High-resolution structural profile of hylaseptin-4: Aggregation, membrane topology and pH dependence of overall membrane binding process

2021 ◽  
Vol 1863 (5) ◽  
pp. 183581
Author(s):  
L.O. Nunes ◽  
V.H.O. Munhoz ◽  
A.A. Sousa ◽  
K.R. de Souza ◽  
T.L. Santos ◽  
...  
2004 ◽  
Vol 57 (5) ◽  
pp. 415 ◽  
Author(s):  
Jason Dang ◽  
B. Mikael Bergdahl ◽  
Frances Separovic ◽  
Robert T. C. Brownlee ◽  
Robert P. Metzger

The conformation of virginiamycin M1 (VM1) in chloroform, determined by high-resolution NMR experiments, differs significantly from that of the X-ray crystal structure of VM1 bound to the 50S ribosome and to the active site of a streptogramin acetyltransferase enzyme. This implies that the binding process to these entities causes a major change in VM1 conformation.


2020 ◽  
Vol 295 (26) ◽  
pp. 8819-8833 ◽  
Author(s):  
Petra Junková ◽  
Roman Pleskot ◽  
Jan Prchal ◽  
Jakub Sýs ◽  
Tomáš Ruml

Retroviral Gag polyproteins are targeted to the inner leaflet of the plasma membrane through their N-terminal matrix (MA) domain. Because retroviruses of different morphogenetic types assemble their immature particles in distinct regions of the host cell, the mechanism of MA-mediated plasma membrane targeting differs among distinct retroviral morphogenetic types. Here, we focused on possible mechanistic differences of the MA-mediated plasma membrane targeting of the B-type mouse mammary tumor virus (MMTV) and C-type HIV-1, which assemble in the cytoplasm and at the plasma membrane, respectively. Molecular dynamics simulations, together with surface mapping, indicated that, similarly to HIV-1, MMTV uses a myristic switch to anchor the MA to the membrane and electrostatically interacts with phosphatidylinositol 4,5-bisphosphate to stabilize MA orientation. We observed that the affinity of MMTV MA to the membrane is lower than that of HIV-1 MA, possibly related to their different topologies and the number of basic residues in the highly basic MA region. The latter probably reflects the requirement of C-type retroviruses for tighter membrane binding, essential for assembly, unlike for D/B-type retroviruses, which assemble in the cytoplasm. A comparison of the membrane topology of the HIV-1 MA, using the surface-mapping method and molecular dynamics simulations, revealed that the residues at the HIV-1 MA C terminus help stabilize protein–protein interactions within the HIV-1 MA lattice at the plasma membrane. In summary, HIV-1 and MMTV share common features such as membrane binding of the MA via hydrophobic interactions and exhibit several differences, including lower membrane affinity of MMTV MA.


FEBS Letters ◽  
1993 ◽  
Vol 329 (1-2) ◽  
pp. 5-8 ◽  
Author(s):  
Ulrich Küsthardt ◽  
Britt Hedman ◽  
Keith O. Hodgson ◽  
Rainer Hahn ◽  
Hans Yilter

PLoS ONE ◽  
2014 ◽  
Vol 9 (12) ◽  
pp. e114473 ◽  
Author(s):  
Wanapinun Nawae ◽  
Supa Hannongbua ◽  
Marasri Ruengjitchatchawalya

2004 ◽  
Vol 385 (1) ◽  
pp. 225-232 ◽  
Author(s):  
Daniel AGRANOFF ◽  
Lauren COLLINS ◽  
David KEHRES ◽  
Tom HARRISON ◽  
Michael MAGUIRE ◽  
...  

Cryptococcus neoformans is an important human opportunistic pathogen and a facultative intracellular parasite, particularly in HIV-infected individuals. Little is known about metal ion transport in this organism. C. neoformans encodes a single member of the Nramp (natural resistance-associated macrophage protein) family of bivalent cation transporters, known as Cramp, which we have cloned and expressed in Xenopus laevis oocytes and Spodoptera frugiperda Sf 21 insect cells. Cramp induces saturable transport of a broad range of bivalent transition series cations, including Mn2+, Fe2+, Co2+ and Ni2+. Maximal cation transport occurs at pH 5.5–6.0, consistent with the proton gradient-based energetics of other Nramp orthologues. Mn2+ transport is diminished in the presence of 140 mM Na+, compatible with a Na+ slippage mechanism proposed for the Saccharomyces cerevisiae Nramp orthologue Smf1p. Cramp resembles Smf1p with respect to predicted membrane topology, substrate specificity and pH dependence, but differs in terms of its apparent affinity for Mn2+ and negligible inhibition by Zn2+. Cramp is the first Nramp orthologue from a fungal pathogen to be functionally characterized. Insights afforded by these findings will allow the formulation of new hypotheses regarding the role of metal ions in the pathophysiology of cryptococcosis.


1993 ◽  
Vol 268 (12) ◽  
pp. 8815-8824
Author(s):  
C. Bardelle ◽  
B. Furie ◽  
B.C. Furie ◽  
G.E. Gilbert

1981 ◽  
Author(s):  
M H Fukami ◽  
K Ugurbil ◽  
H Holmsen ◽  
G L Pakstis ◽  
C A Dangelmaier

In the course of high resolution nuclear magnetic resonance (n.m.r.) studies of dense granule storage complexes, an amine with two aromatic protons was observed in a proton n.m.r. spectrum of dense granules isolated from pig platelets. This amine was identified as histamine by the exact coincidence of the n.m.r. peaks of added histamine with the unknown peaks in the extract. The pH dependence of chemical shifts, paper chromatography and flurometric analysis after coupling with o-phthalaldehyde confirmed the identification. The concentration of histamine in isolated dense granules was about 700 nmol/mg of protein (n=3) or 1.6 times that of serotonin. In intact platelets, the histamine content was 11 nmol/mg compared to 7 nmol/mg of serotonin. The addition of 1 unit/ml of thrombin to suspensions of washed pig platelets resulted in the secretion of more than 90% of the histamine under conditions in which only 3.8% of thelactate dehydrogenase appeared extracellularly. These findings indicate that histamine is a major constituent of dense granules in pig platelets which can be released during hemostasis and thrombosis and may exert its pharmacological effects under these conditions.


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