Trophic niche overlap between coyotes and gray foxes in a temperate forest in Durango, Mexico

Resource partitioning, and especially dietary partitioning, is a mechanism that has been studied for several canid species as a means to understand competitive relationships and the ability of these species to coexist. Coyotes (Canis latrans) and gray foxes (Urocyon cinereoargenteus) are two canid species that are widely distributed, in Mexico, and they are sympatric throughout most of their distribution range. However, trophic dynamic and overlap between them have not been thoroughly studied. In order to better understand their ecological relationship and potential competitive interactions, we studied the trophic niche overlap between both canids in a temperate forest of Durango, Mexico. The results are based on the analysis of 540 coyote and 307 gray fox feces collected in 2018. Both species consumed a similar range of food items, but the coyote consumed large species while the gray fox did not. For both species, the most frequently consumed food categories throughout the year and seasonally were fruit and wild mammals (mainly rodents and lagomorphs). Coyotes had higher trophic diversity in their annual diet (H’ = 2.33) than gray foxes (H’ = 1.80). When analyzing diets by season, trophic diversity of both species was higher in winter and spring and tended to decrease in summer and autumn. When comparing between species, this parameter differed significantly during all seasons except for summer. Trophic overlap throughout the year was high (R0 = 0.934), with seasonal variation between R0 = 0.821 (autumn) and R0 = 0.945 (spring). Both species based their diet on the most available food items throughout each season of the year, having high dietary overlap which likely can lead to intense exploitative competition processes. However, differences in trophic diversity caused by differential prey use can mitigate competitive interactions, allowing these different sized canid species to coexist in the study area.

Spatial ecological interactions between coyote and gray fox in a temperate forest

Coyotes (Canis latrans) and gray foxes (Urocyon cinereoargenteus) are abundant and widely distributed in México, with no information currently available about their spatial interactions in the country. Our objectives were to evaluate the habitat use of these species and the environmental interactions between them throughout the overlapping areas of their home ranges in temperate forests of Durango, México. We expected that their coexistence would be facilitated by the spatial segregation of their ecological niche, exhibited by the low or nil overlap between their home ranges or by differentiated habitat use. Radio-collars (VHF) were attached to nine individuals — four coyotes (two males and two females) and five gray foxes (females) — that were radio-tracked from September 2017 to August 2019. We estimated their home ranges and the size of their core areas through the minimum convex polygon and determined the extent of overlap between them. Also, we evaluated third-order habitat selection and use based on habitat availability using Manly’s habitat-selection ratios and simultaneous Bonferroni confidence intervals (95 %). The mean home range size for coyotes was larger (12.2 ± 1.74 km2) than for gray boxes (5.3 ± 0.67 km2); the interspecific mean overlap was 42 % (moderate). Of these two canids, just the gray fox showed a markedly selective habitat use. Our findings revealed a moderate overlap between the home ranges of both canids, so spatial segregation did not occur. Although a differential habitat use was observed, explaining the coexistence between these two canids in the areas where they thrive, they tend to avoid agonistic interactions.

Mitochondrial Genomes of the United States Distribution of Gray Fox (Urocyon cinereoargenteus) Reveal a Major Phylogeographic Break at the Great Plains Suture Zone

We examined phylogeographic structure in gray fox (Urocyon cinereoargenteus) across the United States to identify the location of secondary contact zone(s) between eastern and western lineages and investigate the possibility of additional cryptic intraspecific divergences. We generated and analyzed complete mitochondrial genome sequence data from 75 samples and partial control region mitochondrial DNA sequences from 378 samples to investigate levels of genetic diversity and structure through population- and individual-based analyses including estimates of divergence (FST and SAMOVA), median joining networks, and phylogenies. We used complete mitochondrial genomes to infer phylogenetic relationships and date divergence times of major lineages of Urocyon in the United States. Despite broad-scale sampling, we did not recover additional major lineages of Urocyon within the United States, but identified a deep east-west split (∼0.8 million years) with secondary contact at the Great Plains Suture Zone and confirmed the Channel Island fox (Urocyon littoralis) is nested within U. cinereoargenteus. Genetic diversity declined at northern latitudes in the eastern United States, a pattern concordant with post-glacial recolonization and range expansion. Beyond the east-west divergence, morphologically-based subspecies did not form monophyletic groups, though unique haplotypes were often geographically limited. Gray foxes in the United States displayed a deep, cryptic divergence suggesting taxonomic revision is needed. Secondary contact at a common phylogeographic break, the Great Plains Suture Zone, where environmental variables show a sharp cline, suggests ongoing evolutionary processes may reinforce this divergence. Follow-up study with nuclear markers should investigate whether hybridization is occurring along the suture zone and characterize contemporary population structure to help identify conservation units. Comparative work on other wide-ranging carnivores in the region should test whether similar evolutionary patterns and processes are occurring.

