eocrinoids, blastoids, diploporites, rhombiferans) constitutes the sister taxon to crinoids, as has been recently proposed. Both Eumorphocystis and earliest-known crinoid feeding appendages express longitudinal canals, a demonstrable trait exclusive to these taxa. However, the specimen series studied here shows that Eumorphocystis canals constrict proximally and travel within ambulacrals above the thecal cavity. This relationship is congruent with a documented blastozoan pattern but very unlike earliest crinoid topology. Earliest crinoid arm cavities lie fully beneath floor plates; these expand and merge directly with the main thecal coelomic cavity at thecal shoulders. Other associated anatomical features echo this contrasting comparison. Feeding appendages of Eumorphocystis lack two-tiered cover plates, podial basins/pores, and lateral arm plating, all features of earliest crinoid ‘true arms.’ Eumorphocystis feeding appendages are buttressed by solid block-like plates added during ontogeny at a generative zone below floor plates, a pattern with no known parallel among crinoids. Eumorphocystis feeding appendages express brachioles, erect extensions of floor plates, also unknown among crinoids. These several distinctions point to nonhomology of most feeding appendage anatomy, including longitudinal canals, removing Eumorphocystis and other blastozoans from exclusive relationship with crinoids. Eumorphocystis further differs from crinoids in that thecal plates express diplopores, respiratory structures not present among crinoids, but ubiquitous among certain groups of blastozoans. Phylogenetic analysis places Eumorphocystis as a crownward blastozoan, far removed from crinoids.

Use of tall fescue EST-SSR markers in phylogenetic analysis of cool-season forage grasses

Genome ◽  
2005 ◽  
Vol 48 (4) ◽  
pp. 637-647 ◽  
Author(s):  
M A. Rouf Mian ◽  
Malay C Saha ◽  
Andrew A Hopkins ◽  
Zeng-Yu Wang
Keyword(s):  
Phylogenetic Analysis ◽  
Ssr Markers ◽  
Tall Fescue ◽  
Related Species ◽  
Grass Species ◽  
Forage Grass ◽  
Forage Grasses ◽  
Cool Season ◽  
Phylogenetic Relations ◽  
Wide Range

Microsatellites or simple sequence repeats (SSRs) are highly useful molecular markers for plant improvement. Expressed sequence tag (EST)-SSR markers have a higher rate of transferability across species than genomic SSR markers and are thus well suited for application in cross-species phylogenetic studies. Our objectives were to examine the amplification of tall fescue EST-SSR markers in 12 grass species representing 8 genera of 4 tribes from 2 subfamilies of Poaceae and the applicability of these markers for phylogenetic analysis of grass species. About 43% of the 145 EST-SSR primer pairs produced PCR bands in all 12 grass species and had high levels of polymorphism in all forage grasses studied. Thus, these markers will be useful in a variety of forage grass species, including the ones tested in this study. SSR marker data were useful in grouping genotypes within each species. Lolium temulentum, a potential model species for cool-season forage grasses, showed a close relation with the major Festuca–Lolium species in the study. Tall wheatgrass was found to be closely related to hexaploid wheat, thereby confirming the known taxonomic relations between these species. While clustering of closely related species was found, the effectiveness of such data in evaluating distantly related species needs further investigations. The phylogenetic trees based on DNA sequences of selected SSR bands were in agreement with the phylogenetic relations based on length polymorphism of SSRs markers. Tall fescue EST-SSR markers depicted phylogenetic relations among a wide range of cool-season forage grass species and thus are an important resource for researchers working with such grass species.Key words: phylogeny, EST-SSR, forage grasses, tall fescue.

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