hypervariable region i
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Genomics ◽  
2020 ◽  
Vol 112 (5) ◽  
pp. 3560-3564 ◽  
Author(s):  
Bassim Muften Ohied ◽  
Adnan Issa Al-Badran

Diversity ◽  
2020 ◽  
Vol 12 (6) ◽  
pp. 258
Author(s):  
Tatiana Fioravanti ◽  
Andrea Splendiani ◽  
Tommaso Righi ◽  
Nicola Maio ◽  
Sabrina Lo Brutto ◽  
...  

The Mediterranean monk seal (Monachus monachus) is one of the most endangered marine mammals in the world. This species has been threatened since ancient times by human activities and currently amounts to approximately 700 individuals distributed in the Eastern Mediterranean Sea (Aegean and Ionian Sea) and Eastern Atlantic Ocean (Cabo Blanco and Madeira). In other areas, where the species is considered “probably extinct”, an increase in sporadic sightings has been recorded during recent years. Sightings and accidental catches of Mediterranean monk seals have become more frequent in the Adriatic Sea, mainly in Croatia but also along the coasts of Montenegro, Albania and Southern Italy. A Mediterranean monk seal pup was recovered on 27 January 2020 on the beach of Torre San Gennaro in Torchiarolo (Brindisi, Apulia, Italy). DNA was extracted from a tissue sample and the hypervariable region I (HVR1) of the mitochondrial DNA control region was amplified and sequenced. The alignment performed with seven previous published haplotypes showed that the individual belongs to the haplotype MM03, common in monk seals inhabiting the Greek islands of the Ionian Sea. This result indicates the Ionian Islands as the most probable geographical origin of the pup, highlighting the need to intensify research and conservation activities on this species even in areas where it seemed to be extinct.


Data in Brief ◽  
2018 ◽  
Vol 17 ◽  
pp. 305-313
Author(s):  
Kapil Verma ◽  
Sapna Sharma ◽  
Arun Sharma ◽  
Jyoti Dalal ◽  
Tapeshwar Bhardwaj

2017 ◽  
Vol 96 (1) ◽  
pp. 119-125 ◽  
Author(s):  
ZHANJUN REN ◽  
HUILING CHEN ◽  
XUEJIAO YANG ◽  
CHENGDONG ZHANG

2015 ◽  
Vol 370 (1660) ◽  
pp. 20130385 ◽  
Author(s):  
Christine Keyser ◽  
Clémence Hollard ◽  
Angela Gonzalez ◽  
Jean-Luc Fausser ◽  
Eric Rivals ◽  
...  

This study is part of an ongoing project aiming at determining the ethnogenesis of an eastern Siberian ethnic group, the Yakuts, on the basis of archaeological excavations carried out over a period of 10 years in three regions of Yakutia: Central Yakutia, the Vilyuy River basin and the Verkhoyansk area. In this study, genetic analyses were carried out on skeletal remains from 130 individuals of unknown ancestry dated mainly from the fifteenth to the nineteenth century AD. Kinship studies were conducted using sets of commercially available autosomal and Y-chromosomal short tandem repeats (STRs) along with hypervariable region I sequences of the mitochondrial DNA. An unexpected and intriguing finding of this work was that the uniparental marker systems did not always corroborate results from autosomal DNA analyses; in some cases, false-positive relationships were observed. These discrepancies revealed that 15 autosomal STR loci are not sufficient to discriminate between first degree relatives and more distantly related individuals in our ancient Yakut sample. The Y-STR analyses led to similar conclusions, because the current Y-STR panels provided the limited resolution of the paternal lineages.


2014 ◽  
Vol 47 (3) ◽  
pp. 345-354 ◽  
Author(s):  
Padchanee Sangthong ◽  
Amporn Jansom ◽  
Nopparut Chinnabanchonchai

2010 ◽  
Vol 166 (1-2) ◽  
pp. 12-20 ◽  
Author(s):  
Kerstin Uhde-Holzem ◽  
Verena Schlösser ◽  
Sergei Viazov ◽  
Rainer Fischer ◽  
Ulrich Commandeur

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