ANALYSIS OF GENETIC DIVERSITY OF 26 CASSAVA VARIETIES (Manihot esculenta CRANTZ) WITH DIFFERENT RESPONSES TO WATERLOGGING CONDITIONS BY USING RAPD MARKERS

RAPD (Randomly Amplified Polymorphic DNA) is an indicator for high and stable polymorphism, widely used in the study of the diversity of cassava. In this paper, the results of using 20 polymorphic primers OPK combined with the establishment of the phylogenetic tree to analyze the genetic diversity of 26 cassava varieties with different responses to waterlogging conditions by using the RAPD-PCR technique were presented. The purpose of this experiment was to show the genetic relevance of the studied cassava varieties. The results showed that the flood tolerance of cassava was not related to the polymorphism and branching characteristics of the stem. This information may be use as a basis for selecting flood-tolerant cassava varieties for cassava production, as well as the basis for selecting genetically different parents for breeding.

Snorkeling Strategy: Tolerance to Flooding in Rice and Potential Application for Weed Management

Flooding is an important strategy for weed control in paddy rice fields. However, terrestrial weeds had evolved mechanisms of tolerance to flooding, resulting in new ‘snorkeling’ ecotypes. The aim of this review is to discuss the mechanisms of flooding tolerance in cultivated and weedy rice at different plant stages and the putative utility of this trait for weed management. Knowledge about flooding tolerance is derived primarily from crop models, mainly rice. The rice model informs us about the possible flooding tolerance mechanisms in weedy rice, Echinochloa species, and other weeds. During germination, the gene related to carbohydrate mobilization and energy intake (RAmy3D), and genes involved in metabolism maintenance under anoxia (ADH, PDC, and OsB12D1) are the most important for flooding tolerance. Flooding tolerance during emergence involved responses promoted by ethylene and induction of RAmy3D, ADH, PDC, and OsB12D1. Plant species tolerant to complete submersion also employ escape strategies or the ability to become quiescent during the submergence period. In weedy rice, the expression of PDC1, SUS3, and SUB1 genes is not directly related to flooding tolerance, contrary to what was learned in cultivated rice. Mitigation of flooding tolerance in weeds could be achieved with biotechnological approaches and genetic manipulation of flood tolerance genes through RNAi and transposons, providing a potential new tool for weed management.

Relationships between Leaf Anatomy and Physiological Functioning of Southern US Oak Species Differing in Flood Tolerance

Research Highlights: Bottomland oaks receive less attention than upland species, however their adaptations to flooding and summer water stress will extend our understanding of the oak genus and links between physiology and leaf anatomy. Background and objectives: Determining links between leaf anatomy and physiology can aid in parameterizing dynamic global vegetation models for oak systems, therefore we sought to (1) compare leaf anatomic, nutrient, and physiological parameters for bottomland oaks differing in flood tolerance, (2) determine correlations across parameters and determine which anatomic and nutrient parameters best predict photosynthetic capacity metrics, and (3) compare these data with reported literature values for oaks across the globe. Materials and Methods: We measured CO2 response curves (A/Ci) on leaves from Nuttall, Shumard, swamp chestnut, water and white oak seedlings planted in the Southeastern United States (US) and estimated stomatal size and density, epidermal cell size, vein density, leaf mass per area (LMA) and nitrogen (N) concentrations. Principal component analysis among these leaf anatomic and nutrient parameters was used to determine the best predictors of photosynthetic parameters including Rubisco-limited carboxylation rate (VCmax) and electron transport limited carboxylation rate (Jmax). Results: We found that although physiological parameters were similar, flood-tolerant oaks had lower leaf N concentrations and larger, more infrequent stomata than less flood-tolerant species. Leaf epidermal properties were correlated with N concentrations and a principal component capturing this correlation as well as principal components correlated with mesophyll conductance and leaf carbon concentrations were found to best explain variation in VCmax and Jmax. These Southeastern US oaks exhibited similar leaf physiological parameters and LMA as oaks reported in the literature but differed in leaf epidermal and stomatal properties as well as leaf N concentrations increasing the reported range of these parameters within the oak genus. Conclusions: Therefore, leaf anatomy and nutrient parameters as opposed to physiology differed across flood tolerance and between bottomland oaks and broader literature values.

Photosynthesis and Survival of Young Carpotroche brasiliensis Endl. (Achariaceae) Plants Subjected to Flooding

Carpotroche brasiliensis is a native tree of the Brazilian Atlantic Forest with potential economic value for cultivation in agroforestry systems. We conducted an experiment to determine the photosynthetic and survival responses of young C. brasiliensis plants to electrochemical changes in flooded soils as an indication of their flood tolerance and potential for cultivation in flood-prone areas. Soil flooding decreases the reduction–oxidation potential (redox) potential (Eh), pH, and electrical conductivity (Ec) of the soil, with subsequent recovery of the pH and Ec. Decreases in Eh negatively affect net photosynthesis (A). In flooded soil, decreased A was associated with decreased stomatal conductance (gs) and after 21 days was also associated with decreases in the instantaneous carboxylation efficiency (A/Ci) and potential quantum yield of photosystem II (Fv/Fm). Although flooded C. brasiliensis seedlings developed morphological structures known to increase flood tolerance, this was not enough to prevent severe signs of flooding stress. After 21 days of flooding, flooded plants were unflooded, and 17 days after plants were removed from flood, 90 percent of the unflooded plants died. Our results demonstrate that young plants of C. brasiliensis are suitable for planting in agroforestry systems only in areas with well-drained soils.