scholarly journals MODERN STEREOLOGICAL EVALUATION IN THE AGING HUMAN SUBSTANTIA NIGRA

2011 ◽  
Vol 22 (2) ◽  
pp. 73 ◽  
Author(s):  
Shuang Y Ma ◽  
Frank M Longo ◽  
Matias Röyttä ◽  
Yrjö Collan

Quantitative estimation of neuronal numbers in the human substantia nigra (SN) can be achieved by a conventional single section (SS) count or by the more modern stereological disector (DS) count. However, counting results from SS counts are potentially biased and might not accurately reflect the total neuronal number in the SN or the changes in the total number of neurons occurring during aging or with neurodegenerative disease. Potential sources of bias include the lack of linearity between cell number per area of section and cell number per volume; the variation in the counting level and orientation of tissue sections; and shrinkage of tissue. Modern stereological DS counting overcomes these problems and has played a crucial role in many recent studies in neuropathology, neuroanatomy, neuropharmacology and neurogenetics. Over the past decades, four stereology based counting methods including physical DS, physical fractionator, optical DS and optical fractionator, have been established for quantitative measurement. Recently, stereological estimates have revealed a linear reduction rate of total nigral neuronal numbers with age of about 10% per decade. These findings suggest that the surviving nigral neurons undergo a degenerative change leading to neuronal dysfunction with aging. Furthermore, as an advanced quantitative tool, modern stereological evaluation may provide new insights into the aging of the human SN thereby enabling us to better understand the pathophysiological processes in aging brain.

2007 ◽  
Vol 114 (4) ◽  
pp. 419-424 ◽  
Author(s):  
Thomas G. Beach ◽  
Lucia I. Sue ◽  
Douglas G. Walker ◽  
Lih Fen Lue ◽  
Donald J. Connor ◽  
...  

eLife ◽  
2017 ◽  
Vol 6 ◽  
Author(s):  
Yu Zhang ◽  
Kevin Michel-Herve Larcher ◽  
Bratislav Misic ◽  
Alain Dagher

We investigated the anatomical and functional organization of the human substantia nigra (SN) using diffusion and functional MRI data from the Human Connectome Project. We identified a tripartite connectivity-based parcellation of SN with a limbic, cognitive, motor arrangement. The medial SN connects with limbic striatal and cortical regions and encodes value (greater response to monetary wins than losses during fMRI), while the ventral SN connects with associative regions of cortex and striatum and encodes salience (equal response to wins and losses). The lateral SN connects with somatomotor regions of striatum and cortex and also encodes salience. Behavioral measures from delay discounting and flanker tasks supported a role for the value-coding medial SN network in decisional impulsivity, while the salience-coding ventral SN network was associated with motor impulsivity. In sum, there is anatomical and functional heterogeneity of human SN, which underpins value versus salience coding, and impulsive choice versus impulsive action.


Author(s):  
D. A. Sufieva ◽  
V. V. Guselnikova ◽  
D. E. Korzhevskii

Author(s):  
F. Thibaut ◽  
E.C. Hirsch ◽  
R. Raisman ◽  
F. Javoy-Agid ◽  
Y. Agid

2020 ◽  
Vol 19 (5) ◽  
pp. 839-851 ◽  
Author(s):  
Eva Griesser ◽  
Hannah Wyatt ◽  
Sara Ten Have ◽  
Birgit Stierstorfer ◽  
Martin Lenter ◽  
...  

Laser-capture microdissection (LCM) allows the visualization and isolation of morphologically distinct subpopulations of cells from heterogeneous tissue specimens. In combination with formalin-fixed and paraffin-embedded (FFPE) tissue it provides a powerful tool for retrospective and clinically relevant studies of tissue proteins in a healthy and diseased context. We first optimized the protocol for efficient LCM analysis of FFPE tissue specimens. The use of SDS containing extraction buffer in combination with the single-pot solid-phase-enhanced sample preparation (SP3) digest method gave the best results regarding protein yield and protein/peptide identifications. Microdissected FFPE human substantia nigra tissue samples (∼3,000 cells) were then analyzed, using tandem mass tag (TMT) labeling and LC-MS/MS, resulting in the quantification of >5,600 protein groups. Nigral proteins were classified and analyzed by abundance, showing an enrichment of extracellular exosome and neuron-specific gene ontology (GO) terms among the higher abundance proteins. Comparison of microdissected samples with intact tissue sections, using a label-free shotgun approach, revealed an enrichment of neuronal cell type markers, such as tyrosine hydroxylase and alpha-synuclein, as well as proteins annotated with neuron-specific GO terms. Overall, this study provides a detailed protocol for laser-capture proteomics using FFPE tissue and demonstrates the efficiency of LCM analysis of distinct cell subpopulations for proteomic analysis using low sample amounts.


2018 ◽  
Vol 28 (9) ◽  
pp. 1333-1343.e4 ◽  
Author(s):  
Jan Kamiński ◽  
Adam N. Mamelak ◽  
Kurtis Birch ◽  
Clayton P. Mosher ◽  
Michele Tagliati ◽  
...  

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