A Methodology for Designing Agent-Based Models: Agent from « UP » for Complex Systems

Author(s):  
Ahmed Tidjane Cisse ◽  
Aboubacar Cisse ◽  
Alassane Bah ◽  
Jacques A. Ndjone ◽  
Cheikh M. F. Kebe
2019 ◽  
Vol 28 (3) ◽  
pp. 299-305 ◽  
Author(s):  
Jens Koed Madsen ◽  
Richard Bailey ◽  
Ernesto Carrella ◽  
Philipp Koralus

Computational cognitive models typically focus on individual behavior in isolation. Models frequently employ closed-form solutions in which a state of the system can be computed if all parameters and functions are known. However, closed-form models are challenged when used to predict behaviors for dynamic, adaptive, and heterogeneous agents. Such systems are complex and typically cannot be predicted or explained by analytical solutions without application of significant simplifications. In addressing this problem, cognitive and social psychological sciences may profitably use agent-based models, which are widely employed to simulate complex systems. We show that these models can be used to explore how cognitive models scale in social networks to calibrate model parameters, to validate model predictions, and to engender model development. Agent-based models allow for controlled experiments of complex systems and can explore how changes in low-level parameters impact the behavior at a whole-system level. They can test predictions of cognitive models and may function as a bridge between individually and socially oriented models.


2021 ◽  
Vol 13 (16) ◽  
pp. 9292
Author(s):  
Carmen Ruiz-Puente

The adoption of Industrial Symbiosis (IS) practices within urban areas is gaining interest due to the environmental impacts entailed by the development of cities. However, there is still a lack of knowledge about how the relationships between industrial and urban areas can be modelled. In this context, this research aimed at posing a conceptual model to understand and represent Urban-Industrial Systems (UIS). To this end, a set of worldwide previous UIS experiences were overviewed to identify the agents, dynamics, and collaboration opportunities that characterize them. The multi-perspective analysis of these cases indicated that UIS are complex systems, which means that they are autonomous, self-organized, responsive, nonlinear, and willing to consolidate their resilience. As such, Agent-Based Models (ABM) were suggested to be the most suitable approach for their representation.


2017 ◽  
Author(s):  
Matjaž Perc

The fact that relatively simple entities, such as particles or neurons, or even ants or bees or humans, give rise to fascinatingly complex behavior when interacting in large numbers is the hallmark of complex systems science. Agent-based models are frequently employed for modeling and obtaining a predictive understanding of complex systems. Since the sheer number of equations that describe the behavior of an entire agent-based model often makes it impossible to solve such models exactly, Monte Carlo simulation methods must be used for the analysis. However, unlike pairwise interactions among particles that typically govern solid-state physics systems, interactions among agents that describe systems in biology, sociology or the humanities often involve group interactions, and they also involve a larger number of possible states even for the most simplified description of reality. This begets the question: When can we be certain that an observed simulation outcome of an agent-based model is actually stable and valid in the large system-size limit? The latter is key for the correct determination of phase transitions between different stable solutions, and for the understanding of the underlying microscopic processes that led to these phase transitions. We show that a satisfactory answer can only be obtained by means of a complete stability analysis of subsystem solutions. A subsystem solution can be formed by any subset of all possible agent states. The winner between two subsystem solutions can be determined by the average moving direction of the invasion front that separates them, yet it is crucial that the competing subsystem solutions are characterized by a proper composition and spatiotemporal structure before the competition starts. We use the spatial public goods game with diverse tolerance as an example, but the approach has relevance for a wide variety of agent-based models.


2021 ◽  
Vol 9 (2) ◽  
pp. 417
Author(s):  
Sherli Koshy-Chenthittayil ◽  
Linda Archambault ◽  
Dhananjai Senthilkumar ◽  
Reinhard Laubenbacher ◽  
Pedro Mendes ◽  
...  

The human microbiome has been a focus of intense study in recent years. Most of the living organisms comprising the microbiome exist in the form of biofilms on mucosal surfaces lining our digestive, respiratory, and genito-urinary tracts. While health-associated microbiota contribute to digestion, provide essential nutrients, and protect us from pathogens, disturbances due to illness or medical interventions contribute to infections, some that can be fatal. Myriad biological processes influence the make-up of the microbiota, for example: growth, division, death, and production of extracellular polymers (EPS), and metabolites. Inter-species interactions include competition, inhibition, and symbiosis. Computational models are becoming widely used to better understand these interactions. Agent-based modeling is a particularly useful computational approach to implement the various complex interactions in microbial communities when appropriately combined with an experimental approach. In these models, each cell is represented as an autonomous agent with its own set of rules, with different rules for each species. In this review, we will discuss innovations in agent-based modeling of biofilms and the microbiota in the past five years from the biological and mathematical perspectives and discuss how agent-based models can be further utilized to enhance our comprehension of the complex world of polymicrobial biofilms and the microbiome.


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