An Assessment of Genetic Diversity Within a Collection of Cassava (Manihot esculenta Crantz) Germplasm Using Molecular Markers

1993 ◽  
Vol 72 (6) ◽  
pp. 515-520 ◽  
Author(s):  
J Beeching
Keyword(s):  
Genetic Diversity ◽  
Molecular Markers ◽  
Manihot Esculenta ◽  
Manihot Esculenta Crantz

ANALYSIS OF GENETIC DIVERSITY OF 26 CASSAVA VARIETIES (Manihot esculenta CRANTZ) WITH DIFFERENT RESPONSES TO WATERLOGGING CONDITIONS BY USING RAPD MARKERS

2021 ◽  
Vol 66 (3) ◽  
pp. 170-179
Author(s):  
Sengsoulichan Dethvongsa ◽  
Vu Nguyen Anh ◽  
Van Tran Khanh
Keyword(s):  
Genetic Diversity ◽  
Phylogenetic Tree ◽  
Manihot Esculenta ◽  
Rapd Markers ◽  
Flood Tolerance ◽  
Randomly Amplified Polymorphic Dna ◽  
Manihot Esculenta Crantz ◽  
Rapd Pcr ◽  
Cassava Production ◽  
Cassava Varieties

RAPD (Randomly Amplified Polymorphic DNA) is an indicator for high and stable polymorphism, widely used in the study of the diversity of cassava. In this paper, the results of using 20 polymorphic primers OPK combined with the establishment of the phylogenetic tree to analyze the genetic diversity of 26 cassava varieties with different responses to waterlogging conditions by using the RAPD-PCR technique were presented. The purpose of this experiment was to show the genetic relevance of the studied cassava varieties. The results showed that the flood tolerance of cassava was not related to the polymorphism and branching characteristics of the stem. This information may be use as a basis for selecting flood-tolerant cassava varieties for cassava production, as well as the basis for selecting genetically different parents for breeding.

scholarly journals Genetic Diversity of Cassava (Manihot esculenta Crantz) Genotypes in Ethiopia

2013 ◽  
Vol 3 (9) ◽  
pp. 636-642 ◽  
Author(s):  
Mulualem Tewodros ◽  
◽  
WeldeMichael Getachew ◽  
Benti Tadesse ◽  
Walle Tesfaye ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Manihot Esculenta ◽  
Manihot Esculenta Crantz

scholarly journals Physical localization of molecular markers and assignment of the 15th linkage group to chromosome 11 of the karyotype in cassava (Manihot esculenta Crantz) by primed in situ labeling

2015 ◽  
Vol 14 (3) ◽  
pp. 8366-8374
Author(s):  
Y. Wang ◽  
J.F. Wang ◽  
H. Yin ◽  
H.Q. Gao ◽  
N.S. Zhuang ◽  
...  
Keyword(s):  
Molecular Markers ◽  
Linkage Group ◽  
Manihot Esculenta ◽  
Chromosome 11 ◽  
Manihot Esculenta Crantz

scholarly journals Selective signatures and high genome-wide diversity in traditional Brazilian manioc (Manihot esculenta Crantz) varieties

2021 ◽  
Author(s):  
Alessandro Alves-Pereira ◽  
Maria Imaculada Zucchi ◽  
Charles R. Clement ◽  
João Paulo Gomes Viana ◽  
José Baldin Pinheiro ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Genetic Resources ◽  
Manihot Esculenta ◽  
Evolutionary Dynamics ◽  
Raw Material ◽  
Nucleotide Polymorphisms ◽  
Manihot Esculenta Crantz ◽  
Genome Wide ◽  
Neutral Genetic Diversity ◽  
Effective Use

Knowledge about crops' genetic diversity is essential to promote effective use and conservation of their genetic resources, because genetic diversity enables farmers to adapt their crops to specific needs and is the raw material for breeding efforts. Currently, manioc (Manihot esculenta ssp. esculenta) is one of the most important food crops in the world and has the potential to help achieve food security in the context of on-going climate changes. In this study we assessed the patterns of genome-wide diversity of traditional Brazilian manioc varieties conserved in the gene bank of the Luiz de Queiroz College of Agriculture, University of São Paulo. We used single nucleotide polymorphisms to evaluate the organization of genetic diversity and to identify selective signatures contrasting varieties from different biomes with samples of manioc's wild relative M. esculenta ssp. flabellifolia. We identified signatures of selection putatively associated with resistance genes, plant development and response to abiotic stresses. This presumed adaptive variation might have been important for the initial domestication and for the crop's diversification in response to cultivation in different environments. The neutral variation revealed high levels of genetic diversity within groups of varieties from different biomes and low to moderate genetic divergence among biomes. These results reflect the complexity of manioc's biology and its evolutionary dynamics under traditional cultivation. Our results exemplify how the smallholder practices contribute to the conservation of manioc's genetic resources, maintaining variation of potential adaptive significance and high levels of neutral genetic diversity.

