scholarly journals An optimised method for correcting quenched fluorescence yield

2014 ◽  
Vol 11 (3) ◽  
pp. 1243-1264 ◽  
Author(s):  
L. Biermann ◽  
C. Guinet ◽  
M. Bester ◽  
A. Brierley ◽  
L. Boehme

Abstract. Under high light intensity, phytoplankton protect their photosystems from bleaching through non-photochemical quenching processes. The consequence of this is suppression of fluorescence emission, which must be corrected when measuring in situ yield with fluorometers. Previously, this has been done using the limit of the mixed layer, assuming that phytoplankton are uniformly mixed from the surface to this depth. However, the assumption of homogeneity is not robust in oceanic regimes that support deep chlorophyll maxima. To account for these features, we correct from the limit of the euphotic zone, defined as the depth at which light is at ~1% of the surface value. This method was applied to fluorescence data collected by eleven animal-borne fluorometers deployed in the Southern Ocean over four austral summers. Six tags returned data showing evidence of deep chlorophyll features. Using the depth of the euphotic layer, quenching was corrected without masking subsurface fluorescence signals.

Ocean Science ◽  
2015 ◽  
Vol 11 (1) ◽  
pp. 83-91 ◽  
Author(s):  
L. Biermann ◽  
C. Guinet ◽  
M. Bester ◽  
A. Brierley ◽  
L. Boehme

Abstract. Under high light intensity, phytoplankton protect their photosystems from bleaching through non-photochemical quenching processes. The consequence of this is suppression of fluorescence emission, which must be corrected when measuring in situ yield with fluorometers. We present data from the Southern Ocean, collected over five austral summers by 19 southern elephant seals tagged with fluorometers. Conventionally, fluorescence data collected during the day (quenched) were corrected using the limit of the mixed layer, assuming that phytoplankton are uniformly mixed from the surface to this depth. However, distinct deep fluorescence maxima were measured in approximately 30% of the night (unquenched) data. To account for the evidence that chlorophyll is not uniformly mixed in the upper layer, we propose correcting from the limit of the euphotic zone, defined as the depth at which photosynthetically available radiation is ~ 1% of the surface value. Mixed layer depth exceeded euphotic depth over 80% of the time. Under these conditions, quenching was corrected from the depth of the remotely derived euphotic zone Zeu, and compared with fluorescence corrected from the depth of the density-derived mixed layer. Deep fluorescence maxima were evident in only 10% of the day data when correcting from mixed layer depth. This was doubled to 21% when correcting from Zeu, more closely matching the unquenched (night) data. Furthermore, correcting from Zeu served to conserve non-uniform chlorophyll features found between the 1% light level and mixed layer depth.


2021 ◽  
Author(s):  
Zhen-Hui Kang ◽  
Yang Gou ◽  
Qi-Rui Deng ◽  
Zi-yu Hu ◽  
Guan-Rong Li

Abstract Presented here is the function analysis of a homolog of Arabidopsis SOQ1, OsSOQ1 in rice. Homozygous mutants (ossoq1) were obtained by CRISPR/Cas9 to knockout OsSOQ1. The mutants showed significant lower plant height, tiller number, panicle length, effective panicle, and grain number per panicle compared to the wild-type (WT). Western blot analysis showed that OsSOQ1 is a thylakoid membrane protein, with the thioredoxin-like (Trx-like) domain facing the lumen. Loss of OsSOQ1 did not significantly affect the protein level of photosystem II (PSII) subunits, but down-regulated the content of a non-photochemical quenching (NPQ) player PsbS, resulting in a low NPQ under high light intensity in the mutant. UPLC-MS/MS experiments showed that OsSOQ1 is involved in the fatty acid biosynthesis pathway of rice. The Trx-like domain possessed redox activity in vitro as shown by insulin assay; and in the yeast two-hybrid experiment, it was found that the Trx-like domain interacted with the chloroplast lipocalin OsLCNP, which usually binds lipid molecules. These findings revealed that the role of OsSOQ1 is to maintain the photochemical efficiency of PSII under high light intensity and regulate fatty acid metabolism in rice.


