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Chemistry ◽  
2021 ◽  
Vol 3 (1) ◽  
pp. 411-439
Author(s):  
Ana Maria Toader ◽  
Maria Cristina Buta ◽  
Fanica Cimpoesu ◽  
Andrei-Iulian Toma ◽  
Christina Marie Zalaru ◽  
...  

We present a series of pyrazolato-bridged copper complexes with interesting structures that can be considered prototypic patterns for tri-, hexa- and hepta- nuclear systems. The trinuclear shows an almost regular triangle with a μ3-OH central group. The hexanuclear has identical monomer units, the Cu6 system forming a regular hexagon. The heptanuclear can be described as two trinuclear moieties sandwiching a central copper ion via carboxylate bridges. In the heptanuclear system, the pyrazolate bridges are consolidating the triangular faces, which are sketching an elongated trigonal antiprism. The magnetic properties of these systems, dominated by the strong antiferromagnetism along the pyrazolate bridges, were described transparently, outlining the energy levels formulas in terms of Heisenberg exchange parameters J, within the specific topologies. We succeeded in finding a simple Kambe-type resolution of the Heisenberg spin Hamiltonian for the rather complex case of the heptanuclear. In a similar manner, the weak intermolecular coupling of two trimer units (aside from the strong exchange inside triangles) was resolved by closed energy formulas. The hexanuclear can be legitimately proposed as a case of coordination-based aromaticity, since the phenomenology of the six-spins problem resembles the bonding in benzene. The Broken-Symmetry Density Functional Theory (BS-DFT) calculations are non-trivial results, being intrinsically difficult at high nuclearities.


eLife ◽  
2020 ◽  
Vol 9 ◽  
Author(s):  
Genjiro Suzuki ◽  
Sei Imura ◽  
Masato Hosokawa ◽  
Ryu Katsumata ◽  
Takashi Nonaka ◽  
...  

Abnormal α-synuclein aggregation has been implicated in several diseases and is known to spread in a prion-like manner. There is a relationship between protein aggregate structure (strain) and clinical phenotype in prion diseases, however, whether differences in the strains of α-synuclein aggregates account for the different pathologies remained unclear. Here, we generated two types of α-synuclein fibrils from identical monomer and investigated their seeding and propagation ability in mice and primary-cultured neurons. One α-synuclein fibril induced marked accumulation of phosphorylated α-synuclein and ubiquitinated protein aggregates, while the other did not, indicating the formation of α-synuclein two strains. Notably, the former α-synuclein strain inhibited proteasome activity and co-precipitated with 26S proteasome complex. Further examination indicated that structural differences in the C-terminal region of α-synuclein strains lead to different effects on proteasome activity. These results provide a possible molecular mechanism to account for the different pathologies induced by different α-synuclein strains.


2020 ◽  
Author(s):  
Genjiro Suzuki ◽  
Sei Imura ◽  
Masato Hosokawa ◽  
Ryu Katsumata ◽  
Takashi Nonaka ◽  
...  

AbstractAbnormal α-synuclein aggregation has been implicated in several diseases and is known to spread in a prion-like manner. There is a relationship between protein aggregate structure (strain) and clinical phenotype in prion diseases, however, whether differences in the strains of α-synuclein aggregates account for the different pathologies remained unclear. Here, we generated two types of α-synuclein fibrils from identical monomer and investigated their seeding and propagation ability in mice and primary-cultured neurons. One α-synuclein fibril induced marked accumulation of phosphorylated α-synuclein and ubiquitinated protein aggregates, while the other did not, indicating the formation of α-synuclein two strains. Notably, the former α-synuclein strain inhibited proteasome activity and co-precipitated with 26S proteasome complex. Further examination indicated that structural differences in the C-terminal region of α-synuclein strains lead to different effects on proteasome activity. These results provide a possible molecular mechanism to account for the different pathologies induced by different α-synuclein strains.


