Water Thermodynamics and Its Effects on the Protein Stability and Activity

We discuss a phenomenon regarding water that was until recently a subject of scientific interest: i.e., the dynamical crossover, from the fragile to strong glass forming material, for both bulk and protein hydration water. Such crossover is characterized by a temperature TL in which significant dynamical changes like the decoupling (or the violation of the Stokes-Einstein relation) of homologous transport parameters, e.g., the density relaxation time τ and the viscosity η, occur in the system. On this respect we considered the dynamic properties of water-protein systems. More precisely, we focused our study on proteins and their hydration water, as far as bulk and confined water. In order to clarify the effects of the water dynamical crossover on the protein properties we considered and discussed in a comparative way previous and new experimental data, obtained from different techniques and molecular dynamic simulation (MD). We pointed out the reasons for different dynamical findings from the use of different experimental techniques.

Similarity between the kinematic viscosity of quark-gluon plasma and liquids at the viscosity minimum

Recently, it has been found that the kinematic viscosity of liquids at the minimum, \nu_mνm, can be expressed in terms of fundamental physical constants, giving \nu_mνm on the order of 10^{-7}~{m^2/s}10−7m2/s. Here, we show that the kinematic viscosity of quark-gluon plasma (QGP) has a similar value and support this finding by experimental data and theoretical estimations. The similarity is striking, given that the dynamic viscosity and the density of QGP are about 16 orders of magnitude larger than in liquids and that the two systems have disparate interactions and fundamental theories. We discuss the implications of this result for understanding the QGP including the similarity of flow and particle dynamics at the viscosity minimum, the associated dynamical crossover and universality of shear diffusivity.

Transverse Density Fluctuations around the Ground State Distribution of Counterions near One Charged Plate: Stochastic Density Functional View

We consider the Dean–Kawasaki (DK) equation of overdamped Brownian particles that forms the basis of the stochastic density functional theory. Recently, the linearized DK equation has successfully reproduced the full Onsager theory of symmetric electrolyte conductivity. In this paper, the linear DK equation is applied to investigate density fluctuations around the ground state distribution of strongly coupled counterions near a charged plate, focusing especially on the transverse dynamics along the plate surface. Consequently, we find a crossover scale above which the transverse density dynamics appears frozen and below which diffusive behavior of counterions can be observed on the charged plate. The linear DK equation provides a characteristic length of the dynamical crossover that is similar to the Wigner–Seitz radius used in equilibrium theory for the 2D one-component plasma, which is our main result. Incidentally, general representations of longitudinal dynamics vertical to the plate further suggest the existence of advective and electrical reverse-flows; these effects remain to be quantitatively investigated.