Genetic Diversity of Traditional South American Landraces of Cassava (Manihot Esculenta Crantz): An Analysis Using Microsatellites

2004 ◽  
Vol 58 (2) ◽  
pp. 242-256 ◽  
Author(s):  
Marianne Elias ◽  
Gilda Santos Mühlen ◽  
Doyle McKey ◽  
Ana Carolina Roa ◽  
Joe Tohme
Keyword(s):  
Genetic Diversity ◽  
Manihot Esculenta ◽  
South American ◽  
Manihot Esculenta Crantz

scholarly journals Genetic diversity characterization of cassava cultivars (Manihot esculenta Crantz).: I) RAPD markers

1998 ◽  
Vol 21 (1) ◽  
pp. 105-113 ◽  
Author(s):  
Carlos Colombo ◽  
Gérard Second ◽  
Tereza Losada Valle ◽  
André Charrier
Keyword(s):  
Genetic Diversity ◽  
Multivariate Analysis ◽  
Genetic Variability ◽  
Manihot Esculenta ◽  
Core Collection ◽  
Rapd Markers ◽  
Manihot Esculenta Crantz ◽  
Important Resource ◽  
Flour Production

RAPD markers were used to investigate the genetic diversity of 31 Brazilian cassava clones. The results were compared with the genetic diversity revealed by botanical descriptors. Both sets of variates revealed identical relationships among the cultivars. Multivariate analysis of genetic similarities placed genotypes destinated for consumption "in nature" in one group, and cultivars useful for flour production in another. Brazil’s abundance of landraces presents a broad dispersion and is consequently an important resource of genetic variability. The botanical descriptors were not able to differentiate thirteen pairs of cultivars compared two-by-two, while only one was not differentiated by RAPD markers. These results showed the power of RAPD markers over botanical descriptors in studying genetic diversity, identifying duplicates, as well as validating, or improving a core collection. The latter is particularly important in this vegetatively propagated crop.

scholarly journals Genetic Diversity of Cassava (Manihot esculenta Crantz) in Ecuador by Using SSR Markers

2021 ◽  
Author(s):  
Nelly Paredes ◽  
Valeria Alulema ◽  
Luis Lima ◽  
Marten Sørensen ◽  
and Álvaro Monteros-Altamirano
Keyword(s):  
Genetic Diversity ◽  
Manihot Esculenta ◽  
Staple Food ◽  
Ethnic Communities ◽  
Manihot Esculenta Crantz ◽  
Wide Range ◽  
Ssr Primers ◽  
Amazonian Region

Cassava (Manihot esculenta Crantz), domesticated in the Amazonian region of South America, presents an important diversity in Ecuador, where it is a main staple food; however, only few Ecuadorian cassava accessions have been included in international molecular assessments. The purpose of this study was to apply suitable cassava mi-crosatellites to characterize the genetic variability of the Ecuadorian cassava collection composed mainly of local landraces from the Coast, Andes and Amazonia regions. The use of microsatellite markers allowed the determination of the genetic diversity of the collection. Seven selected SSR primers, permitted to identify homozygous and hetero-zygous materials within the cassava collection of 133 accessions. The loci presented an average genetic diversity value of 0.7 and an average PIC value of 0.67, which is con-sidered high. Low number of duplicates (8.8%) were identified in the Ecuadorian col-lection which is not fully duplicated at CIAT. Currently, a wide range of cassava diver-sity is still cultivated in multi-crop agro-ecosystem, mainly in the Coast and Amazo-nian regions. Especially in the Amazonian region, due to important cultural uses of cassava by local ethnic communities, more in depth studies in the region could unveil the genetic diversity present in situ today.

Enzymatic polymorphism of genetic diversity in cassava (Manihot esculenta Crantz) accessions in Côte d’Ivoire

2015 ◽  
Vol 2 (1) ◽  
pp. 009-017
Author(s):  
Kouablan Edmond Koffi ◽  
◽  
Kouassi Guy Brou ◽  
Kan Modeste Koussi ◽  
Ahou-yah Gisèle Koua ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Cote D'ivoire ◽  
Manihot Esculenta ◽  
Côte D’Ivoire ◽  
Manihot Esculenta Crantz ◽  
Cote D’Ivoire ◽  
Côte D'ivoire

Starch content and cassava mosaic disease genetic diversity with relation to yield in south Indian cassava (Manihot esculenta Crantz) germplasm

2011 ◽  
Vol 14 (3) ◽  
pp. 179-189 ◽  
Author(s):  
Raghu Duraisamy ◽  
Sakthi Ambothi Rathinasamy ◽  
Senthil Natesan ◽  
Raveendran Muthurajan ◽  
Jana Jeevan Ramineni ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Manihot Esculenta ◽  
Starch Content ◽  
Mosaic Disease ◽  
Cassava Mosaic Disease ◽  
Manihot Esculenta Crantz ◽  
South Indian

Genetic diversity of Manihot esculenta Crantz germplasm based on single-nucleotide polymorphism markers

2018 ◽  
Vol 173 (3) ◽  
pp. 271-284 ◽  
Author(s):  
Hilçana Ylka Gonçalves de Albuquerque ◽  
Catia Dias do Carmo ◽  
Ana Carla Brito ◽  
Eder Jorge de Oliveira
Keyword(s):  
Genetic Diversity ◽  
Single Nucleotide Polymorphism ◽  
Manihot Esculenta ◽  
Nucleotide Polymorphism ◽  
Manihot Esculenta Crantz ◽  
Single Nucleotide
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