Mesocarnivore landscape use along a gradient of urban, rural, and forest cover

Mesocarnivores fill a vital role in ecosystems through effects on community health and structure. Anthropogenic-altered landscapes can benefit some species and adversely affect others. For some carnivores, prey availability increases with urbanization, but landscape use can be complicated by interactions among carnivores as well as differing human tolerance of some species. We used camera traps to survey along a gradient of urban, rural, and forest cover to quantify how carnivore landscape use varies among guild members and determine if a species was a human exploiter, adapter, or avoider. Our study was conducted in and around Corvallis, Oregon from April 2018 to February 2019 (11,914 trap nights) using 47 camera trap locations on a gradient from urban to rural. Our focal species were bobcat (Lynx rufus), coyote (Canis latrans), gray fox (Urocyon cinereoargenteus), opossum (Didelphis virginiana), raccoon (Procyon lotor), and striped skunk (Mephitis mephitis). Raccoon and opossum were human exploiters with low use of forest cover and positive association with urban and rural developed areas likely due to human-derived resources as well as some refugia from larger predators. Coyote and gray fox were human adapters with high use of natural habitats while the effects of urbanization ranged from weak to indiscernible. Bobcat and striped skunk appeared to be human avoiders with negative relationship with urban cover and higher landscape use of forest cover. We conducted a diel temporal activity analysis and found mostly nocturnal activity within the guild, but more diurnal activity by larger-bodied predators compared to the smaller species. Although these species coexist as a community in human-dominated landscapes throughout much of North America, the effects of urbanization were not equal across species. Our results, especially for gray fox and striped skunk, are counter to research in other regions, suggesting that mesopredator use of urbanized landscapes can vary depending on the environmental conditions of the study area and management actions are likely to be most effective when decisions are based on locally derived data.

Relative abundance of coyotes influences gray fox occupancy across the eastern United States

Gray fox (Urocyon cinereoargenteus Schreber, 1775) populations in portions of the eastern United States have experienced declines whose trajectories differ from those of other mesocarnivore populations. One hypothesis is that gray fox declines may result from interspecific interactions, particularly competition with abundant coyotes (Canis latrans Say, 1823). Alternatively, gray foxes may respond negatively to increased urbanization and reduced forest cover. To evaluate these hypotheses, we used single-species occupancy models of camera trap data to test the effects of habitat covariates, such as the amount of urbanization and forest, on coyote and gray fox occupancy. Additionally, we test the effect of an n-mixture based index of the number of coyotes at each camera trap site on gray fox occupancy. Results indicate that occupancy probabilities of coyote and gray fox relate positively to the amount of forest, but they provided no evidence urban cover impacts gray foxes. Additionally, gray fox occupancy was negatively related to the index of the number of coyotes at each site. Our models support the idea that interactions with coyotes impact gray fox occupancy across the eastern U.S. These results illustrate how large scale studies can relate mechanisms identified within specific landscapes to phenomena observed at larger scales.

Concurrent Infection of Skunk Adenovirus-1, Listeria monocytogenes, and a Regionally Specific Clade of Canine Distemper Virus in One Gray Fox (Urocyon cinereoargenteus) and Concurrent Listeriosis and Canine Distemper in a Second Gray Fox

One free-ranging Gray fox (Urocyon cinereoargenteus) underwent autopsy following neurologic disease, with findings including morbilliviral inclusions and associated lesions in numerous tissues, adenoviral intranuclear inclusions in bronchial epithelial cells, and septic pleuropneumonia, hepatitis, splenitis, and meningoencephalitis. Molecular diagnostics on fresh lung identified a strain within a distinct clade of canine distemper that is currently unique to wildlife in New England, as well as the emerging multi-host viral pathogen skunk adenovirus-1. Bacterial culture of fresh liver resulted in a pure growth of Listeria monocytogenes, with whole genome sequencing indicating that the isolate had a vast array of antimicrobial resistance and virulence-associated genes. One year later, a second fox was euthanized for inappropriate behavior in a residential area, and diagnostic workup revealed canine distemper and septic L. monocytogenes, with the former closely related to the distemper virus found in the previous fox and the latter divergent from the L. monocytogenes from the previous fox.

Primer registro municipal de zorra gris (Urocyon cinereoargenteus) en Santiago Ixcuintla, Nayarit, México

ResumenEn febrero de 2019 se fotografió con cámaras trampa un ejemplar de zorra gris (Urocyon cinereoargenteus) 2.4 kilómetros al sur de Los Corchos, Municipio de Santiago Ixcuintla, Nayarit, México. Este representa el primer registro de zorra gris en el municipio de Santiago Ixcuintla y el segundo en la llanura costera del Pacífico de Nayarit, lo que extiende su distribución 88 km al sur del registro de Tecuala y a 48 km al norte de San Blas, Nayarit.Palabras clave: carnivora, fototrampeo, llanura costera del Pacífico, Nayarit, Urocyon cinereoargenteus.AbstractIn February 2019, a specimen of gray fox (Urocyon cinereoargenteus) was photographed with camera traps 2.4 kilometers south of Los Corchos, Municipality of Santiago Ixcuintla, Nayarit, Mexico. This represents the first record of the gray fox for the Municipality of Santiago Ixcuintla and the second for the Pacific coastal plain of Nayarit, extending its distribution 88 km south of record from Tecuala and 48 km north of San Blas, Nayarit.Key words: camera trapping, carnivora, Nayarit, Pacific coastal plain, Urocyon cinereoargenteus.