There are more small amino acids and fewer aromatic rings in proteins of ionizing radiation-resistant bacteria

2013 ◽  
Vol 63 (4) ◽  
pp. 1483-1491 ◽  
Author(s):  
Haïtham Sghaier ◽  
Steinar Thorvaldsen ◽  
Nadia Malek Saied
2013 ◽  
Vol 55 (1) ◽  
pp. 135-140 ◽  
Author(s):  
Li Zhi-Han Yu ◽  
Xue-Song Luo ◽  
Ming Liu ◽  
Qiaoyun Huang

2005 ◽  
Vol 71 (9) ◽  
pp. 5225-5235 ◽  
Author(s):  
Fred A. Rainey ◽  
Keren Ray ◽  
Margarida Ferreira ◽  
Bridget Z. Gatz ◽  
M. Fernanda Nobre ◽  
...  

ABSTRACT The ionizing-radiation-resistant fractions of two soil bacterial communities were investigated by exposing an arid soil from the Sonoran Desert and a nonarid soil from a Louisiana forest to various doses of ionizing radiation using a 60Co source. The numbers of surviving bacteria decreased as the dose of gamma radiation to which the soils were exposed increased. Bacterial isolates surviving doses of 30 kGy were recovered from the Sonoran Desert soil, while no isolates were recovered from the nonarid forest soil after exposure to doses greater than 13 kGy. The phylogenetic diversities of the surviving culturable bacteria were compared for the two soils using 16S rRNA gene sequence analysis. In addition to a bacterial population that was more resistant to higher doses of ionizing radiation, the diversity of the isolates was greater in the arid soil. The taxonomic diversity of the isolates recovered was found to decrease as the level of ionizing-radiation exposure increased. Bacterial isolates of the genera Deinococcus, Geodermatophilus, and Hymenobacter were still recovered from the arid soil after exposure to doses of 17 to 30 kGy. The recovery of large numbers of extremely ionizing-radiation-resistant bacteria from an arid soil and not from a nonarid soil provides further ecological support for the hypothesis that the ionizing-radiation resistance phenotype is a consequence of the evolution of other DNA repair systems that protect cells against commonly encountered environmental stressors, such as desiccation. The diverse group of bacterial strains isolated from the arid soil sample included 60 Deinococcus strains, the characterization of which revealed nine novel species of this genus.


BMC Genomics ◽  
2008 ◽  
Vol 9 (1) ◽  
pp. 297 ◽  
Author(s):  
Haïtham Sghaier ◽  
Kaïs Ghedira ◽  
Alia Benkahla ◽  
Insaf Barkallah

Author(s):  
Yuna Park ◽  
Soohyun Maeng ◽  
Tuvshinzaya Damdintogtokh ◽  
Jing Zhang ◽  
Min-Kyu Kim ◽  
...  

2021 ◽  
Vol 26 (3) ◽  
pp. 501-501
Author(s):  
Jun-Ho Kim ◽  
Nam-Hong Kim ◽  
Eun-Ji Kim ◽  
Ji Ho Kim ◽  
Min-Young Lee ◽  
...  

Molecules ◽  
2019 ◽  
Vol 24 (3) ◽  
pp. 438 ◽  
Author(s):  
Aneta Kaczor ◽  
Karolina Witek ◽  
Sabina Podlewska ◽  
Joanna Czekajewska ◽  
Annamaria Lubelska ◽  
...  

Searching for new chemosensitizers of bacterial multidrug resistance (MDR), chemical modifications of (Z)-5-(4-chlorobenzylidene)-2-(4-methylpiperazin-1-yl)-3H-imidazol-4(5H)-one (6) were performed. New compounds (7–17), with fused aromatic rings at position 5, were designed and synthesized. Crystallographic X-ray analysis proved that the final compounds (7–17) were substituted with tertiary amine-propyl moiety at position 3 and primary amine group at 2 due to intramolecular Dimroth rearrangement. New compounds were evaluated on their antibiotic adjuvant properties in either Gram-positive or Gram-negative bacteria. Efflux pump inhibitor (EPI) properties towards the AcrAB-TolC pump in Enterobacter aerogenes (EA289) were investigated in the real-time efflux (RTE) assay. Docking and molecular dynamics were applied to estimate an interaction of compounds 6–17 with penicillin binding protein (PBP2a). In vitro ADME-Tox properties were evaluated for compound 9. Most of the tested compounds reduced significantly (4-32-fold) oxacillin MIC in highly resistant MRSA HEMSA 5 strain. The anthracene-morpholine derivative (16) was the most potent (32-fold reduction). The tested compounds displayed significant EPI properties during RTE assay (37–97%). The naphthyl-methylpiperazine derivative 9 showed the most potent “dual action” of both oxacillin adjuvant (MRSA) and EPI (E. aerogenes). Molecular modeling results suggested the allosteric mechanism of action of the imidazolones, which improved binding of oxacillin in the PBP2a active site in MRSA.


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