scholarly journals Graph convolutional and attention models for entity classification in multilayer networks

2021 ◽  
Vol 6 (1) ◽  
Author(s):  
Lorenzo Zangari ◽  
Roberto Interdonato ◽  
Antonio Calió ◽  
Andrea Tagarelli

AbstractGraph Neural Networks (GNNs) are powerful tools that are nowadays reaching state of the art performances in a plethora of different tasks such as node classification, link prediction and graph classification. A challenging aspect in this context is to redefine basic deep learning operations, such as convolution, on graph-like structures, where nodes generally have unordered neighborhoods of varying size. State-of-the-art GNN approaches such as Graph Convolutional Networks (GCNs) and Graph Attention Networks (GATs) work on monoplex networks only, i.e., on networks modeling a single type of relation among an homogeneous set of nodes. The aim of this work is to generalize such approaches by proposing a GNN framework for representation learning and semi-supervised classification in multilayer networks with attributed entities, and arbitrary number of layers and intra-layer and inter-layer connections between nodes. We instantiate our framework with two new formulations of GAT and GCN models, namely and , specifically devised for general, attributed multilayer networks. The proposed approaches are evaluated on an entity classification task on nine widely used real-world network datasets coming from different domains and with different structural characteristics. Results show that both our proposed and methods provide effective and efficient solutions to the problem of entity classification in multilayer attributed networks, being faster to learn and offering better accuracy than the competitors. Furthermore, results show how our methods are able to take advantage of the presence of real attributes for the entities, in addition to arbitrary inter-layer connections between the nodes in the various layers.

Author(s):  
George Dasoulas ◽  
Ludovic Dos Santos ◽  
Kevin Scaman ◽  
Aladin Virmaux

In this paper, we show that a simple coloring scheme can improve, both theoretically and empirically, the expressive power of Message Passing Neural Networks (MPNNs). More specifically, we introduce a graph neural network called Colored Local Iterative Procedure (CLIP) that uses colors to disambiguate identical node attributes, and show that this representation is a universal approximator of continuous functions on graphs with node attributes. Our method relies on separability, a key topological characteristic that allows to extend well-chosen neural networks into universal representations. Finally, we show experimentally that CLIP is capable of capturing structural characteristics that traditional MPNNs fail to distinguish, while being state-of-the-art on benchmark graph classification datasets.


2020 ◽  
Vol 34 (04) ◽  
pp. 7007-7014
Author(s):  
Shichao Zhu ◽  
Lewei Zhou ◽  
Shirui Pan ◽  
Chuan Zhou ◽  
Guiying Yan ◽  
...  

Graph Neural Networks (GNNs) have achieved state-of-the-art performance in many graph data analysis tasks. However, they still suffer from two limitations for graph representation learning. First, they exploit non-smoothing node features which may result in suboptimal embedding and degenerated performance for graph classification. Second, they only exploit neighbor information but ignore global topological knowledge. Aiming to overcome these limitations simultaneously, in this paper, we propose a novel, flexible, and end-to-end framework, Graph Smoothing Splines Neural Networks (GSSNN), for graph classification. By exploiting the smoothing splines, which are widely used to learn smoothing fitting function in regression, we develop an effective feature smoothing and enhancement module Scaled Smoothing Splines (S3) to learn graph embedding. To integrate global topological information, we design a novel scoring module, which exploits closeness, degree, as well as self-attention values, to select important node features as knots for smoothing splines. These knots can be potentially used for interpreting classification results. In extensive experiments on biological and social datasets, we demonstrate that our model achieves state-of-the-arts and GSSNN is superior in learning more robust graph representations. Furthermore, we show that S3 module is easily plugged into existing GNNs to improve their performance.


