Phylogenetic analysis of rabies virus isolated from canids in North and Northeast Brazil

2016 ◽  
Vol 162 (1) ◽  
pp. 71-77 ◽  
Author(s):  
Débora Nunes de Souza ◽  
Pedro Carnieli ◽  
Carla Isabel Macedo ◽  
Rafael de Novaes Oliveira ◽  
Helena Beatriz de Carvalho Ruthner Batista ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Rabies Virus ◽  
Northeast Brazil

Increased detection of rabies virus in bats in Ceará State (Northeast Brazil) after implementation of a passive surveillance programme

2019 ◽  
Vol 67 (2) ◽  
pp. 186-192 ◽  
Author(s):  
Naylê Francelino Holanda Duarte ◽  
Carlos Henrique Alencar ◽  
Kellyn Kessiene de Sousa Cavalcante ◽  
Francisco Gustavo Silveira Correia ◽  
Phyllis Catharina Romijn ◽  
...  
Keyword(s):  
Rabies Virus ◽  
Northeast Brazil ◽  
Passive Surveillance ◽  
Surveillance Programme

Whole Genome Sequencing and Phylogenetic Analysis of the Rabies Virus Strain Moscow 3253 Adapted to a Vero Cell Line

2020 ◽  
Vol 35 (4) ◽  
pp. 237-242
Author(s):  
Ya. M. Krasnov ◽  
Zh. V. Alkhova ◽  
S. V. Generalov ◽  
I. V. Tuchkov ◽  
E. A. Naryshkina ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Vero Cell ◽  
Whole Genome Sequencing ◽  
Cell Line ◽  
Rabies Virus ◽  
Genome Sequencing ◽  
Virus Strain ◽  
Whole Genome ◽  
Vero Cell Line ◽  
Rabies Virus Strain

scholarly journals Phylogenetic analysis of glycoprotein (G) gene of rabies virus isolated from spotted deer, Delhi, 2016

2018 ◽  
Vol 73 ◽  
pp. 385
Author(s):  
G. Singh ◽  
R. Jaiswal ◽  
M. Chhabra ◽  
N.K. Gupta ◽  
M. Singhai ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Rabies Virus ◽  
Glycoprotein G ◽  
Spotted Deer

scholarly journals Nucleotide Sequence and Phylogenetic Analysis of Glycoprotein-G of the Russian Fixed Rabies Virus Strain “Moscow 3253”

2013 ◽  
pp. 73-75 ◽  
Author(s):  
I. V. Tuchkov ◽  
Ya. M. Krasnov ◽  
A. A. Goryaev ◽  
Zh. V. Matveeva ◽  
A. V. Stepanov ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Nucleotide Sequence ◽  
Rabies Virus ◽  
Virus Strain ◽  
Glycoprotein G ◽  
Rabies Virus Strain

scholarly journals MOLECULAR-GENETIC CHARACTERIZATION OF FIELD ISOLATES OF RABIES VIRUS IDENTIFIED IN THE TERRITORY OF VLADIMIR, MOSCOW, TVER, NIZHNY NOVGOROD AND RYAZAN REGIONS

2017 ◽  
Vol 62 (3) ◽  
pp. 101-108
Author(s):  
O. N. Zaykova ◽  
T. V. Grebennikova ◽  
A. M. Gulyukin ◽  
A. A. Shabeykin ◽  
I. V. Polyakova ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Rabies Virus ◽  
Molecular Genetic ◽  
Phylogenetic Group ◽  
Molecular Genetic Study ◽  
Field Isolates ◽  
Vladimir Region ◽  
Pcr Products ◽  
Molecular Genetic Characterization

The article presents a molecular genetic study of genomes of field isolates of rabies virus isolated in the Vladimir, Moscow, Tver, Nizhny Novgorod and Ryazan regions, with the aim of carrying out phylogenetic analysis. We studied 20 samples of purified PCR products containing the rabies virus nucleoprotein. The samples were provided by the Vladimir veterinary service. Sequencing and phylogenetic analysis of the gene showed that 12 fragments of isolates under study were close to the Central phylogenetic group of the rabies virus; namely - 5 isolates from the Vladimir region, 2 from the Nizhny Novgorod region, 2 from the Moscow region, and 3 from the Tver region. Eight studied isolates from the Nizhny Novgorod and Ryazan regions were attributed to the Eurasian phylogenetic group.

scholarly journals Phylogenetic analysis of near full-length sequences of the Desmodus rotundus genetic lineage of rabies virus

2020 ◽  
Vol 80 ◽  
pp. 104179
Author(s):  
Angélica Cristine de Almeida Campos ◽  
Camila Malta Romano ◽  
Fernando Lucas Melo ◽  
Danielle Bastos Araújo ◽  
Elenice Maria Sequetin Cunha ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Rabies Virus ◽  
Full Length ◽  
Genetic Lineage ◽  
Desmodus Rotundus

