DNA-Based Diagnostics for Genetically Modified Cotton: Decaplex PCR Assay to Differentiate MON531 and MON15985 Bt Cotton Events

Author(s):  
Gurinder Jit Randhawa ◽  
Monika Singh ◽  
Rashmi Chhabra
2014 ◽  
Vol 97 (5) ◽  
pp. 1299-1309 ◽  
Author(s):  
Rashmi Chhabra ◽  
Gurinder Jit Randhawa ◽  
Rajesh K Bhoge ◽  
Monika Singh

Abstract Qualitative diagnostics for all five commercialized genetically modified (GM) cotton events for insect resistance in India is being reported for the first time in this paper. The cost-effective and robust multiplex PCR (MPCR)-based detection assay, distinguishing the insect resistant transgenic Bt cotton events, viz., MON531, MON15985, Event 1, GFM-cry1A, and MLS-9124, has been developed. This decaplex PCR assay targets nine transgenic elements, viz., sequences of four transgenes, three transgene constructs, and two event-specific sequences along with one endogenous reference gene. The LOD of the qualitative MPCR assay was up to 0.1%. A quantitative detection method for four widely commercially cultivated GM cotton events, namely, MON531, MON15985, Event 1, and GFM-cry1A, covering 99.5% of the total area under GM cultivation in the country, is also reported. A construct-specific real-time PCR assay has been developed for quantification of these GM cotton events with LOQ <0.05% and LOD <0.025%. The developed assays will be of great use to screen for the presence/absence of authorized GM cotton events in unknown samples and to check the authenticity of GM cotton seed samples.


Author(s):  
N. R. Valadares ◽  
M. A. Soares ◽  
E. A. Ferreira ◽  
V. G. Mendes-Sá ◽  
A. M. Azevedo ◽  
...  

Abstract Genetically modified plants are one of the tactics used in integrated pest management - IPM. There is great concern about the impact of these plants on non-target organisms. On the other hand, there is little information in the literature on the effects of transgenics (Bacillus thuringiensis) Bt on populations of phytophagous mites, and the physiological responses that this attack promotes on plants. The objective of this work was to evaluate the biology of the T. ludeni mite in Bt cotton, expressing the Cry1F and Cry1Ac proteins. To evaluate the behavior of food and oviposition preference of the T. ludeni with Bt cotton and isohybrid. Verify if the physiological stress caused by T. ludeni’s attack is differentiated in Bt cotton. The mites were reared in Bt cotton and isohybrid, in a total of 40 replicates in the completely randomized design and the biological cycle was evaluated. The food preference and oviposition analysis were done with 10 replicates, with choice. The physiological stress was evaluated through chlorophyll fluorescence, under greenhouse conditions. The data of the T. ludeni biology were analyzed by Student's t-test, for food and oviposition preference the chi-square test was performed. Regression models were fitted for the fluorescence parameters. The model identity test was used to evaluate the differences between Bt and isohybrid treatments. Cry1F and Cry1Ac proteins have not affected the biology of T. ludeni. The photosynthetic parameters in Bt cotton plants were less influenced by T. ludeni infestation.


2012 ◽  
Vol 21 (6) ◽  
pp. 387-394 ◽  
Author(s):  
Camille Renaudin ◽  
Hugo Pelc ◽  
Julien Opois

2016 ◽  
Vol 41 (4) ◽  
pp. 963-970
Author(s):  
Sandra J. Valencia-Cataño ◽  
Jairo Rodríguez-Chalarca ◽  
Carlos A. Blanco

2021 ◽  
Vol 46 (2) ◽  
Author(s):  
Miriam Sánchez-Vega ◽  
Luis Alberto Aguirre-Uribe ◽  
Mariano Flores-Dávila ◽  
Ernesto Cerna-Chávez ◽  
Yisa María Ochoa-Fuentes ◽  
...  

2019 ◽  
Vol 104 (1) ◽  
pp. 343-351
Author(s):  
Ahmad Ali Shahid ◽  
Ibrahim Bala Salisu ◽  
Amina Yaqoob ◽  
Abdul Qayyum Rao ◽  
Inayat Ullah ◽  
...  

2019 ◽  
Vol 62 (1) ◽  
Author(s):  
Soon-Jae Eum ◽  
Il Ryong Kim ◽  
Hye Song Lim ◽  
Jung Ro Lee ◽  
Wonkyun Choi

Abstract Multiplex polymerase chain reaction (PCR) methods have been developed and validated for screening, tracing, and regulating genetically modified (GM) crops in quarantine and environmental monitoring. In this study, we aimed to develop a method to simultaneously detect four GM cotton varieties in order to establish a screening system for cotton volunteers. Based on the sequence of DNA in the junction between introduced gene and flanking genomic DNA of four GM cotton events, herbicide-tolerant MON88701 and DAS-81910-7 and insect-resistant COT102 and T304-40, event-specific primers were designed and a multiplex detection method was developed. The simplex PCR results supported the multiplex PCR results; the amplification efficiency of the novel multiplex PCR method was increased compared with that of the Joint Research Centre (JRC) method. Based on the accuracy and efficiency, the method can be applied to detect and identify randomly mixed reference materials and suspected cotton volunteers. To apply this multiplex PCR method to living modified (LM) environmental monitoring samples, we performed additional PCR analysis to identify whether the volunteers were the four LM cotton varieties. As a result, 66 cotton volunteers were identified with stack event, comprising one or two of the four LM cotton events, and all stacks have been approved in South Korea for food, feed, and processing. These results indicated that our novel multiplex method is suitable for LMO identification.


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