Sensors ◽  
2021 ◽  
Vol 21 (14) ◽  
pp. 4666
Author(s):  
Zhiqiang Pan ◽  
Honghui Chen

Collaborative filtering (CF) aims to make recommendations for users by detecting user’s preference from the historical user–item interactions. Existing graph neural networks (GNN) based methods achieve satisfactory performance by exploiting the high-order connectivity between users and items, however they suffer from the poor training efficiency problem and easily introduce bias for information propagation. Moreover, the widely applied Bayesian personalized ranking (BPR) loss is insufficient to provide supervision signals for training due to the extremely sparse observed interactions. To deal with the above issues, we propose the Efficient Graph Collaborative Filtering (EGCF) method. Specifically, EGCF adopts merely one-layer graph convolution to model the collaborative signal for users and items from the first-order neighbors in the user–item interactions. Moreover, we introduce contrastive learning to enhance the representation learning of users and items by deriving the self-supervisions, which is jointly trained with the supervised learning. Extensive experiments are conducted on two benchmark datasets, i.e., Yelp2018 and Amazon-book, and the experimental results demonstrate that EGCF can achieve the state-of-the-art performance in terms of Recall and normalized discounted cumulative gain (NDCG), especially on ranking the target items at right positions. In addition, EGCF shows obvious advantages in the training efficiency compared with the competitive baselines, making it practicable for potential applications.


Author(s):  
Zhichao Huang ◽  
Xutao Li ◽  
Yunming Ye ◽  
Michael K. Ng

Graph Convolutional Networks (GCNs) have been extensively studied in recent years. Most of existing GCN approaches are designed for the homogenous graphs with a single type of relation. However, heterogeneous graphs of multiple types of relations are also ubiquitous and there is a lack of methodologies to tackle such graphs. Some previous studies address the issue by performing conventional GCN on each single relation and then blending their results. However, as the convolutional kernels neglect the correlations across relations, the strategy is sub-optimal. In this paper, we propose the Multi-Relational Graph Convolutional Network (MR-GCN) framework by developing a novel convolution operator on multi-relational graphs. In particular, our multi-dimension convolution operator extends the graph spectral analysis into the eigen-decomposition of a Laplacian tensor. And the eigen-decomposition is formulated with a generalized tensor product, which can correspond to any unitary transform instead of limited merely to Fourier transform. We conduct comprehensive experiments on four real-world multi-relational graphs to solve the semi-supervised node classification task, and the results show the superiority of MR-GCN against the state-of-the-art competitors.


Author(s):  
Jiafeng Cheng ◽  
Qianqian Wang ◽  
Zhiqiang Tao ◽  
Deyan Xie ◽  
Quanxue Gao

Graph neural networks (GNNs) have made considerable achievements in processing graph-structured data. However, existing methods can not allocate learnable weights to different nodes in the neighborhood and lack of robustness on account of neglecting both node attributes and graph reconstruction. Moreover, most of multi-view GNNs mainly focus on the case of multiple graphs, while designing GNNs for solving graph-structured data of multi-view attributes is still under-explored. In this paper, we propose a novel Multi-View Attribute Graph Convolution Networks (MAGCN) model for the clustering task. MAGCN is designed with two-pathway encoders that map graph embedding features and learn the view-consistency information. Specifically, the first pathway develops multi-view attribute graph attention networks to reduce the noise/redundancy and learn the graph embedding features for each multi-view graph data. The second pathway develops consistent embedding encoders to capture the geometric relationship and probability distribution consistency among different views, which adaptively finds a consistent clustering embedding space for multi-view attributes. Experiments on three benchmark graph datasets show the superiority of our method compared with several state-of-the-art algorithms.


Author(s):  
Liang Zhang ◽  
Jingqun Li ◽  
Bin Zhou ◽  
Yan Jia

Identifying fake news on the media has been an important issue. This is especially true considering the wide spread of rumors on the popular social networks such as Twitter. Various kinds of techniques have been proposed to detect rumors. In this work, we study the application of graph neural networks for the task of rumor detection, and present a simplified new architecture to classify rumors. Numerical experiments show that the proposed simple network has comparable to or even better performance than state-of-the art graph convolutional networks, while having significantly reduced the computational complexity.


Author(s):  
Pengyong Li ◽  
Jun Wang ◽  
Ziliang Li ◽  
Yixuan Qiao ◽  
Xianggen Liu ◽  
...  