2009 ◽  
Vol 34 (12) ◽  
pp. 2196-2201 ◽  
Author(s):  
Xue-Li QI ◽  
Lin HU ◽  
Hai-Bin DONG ◽  
Lei ZHANG ◽  
Gen-Song WANG ◽  
...  

HortScience ◽  
1998 ◽  
Vol 33 (3) ◽  
pp. 541a-541
Author(s):  
Lailiang Cheng ◽  
Leslie H. Fuchigami ◽  
Patrick J. Breen

Bench-grafted Fuji/M26 apple trees were fertigated with different concentrations of nitrogen by using a modified Hoagland solution for 6 weeks, resulting in a range of leaf N from 1.0 to 4.3 g·m–2. Over this range, leaf absorptance increased curvilinearly from 75% to 92.5%. Under high light conditions (1500 (mol·m–2·s–1), the amount of absorbed light in excess of that required to saturate CO2 assimilation decreased with increasing leaf N. Chlorophyll fluorescence measurements revealed that the maximum photosystem II (PSII) efficiency of dark-adapted leaves was relatively constant over the leaf N range except for a slight drop at the lower end. As leaf N increased, non-photochemical quenching under high light declined and there was a corresponding increase in the efficiency with which the absorbed photons were delivered to open PSII centers. Photochemical quenching coefficient decreased significantly at the lower end of the leaf N range. Actual PSII efficiency increased curvilinearly with increasing leaf N, and was highly correlated with light-saturated CO2 assimilation. The fraction of absorbed light potentially used for free radical formation was estimated to be about 10% regardless of the leaf N status. It was concluded that increased thermal dissipation protected leaves from photo-oxidation as leaf N declined.


Cells ◽  
2021 ◽  
Vol 10 (8) ◽  
pp. 1916
Author(s):  
Myriam Canonico ◽  
Grzegorz Konert ◽  
Aurélie Crepin ◽  
Barbora Šedivá ◽  
Radek Kaňa

Light plays an essential role in photosynthesis; however, its excess can cause damage to cellular components. Photosynthetic organisms thus developed a set of photoprotective mechanisms (e.g., non-photochemical quenching, photoinhibition) that can be studied by a classic biochemical and biophysical methods in cell suspension. Here, we combined these bulk methods with single-cell identification of microdomains in thylakoid membrane during high-light (HL) stress. We used Synechocystis sp. PCC 6803 cells with YFP tagged photosystem I. The single-cell data pointed to a three-phase response of cells to acute HL stress. We defined: (1) fast response phase (0–30 min), (2) intermediate phase (30–120 min), and (3) slow acclimation phase (120–360 min). During the first phase, cyanobacterial cells activated photoprotective mechanisms such as photoinhibition and non-photochemical quenching. Later on (during the second phase), we temporarily observed functional decoupling of phycobilisomes and sustained monomerization of photosystem II dimer. Simultaneously, cells also initiated accumulation of carotenoids, especially ɣ–carotene, the main precursor of all carotenoids. In the last phase, in addition to ɣ-carotene, we also observed accumulation of myxoxanthophyll and more even spatial distribution of photosystems and phycobilisomes between microdomains. We suggest that the overall carotenoid increase during HL stress could be involved either in the direct photoprotection (e.g., in ROS scavenging) and/or could play an additional role in maintaining optimal distribution of photosystems in thylakoid membrane to attain efficient photoprotection.


2017 ◽  
Vol 129 (2) ◽  
pp. 209-221 ◽  
Author(s):  
Amritpal S. Singh ◽  
A. Maxwell P. Jones ◽  
Mukund R. Shukla ◽  
Praveen K. Saxena

Ethology ◽  
2012 ◽  
Vol 118 (4) ◽  
pp. 341-350 ◽  
Author(s):  
Esteban Fernández-Juricic ◽  
Marcella Deisher ◽  
Amy C. Stark ◽  
Jacquelyn Randolet

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