Life ◽  
2020 ◽  
Vol 10 (2) ◽  
pp. 12 ◽  
Author(s):  
Alex Spaeth ◽  
Mason Hargrave

Implicit in the RNA world hypothesis is that prebiotic RNA synthesis, despite occurring in an environment without biochemical catalysts, produced the long RNA polymers which are essential to the formation of life. In order to investigate the prebiotic formation of long RNA polymers, we consider a general solution of functionally identical monomer units that are capable of bonding to form linear polymers by a step-growth process. Under the assumptions that (1) the solution is well-mixed and (2) bonding/unbonding rates are independent of polymerization state, the concentration of each length of polymer follows the geometric Flory-Schulz distribution. We consider the rate dynamics that produce this equilibrium; connect the rate dynamics, Gibbs free energy of bond formation, and the bonding probability; solve the dynamics in closed form for the representative special case of a Flory-Schulz initial condition; and demonstrate the effects of imposing a maximum polymer length. Afterwards, we derive a lower bound on the error introduced by truncation and compare this lower bound to the actual error found in our simulation. Finally, we suggest methods to connect these theoretical predictions to experimental results.


2003 ◽  
Vol 771 ◽  
Author(s):  
Petra Herguth ◽  
Joo Hyun Kim ◽  
Xuezhong Jiang ◽  
Michelle S. Liu ◽  
Alex K-Y. Jen

AbstractThe emission wavelength in conjugated copolymers is determined by the various monomers used, their sequence in the polymer backbone, the effective conjugation length of the material, and intra- and intermolecular interactions of the different units. This paper will discuss the influence of conjugation length as well as the influence of intramolecular charge-transfer on the absorption and emission properties. Fluorene, benzothiadiazole and a third comonomer (fluorene, xylene or triphenylamine) were used as building blocks. The influence of monomer sequence is probed as well by comparing sequentially random copolymers to their sequentially defined ones with identical monomer ratios. Model oligomers were also made for comparison.


Author(s):  
Afzana Anwer ◽  
S. Eilidh Bedford ◽  
Richard J. Spontak ◽  
Alan H. Windle

Random copolyesters composed of wholly aromatic monomers such as p-oxybenzoate (B) and 2,6-oxynaphthoate (N) are known to exhibit liquid crystalline characteristics at elevated temperatures and over a broad composition range. Previous studies employing techniques such as X-ray diffractometry (XRD) and differential scanning calorimetry (DSC) have conclusively proven that these thermotropic copolymers can possess a significant crystalline fraction, depending on molecular characteristics and processing history, despite the fact that the copolymer chains possess random intramolecular sequencing. Consequently, the nature of the crystalline structure that develops when these materials are processed in their mesophases and subsequently annealed has recently received considerable attention. A model that has been consistent with all experimental observations involves the Non-Periodic Layer (NPL) crystallite, which occurs when identical monomer sequences enter into register between adjacent chains. The objective of this work is to employ electron microscopy to identify and characterize these crystallites.


1948 ◽  
Vol 21 (2) ◽  
pp. 452-460
Author(s):  
A. E. Juve ◽  
M. M. Goff ◽  
C. H. Schroeder ◽  
A. W. Meyer ◽  
M. C. Brooks

Abstract Sodium-catalyzed butadiene-styrene copolymers (S-BS), of composition 75 weight-per cent butadiene: 25 weight-per cent styrene, have been compounded in tread type recipes. Evaluation tests showed properties significantly different from those of GR-S, the emulsion-phase free radical—catalyzed copolymers of identical monomer composition. 1. The processing characteristics of S-BS are considerably superior to those of GR-S, although one experience with a high temperature internal mix may indicate some limitation. Objective laboratory processing tests show that S-BS resembles high-styrene emulsion copolymers in that it can be satisfactorily fabricated from stocks containing less filler than is required in GR-S stocks for similar uses. 2. Stress-strain properties based on limited compounding studies are similar to those of GR-S. 3. The flex crack growth—hysteresis balance for S-BS vulcanizates is much superior to that of GR-S vulcanizates. Vulcanizates of emulsion polymers of high styrene content also had a flex crack growth—hysteresis balance superior to that of GR-S vulcanizates. 4. The low temperature properties of S-BS vulcanizates are inferior to those of GR-S vulcanizates. Brittle points and low temperature Young's modulus of S-BS vulcanizates are much higher than those of GR-S vulcanizates.


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