Self-supervised learning has gradually emerged as a powerful technique for graph representation learning. However, transferable, generalizable, and robust representation learning on graph data still remains a challenge for pre-training graph neural networks. In this paper, we propose a simple and effective self-supervised pre-training strategy, named Pairwise Half-graph Discrimination (PHD), that explicitly pre-trains a graph neural network at graph-level. PHD is designed as a simple binary classification task to discriminate whether two half-graphs come from the same source. Experiments demonstrate that the PHD is an effective pre-training strategy that offers comparable or superior performance on 13 graph classification tasks compared with state-of-the-art strategies, and achieves notable improvements when combined with node-level strategies. Moreover, the visualization of learned representation revealed that PHD strategy indeed empowers the model to learn graph-level knowledge like the molecular scaffold. These results have established PHD as a powerful and effective self-supervised learning strategy in graph-level representation learning.


Author(s):  
Jing Huang ◽  
Jie Yang

Hypergraph, an expressive structure with flexibility to model the higher-order correlations among entities, has recently attracted increasing attention from various research domains. Despite the success of Graph Neural Networks (GNNs) for graph representation learning, how to adapt the powerful GNN-variants directly into hypergraphs remains a challenging problem. In this paper, we propose UniGNN, a unified framework for interpreting the message passing process in graph and hypergraph neural networks, which can generalize general GNN models into hypergraphs. In this framework, meticulously-designed architectures aiming to deepen GNNs can also be incorporated into hypergraphs with the least effort. Extensive experiments have been conducted to demonstrate the effectiveness of UniGNN on multiple real-world datasets, which outperform the state-of-the-art approaches with a large margin. Especially for the DBLP dataset, we increase the accuracy from 77.4% to 88.8% in the semi-supervised hypernode classification task. We further prove that the proposed message-passing based UniGNN models are at most as powerful as the 1-dimensional Generalized Weisfeiler-Leman (1-GWL) algorithm in terms of distinguishing non-isomorphic hypergraphs. Our code is available at https://github.com/OneForward/UniGNN.


Author(s):  
Min Shi ◽  
Yufei Tang ◽  
Xingquan Zhu ◽  
David Wilson ◽  
Jianxun Liu

Networked data often demonstrate the Pareto principle (i.e., 80/20 rule) with skewed class distributions, where most vertices belong to a few majority classes and minority classes only contain a handful of instances. When presented with imbalanced class distributions, existing graph embedding learning tends to bias to nodes from majority classes, leaving nodes from minority classes under-trained. In this paper, we propose Dual-Regularized Graph Convolutional Networks (DR-GCN) to handle multi-class imbalanced graphs, where two types of regularization are imposed to tackle class imbalanced representation learning. To ensure that all classes are equally represented, we propose a class-conditioned adversarial training process to facilitate the separation of labeled nodes. Meanwhile, to maintain training equilibrium (i.e., retaining quality of fit across all classes), we force unlabeled nodes to follow a similar latent distribution to the labeled nodes by minimizing their difference in the embedding space. Experiments on real-world imbalanced graphs demonstrate that DR-GCN outperforms the state-of-the-art methods in node classification, graph clustering, and visualization.


2020 ◽  
Vol 34 (05) ◽  
pp. 7464-7471
Author(s):  
Deng Cai ◽  
Wai Lam

The dominant graph-to-sequence transduction models employ graph neural networks for graph representation learning, where the structural information is reflected by the receptive field of neurons. Unlike graph neural networks that restrict the information exchange between immediate neighborhood, we propose a new model, known as Graph Transformer, that uses explicit relation encoding and allows direct communication between two distant nodes. It provides a more efficient way for global graph structure modeling. Experiments on the applications of text generation from Abstract Meaning Representation (AMR) and syntax-based neural machine translation show the superiority of our proposed model. Specifically, our model achieves 27.4 BLEU on LDC2015E86 and 29.7 BLEU on LDC2017T10 for AMR-to-text generation, outperforming the state-of-the-art results by up to 2.2 points. On the syntax-based translation tasks, our model establishes new single-model state-of-the-art BLEU scores, 21.3 for English-to-German and 14.1 for English-to-Czech, improving over the existing best results, including ensembles, by over 1 BLEU.


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