Typing of the rabies virus in Chile, 2002–2008

2012 ◽  
Vol 140 (12) ◽  
pp. 2157-2162 ◽  
Author(s):  
V. YUNG ◽  
M. FAVI ◽  
J. FERNANDEZ
Keyword(s):  
Phylogenetic Analysis ◽  
Monoclonal Antibodies ◽  
Rabies Virus ◽  
Tadarida Brasiliensis ◽  
Insectivorous Bats ◽  
Nucleoprotein Gene ◽  
Nucleoprotein N

SUMMARYIn Chile, dog rabies has been controlled and insectivorous bats have been identified as the main rabies reservoir. This study aimed to determine the rabies virus (RABV) variants circulating in the country between 2002 and 2008. A total of 612 RABV isolates were tested using a panel with eight monoclonal antibodies against the viral nucleoprotein (N-mAbs) for antigenic typing, and a product of 320-bp of the nucleoprotein gene was sequenced from 99 isolates. Typing of the isolates revealed six different antigenic variants but phylogenetic analysis identified four clusters associated with four different bat species. Tadarida brasiliensis bats were confirmed as the main reservoir. This methodology identified several independent rabies enzootics maintained by different species of insectivorous bats in Chile.

Phylogenetic analysis of partial RNA-polymerase blocks II and III of Rabies virus isolated from the main rabies reservoirs in Brazil

Virus Genes ◽  
2012 ◽  
Vol 45 (1) ◽  
pp. 76-83 ◽  
Author(s):  
Pedro Carnieli ◽  
Rafael de Novaes Oliveira ◽  
Willian de Oliveira Fahl ◽  
Helena Beatriz de Carvalho Ruthner Batista ◽  
Karin Corrêa Scheffer ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Rna Polymerase ◽  
Rabies Virus

scholarly journals Sequencing and sequence analysis of partial nucleoprotein (N) gene and phylogenetic analysis of rabies virus field isolates from Gujarat state, India

VirusDisease ◽  
2017 ◽  
Vol 28 (3) ◽  
pp. 320-327
Author(s):  
Dhaval H. Vagheshwari ◽  
Bharat B. Bhanderi ◽  
Rafyuddin A. Mathakiya ◽  
Mayurdhvaj K. Jhala
Keyword(s):  
Phylogenetic Analysis ◽  
Sequence Analysis ◽  
Rabies Virus ◽  
N Gene ◽  
Gujarat State ◽  
Field Isolates ◽  
Nucleoprotein N

scholarly journals Comparative molecular and genetic characterization of rabies viruses (Rabies lyssavirus, Lyssavirus, Rhabdoviridae) circulated in the Russian Federation in 1985–2016

2020 ◽  
Vol 65 (1) ◽  
pp. 41-48
Author(s):  
O. N. Zaykova ◽  
T. V. Grebennikova ◽  
M. A. Losich ◽  
A. L. Elakov ◽  
A. M. Gulyukin ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Molecular Epidemiology ◽  
Rabies Virus ◽  
Russian Federation ◽  
Amino Acid Sequences ◽  
Phylogenetic Study ◽  
Human Populations ◽  
Human Beings ◽  
The Russian Federation ◽  
Virus Isolates

Introduction. Rabies caused by the neurotropic virus of the genus Lyssavirus, Rhabdoviridae family, which infects all warm-blooded vertebrates including human beings. The homology level of the amino acid sequences for Lyssaviruses nucleoprotein reaches 78–93%.Aim – study the genetic diversity and molecular epidemiology of Lyssaviruses circulated in the Russian Federation in 1985–2016.Material and methods. 54 isolates of rabies virus isolated from animals, and 2 isolates from humans, 4 vaccine strains of rabies virus: RV-97, ERA, Shchelkovo 51, ERAG333 used in phylogenetic study. Phylogenetic analysis was performed using Genbank data on genome fragments of 73 rabies virus isolates and 9 EBLV-1 isolates. DNASTAR V.3.12, Bio Edit 7.0.4.1 and MEGA v.10.0.5, Primer Premier 5 programs have been used.Results. Comparative molecular genetic analysis of genomes fragments of 130 Lissaviruses, isolated on the territory of the RF, Ukraine in 1985-2016, vaccine strains of rabies virus, showed their distribution by geographical feature. Comparison of the nucleoprotein fragments of the rabies virus isolates with vaccine strains revealed 4 marker mutations: V56I (Eurasian group), L/V95W (Central group), D101N/S/T, and N/G106D. Phylogenetic analysis of the isolate «Juli», isolated from a human bitten by a bat proved his belonging to the European Bat lyssavirus-1a.Discussion. Study of the molecular epidemiology of rabies within the Russian Federation allows for the genotyping of the viruses and helps to study the hidden mechanisms of rabies infection in animal and human populations, and to characterize vaccine strains, including during oral vaccination.Conclusion. Further study of the molecular epidemiology of rabies within the Russian Federation and the countries bordering it is important.

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