A paleolimnological investigation of agricultural intensification, water quality and ecosystem change at Lake Nganoke, southern Wairarapa, NZ

<p>Decreasing water quality of lakes as a result of anthropogenic landuse and specifically agricultural intensification is well documented in New Zealand. However, monitoring records of lake health are typically short, only commencing once signs of lake deterioration are observed. The shortness of the instrumental record precludes a detailed understanding of the relationship between landuse change, lake ecosystem trajectories and the effectiveness of mitigation strategies such as riparian planting. Paleolimnological reconstruction from sediment cores has the potential to develop high-resolution time series that may extend lake monitoring centuries into the past. This thesis uses paleoenvironmental reconstruction to investigate lake ecosystem change and water quality in Lake Nganoke, Wairarapa, New Zealand as a result of landuse intensification. The primary aim of this thesis is to reconstruct the past environment of Lake Nganoke from a pre-human reference state to the current day to assess: 1) how increased nutrient fluxes associated with landuse intensification have impacted the lake ecosystem; and 2) the ability of riparian zones to buffer these fluxes. The reconstruction was achieved using a multi proxy approach with pre and post-human environments of Lake Nganoke characterised using Palynology, geochemistry, eDNA and hyperspectral scanning. Māori land clearance was identified at ~AD 1450 (95% CI: AD 1417-1551). The appearance of Pinus pollen and increases in fertilisation and stocking rates placed European arrival at ~AD 1850 (95% CI: 1809 - 1870), while intensification of agricultural landuse occurred post ~AD 1950 (95% CI: 1948 - 1964). The prehuman environment of Lake Nganoke experienced little change, with the catchment dominated by tall trees and likely heavily forested. The lake ecosystem and water quality during this time showed little to no change, with algal productivity likely driven by a constant input of natural nutrients. Post Māori arrival, algal productivity was reduced suggesting an increase in water quality likely driven by added lake marginal plants providing a riparian buffer to terrestrially derived nutrients. Lake productivity increased dramatically post European arrival ~AD 1850, coeval with an increase in sediment Cd, suggesting that fertilisation may have driven a decline in water quality. Further increases in fertilisation and stocking rates indicate additional agricultural nutrient fluxes entering Lake Nganoke in AD 1950 when agriculture intensified. Abundances in denitrifying Gammaproteobacteria indicate increases in nutrient loading while bloom forming Cyanobacteria peak ~AD 2000 before declining till present. Riparian planting following Māori arrival appears sufficient to buffer the lake against increased terrestrial nutrient fluxes associated with land clearing. However, a riparian zone that covers the majority of the catchment post European settlement was inadequate in altering the lake’s degrading ecosystem and water quality trajectory.</p>

A paleolimnological investigation of agricultural intensification, water quality and ecosystem change at Lake Nganoke, southern Wairarapa, NZ

<p>Decreasing water quality of lakes as a result of anthropogenic landuse and specifically agricultural intensification is well documented in New Zealand. However, monitoring records of lake health are typically short, only commencing once signs of lake deterioration are observed. The shortness of the instrumental record precludes a detailed understanding of the relationship between landuse change, lake ecosystem trajectories and the effectiveness of mitigation strategies such as riparian planting. Paleolimnological reconstruction from sediment cores has the potential to develop high-resolution time series that may extend lake monitoring centuries into the past. This thesis uses paleoenvironmental reconstruction to investigate lake ecosystem change and water quality in Lake Nganoke, Wairarapa, New Zealand as a result of landuse intensification. The primary aim of this thesis is to reconstruct the past environment of Lake Nganoke from a pre-human reference state to the current day to assess: 1) how increased nutrient fluxes associated with landuse intensification have impacted the lake ecosystem; and 2) the ability of riparian zones to buffer these fluxes. The reconstruction was achieved using a multi proxy approach with pre and post-human environments of Lake Nganoke characterised using Palynology, geochemistry, eDNA and hyperspectral scanning. Māori land clearance was identified at ~AD 1450 (95% CI: AD 1417-1551). The appearance of Pinus pollen and increases in fertilisation and stocking rates placed European arrival at ~AD 1850 (95% CI: 1809 - 1870), while intensification of agricultural landuse occurred post ~AD 1950 (95% CI: 1948 - 1964). The prehuman environment of Lake Nganoke experienced little change, with the catchment dominated by tall trees and likely heavily forested. The lake ecosystem and water quality during this time showed little to no change, with algal productivity likely driven by a constant input of natural nutrients. Post Māori arrival, algal productivity was reduced suggesting an increase in water quality likely driven by added lake marginal plants providing a riparian buffer to terrestrially derived nutrients. Lake productivity increased dramatically post European arrival ~AD 1850, coeval with an increase in sediment Cd, suggesting that fertilisation may have driven a decline in water quality. Further increases in fertilisation and stocking rates indicate additional agricultural nutrient fluxes entering Lake Nganoke in AD 1950 when agriculture intensified. Abundances in denitrifying Gammaproteobacteria indicate increases in nutrient loading while bloom forming Cyanobacteria peak ~AD 2000 before declining till present. Riparian planting following Māori arrival appears sufficient to buffer the lake against increased terrestrial nutrient fluxes associated with land clearing. However, a riparian zone that covers the majority of the catchment post European settlement was inadequate in altering the lake’s degrading ecosystem and water quality trajectory.</p>

