scholarly journals Insights into information contained in multiplicative scatter correction parameters and the potential for estimating particle size from these parameters

2012 ◽  
Vol 746 ◽  
pp. 37-46 ◽  
Author(s):  
Yi-Chieh Chen ◽  
Suresh N. Thennadil
1994 ◽  
Vol 2 (1) ◽  
pp. 43-47 ◽  
Author(s):  
M.S. Dhanoa ◽  
S.J. Lister ◽  
R. Sanderson ◽  
R.J. Barnes

We demonstrate that set-dependent multiplicative scatter correction and set-independent standard normal variate transformations of NIR spectra are linearly related as theoretically expected. It is shown that the mean and standard deviation of the set-mean-spectrum together with the correlation coefficient between each individual spectrum and set-mean-spectrum are required to link these two transformations. It is through these three quantities, that set-dependency is incorporated into spectra derived by application of multiplicative scatter correction. MSC and SNV are two alternative approaches to reduce particle size effects and they are interconvertible.


2021 ◽  
Author(s):  
Friederike Kaestner ◽  
Magdalena Sut-Lohmann ◽  
Thomas Raab ◽  
Hannes Feilhauer ◽  
Sabine Chabrillat

<p>Across Europe there are 2.5 million potentially contaminated sites, approximately one third have already been identified and around 15% have been sanitized. Phytoremediation is a well-established technique to tackle this problem and to rehabilitate soil. However, remediation methods, such as biological treatments with microorganisms or phytoremediation with trees, are still relatively time consuming. A fast monitoring of changes in heavy metal content over time in contaminated soils with hyperspectral spectroscopy is one of the first key factors to improve and control existing bioremediation methods.</p><p>At former sewage farms near Ragow (Brandenburg, Germany), 110 soil samples with different contamination levels were taken at a depth between 15-20 cm. These samples were prepared for hyperspectral measurements using the HySpex system under laboratory conditions, combing a VNIR (400-1000 nm) and a SWIR (1000-2500 nm) line-scan detector. Different spectral pre-processing methods, including continuum removal, first and second derivatives, standard normal variate, normalisation and multiplicative scatter correction, with two established estimation models such as Partial Least Squares Regression (PLSR) and Random Forest Regression (RFR), were applied to predict the heavy metal concentration (Ba, Ni, Cr, Cu) of this specific Technosol. The coefficient of determination (R2) shows for Ba and Ni values between 0.50 (RMSE: 9%) and 0.61 (RMSE: 6%) for the PLSR and between 0.84 (RMSE: 0.03%) and 0.91 (RMSE: 0.02%) for the RFR model. The results for Cu and Cr show values between 0.57 (RMSE: 17.9%) and 0.69 (RMSE: 15%) for the PLSR and 0.86 (0.12%) and 0.93 (0.01%) for the RFR model. The pre-processing method, which improve the robustness and performance of both models best, is multiplicative scatter correction followed by the standard normal variate for the first and second derivatives. Random Forest in a first approach seems to deliver better modeling performances. Still, the pronounced differences between PLSR and RFR fits indicate a strong dependence of the results on the respective modelling technique. This effect is subject to further investigation and will be addressed in the upcoming analysis steps.</p>


1988 ◽  
Vol 42 (5) ◽  
pp. 722-728 ◽  
Author(s):  
J. L. Ilari ◽  
H. Martens ◽  
T. Isaksson

Diffuse near-infrared reflectance spectroscopy has traditionally been an analytical technique for determining chemical compositions in a sample. We will, in this paper, focus on light scattering effects and their ability to determine the mean particle sizes of powders. The reflectance data of NaCl, broken glass, and sorbitol powders are linearized and submitted to the Multiplicative Scatter Correction (MSC), and the ensuing parameters are used in subsequent multivariate calibrations. The results indicate that particle size can, to a large degree, be determined from NIR reflectance data for a given type of powder. Up to 99% of the partical size variance was explained by the regression.


1988 ◽  
Vol 42 (7) ◽  
pp. 1273-1284 ◽  
Author(s):  
Tomas Isaksson ◽  
Tormod Næs

Near-infrared (NIR) reflectance spectra of five different food products were measured. The spectra were transformed by multiplicative scatter correction (MSC). Principal component regression (PCR) was performed, on both scatter-corrected and uncorrected spectra. Calibration and prediction were performed for four food constituents: protein, fat, water, and carbohydrates. All regressions gave lower prediction errors (7–68% improvement) by the use of MSC spectra than by the use of uncorrected absorbance spectra. One of these data sets was studied in more detail to clarify the effects of the MSC, by using PCR score, residual, and leverage plots. The improvement by using nonlinear regression methods is indicated.