Sedimentary Organic Matter Shapes Macrofaunal Communities but Not Benthic Nutrient Fluxes in Contrasting Habitats Along the Northwest Atlantic Continental Margin

The heterogeneous topography of continental margins can influence patterns of resource availability and biodiversity in deep-sea sediments, potentially altering ecosystem functioning (e.g., organic matter remineralization). Noting a lack of studies that address the latter, we contrasted spatial patterns and drivers of benthic nutrient fluxes and multiple characteristics of macrofaunal communities in shelf, slope, canyon and inter-canyon sedimentary habitats along the Northwest Atlantic continental margin. Replicate sediment push cores were collected from 10 stations (229–996 m depth), incubated for ∼48 h to estimate fluxes of nitrate, nitrite, ammonium, phosphate, and silicate (as a measure of organic matter remineralization) and subsequently analyzed to characterize macrofaunal communities. We also considered various environmental factors, including sedimentary organic matter quantity and quality, and assessed their influence on fluxes and macrofauna. Comparatively high macrofaunal density and distinct community composition and trait expression characterized Georges Canyon, where elevated sedimentary organic matter suggested important lateral transport mechanisms along this canyon axis, with deposition of organic matter strongly affecting biological communities but not benthic nutrient fluxes. Lower penetration of macrofauna into the sediments, distinct community composition, biological traits, and higher nutrient flux rates characterized inter-canyon habitats compared to slope habitats at similar depths. Within inter-canyons, intermediate to low organic matter suggested hydrodynamic forces inhibiting organic matter deposition, affecting biological and functional processes. The input of fresh phytodetritus to the seafloor was the best predictor of macrofaunal density and diversity and contributed to variation in macrofaunal community composition and biological trait expression, together with latitude, depth, and other measures of organic matter quantity and quality. Benthic nutrient fluxes revealed complex variation, with disproportionate effects of few key macrofaunal taxa, together with bottom water oxygen concentration, and sediment granulometry. Our results suggest a relationship between resource availability and macrofaunal density, diversity, and taxonomic and trait composition, whereas organic matter remineralization exhibited a more complex response, which we suggest reflected variation in hydrodynamics and/or physical disturbance in heterogeneous continental margin habitats.

Substantial Sub-Surface Chlorophyll Patch Sustained by Vertical Nutrient Fluxes in Fram Strait Observed With an Autonomous Underwater Vehicle

We present results from a coordinated frontal survey in Fram Strait in summer 2016 using an autonomous underwater vehicle (AUV) combined with shipboard and zodiac-based hydrographic measurements. Based on satellite information, we identified a front between warm Atlantic Water and cold Polar Water. The AUV, equipped with oceanographic and biogeochemical sensors, profiled the upper 50 m along a 10 km-long cross-front oriented transect resulting in a high-resolution snapshot of the upper ocean. The transect was dominated by a 6 km-wide, 10 m-thick subsurface patch of high chlorophyll, located near the euphotic depth within a band of cold water. Nitrate was depleted in the surface, but abundant below the pycnocline. Potential vorticity and Richardson number estimates indicate conditions favorable for vertical mixing, which indicates that the high chlorophyll patch may have been sustained by upward nitrate fluxes. Our observations underline the complex hydrographic and biogeochemical structure in a region featuring fronts and meanders, and further underline the patchy and small-scale nature of subsurface phytoplankton blooms potentially fueled by submesoscale dynamics, which are easily missed by traditional surveys and satellite missions.

The relationship between benthic nutrient fluxes and bacterial community in Aquaculture tail-water treatment systems

Constructed-wetlands, Biofilms, and sedimentation are potential aquaculture tail-water treatments however their roles on the distribution of benthic microbial community and the way they affect the interaction between microbial community and inorganic nutrient fluxes have not been fully explored. This study applied 16S rRNA high-throughput sequencing technology to investigate the microbial community distribution and their link with nutrient fluxes in an aquaculture tail- water bioremediation system . Results showed that bacterial community compositions were significantly different in constructed-wetland and biofilm treatments (p<0.05) relative to sedimentation. The composition of the 16S rRNA genes among all the treatments was enriched with Proteobacteria, Bacteroidetes, Firmicutes, and Flavobacteria . NMDS analysis showed that the bacterial composition in constructed-wetland and biofilm samples clustered separately compared to those in sedimentation. The Functional-Annotation-of-Prokaryotic-Taxa analysis indicated that the proportions of sediment-microbial-functional groups (aerobic-chemoheterophy, chemoheterotrophy, and nitrate-ammonification combined) in the constructed-wetland treatment were 47%, 32% in biofilm and 13% in sedimentation system. Benthic-nutrient fluxes for phosphate, ammonium, nitrite, nitrate and sediment oxygen consumption differed markedly among the treatments ( p<0.05 ). Canonical correspondence analysis indicated constructed-wetland had the strongest association between biogeochemical contents and the bacterial community relative to other treatments. This study suggests that the microbial community distributions and their interactions nutrient fluxes were most improved in the constructed-wetland followed by the area under biofilm and sedimentation treatment.