1993 ◽  
Vol 47 (6) ◽  
pp. 702-709 ◽  
Author(s):  
Tomas Isaksson ◽  
Bruce Kowalski

This paper presents a nonlinear scatter correction method, called piece-wise multiplicative scatter correction (PMSC), that is a further development of the multiplicative scatter correction (MSC) method. Near-infrared diffuse transmittance (NIT) data from meat and meat product samples were used to test the predictive performances of the PMSC and the MSC methods. With the use of PMSC, the prediction errors, expressed as the root mean square error of prediction (RMSEP), were improved by up to 36% for protein, up to 55% for fat, and up to 37% for water, in comparison to uncorrected data. The corresponding improvements by using PMSC compared to MSC were up to 22%, 24%, and 31% for protein, fat, and water, respectively.


2008 ◽  
Vol 62 (10) ◽  
pp. 1153-1159 ◽  
Author(s):  
Willem Windig ◽  
Jeremy Shaver ◽  
Rasmus Bro

Multiplicative scatter correction (MSC) is a widely used normalization technique. It aims to correct spectra in such a way that they are as close as possible to a reference spectrum, generally the mean of the data set, by changing the scale and the offset of the spectra. When there are other differences in the spectra than just a scale and an offset, the mean spectrum changes after MSC. As a result, another MSC, with the new mean spectrum as the reference, will result in an additional correction. This paper studies the effect of multiple applications of MSC.


2013 ◽  
Vol 2013 ◽  
pp. 1-9 ◽  
Author(s):  
Huazhou Chen ◽  
Qiqing Song ◽  
Guoqiang Tang ◽  
Quanxi Feng ◽  
Liang Lin

The combined optimization of Savitzky-Golay (SG) smoothing and multiplicative scatter correction (MSC) were discussed based on the partial least squares (PLS) models in Fourier transform near-infrared (FT-NIR) spectroscopy analysis. A total of 5 cases of separately (or combined) using SG smoothing and MSC were designed and compared for optimization. For every case, the SG smoothing parameters were optimized with the number of PLS latent variables (F), with an expanded number of smoothing points. Taking the FT-NIR analysis of soil organic matter (SOM) as an example, the joint optimization of SG smoothing and MSC was achieved based on PLS modeling. The results showed that the optimal pretreatment was successively using SG smoothing and MSC, in which the SG smoothing parameters were 4th degree of polynomial, 2nd-order derivative, and 67 smoothing points, the best corresponding F, RMSEP, and RP were 7, 0.3982 (%), and 0.8862, respectively. This result was far better than those without any pretreatment. The combined optimization of SG smoothing and MSC could obviously improve the modeling result for NIR analysis of SOM. In addition, a new method for the classification of calibration and prediction was proposed by normalization principle. The optimizations were done on this basis of this classification.


2021 ◽  
pp. 096703352110065
Author(s):  
Sylvain Treguier ◽  
Kevin Jacq ◽  
Christel Couderc ◽  
Hicham Ferhout ◽  
Helene Tormo ◽  
...  

Fast diagnostic tools such as near infrared spectroscopy have recently gained interest for bacterial identification. To avoid a process involving microbial pellet or suspension preparation from Petri dishes for NIR analysis, direct screening from agar in Petri dishes was explored. This two-step study proposes a new procedure for bacterial screening directly on agar plates with minimal nutrient medium bias. Firstly, principal component analyses showed optimal discrimination between the genera Lactobacillus, Pseudomonas and Brochothrix on different culture media, in transmission mode and with the bottom of Petri dishes facing the light source. The repeatability of spectra in these conditions was assessed with an average coefficient of variation inferior to 5% in the 12,500–3680 cm−1 range. Secondly, 40 strains of Lactococcus and Enterococcus species were grown on Bennett agar and measured over a series of five assays. Principal component analyses highlighted better clustering according to genera and species and lower external bias while retaining the 8790–3680 cm−1 spectral range and applying an extended multiplicative scatter correction with an average agar spectrum as a reference, in comparison to raw data and standard multiplicative scatter correction.


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