Identification of high-stringency DNA hairpin probes by partial gene folding

2007 ◽  
Vol 23 (2) ◽  
pp. 233-240 ◽  
Author(s):  
Christopher M. Strohsahl ◽  
Todd D. Krauss ◽  
Benjamin L. Miller
Sensors ◽  
2017 ◽  
Vol 17 (4) ◽  
pp. 760 ◽  
Author(s):  
Changbei Ma ◽  
Haisheng Liu ◽  
Kefeng Wu ◽  
Mingjian Chen ◽  
Liyang Zheng ◽  
...  

2011 ◽  
Vol 2011 ◽  
pp. 1-6 ◽  
Author(s):  
Joel Rivera-Gandía ◽  
Maria del Mar Maldonado ◽  
Yarimar De La Torre-Meléndez ◽  
Edwin O. Ortiz-Quiles ◽  
Nella M. Vargas-Barbosa ◽  
...  

An interfacial capacitance measurement electrochemical technique has been used for the sensing of self-assembled DNA hairpin probes (M. tuberculosisandB. anthracis) attached to Au electrodes. The double-layer capacitance (Cdl) was determined with electrochemical perturbations from 0.2 V to 0.5 V versus Ag/AgCl at a Au/M. tuberculosisDNA hairpin probe at surface coverage Au electrodes. The capacitance study was done at pH 7, which was necessary to maintain theM. tuberculosis and B. anthracisDNA probes closed during the electrochemical perturbation. Detailed experimental analysis carried out by repetitively switching the electrochemical potential between 0.2 and 0.5 V (versus Ag/AgCl) strongly supports the use of capacitance measurements as a tool to detect the hybridization of DNA targets. A large change in the capacitance deference between 0.2 and 0.5 V was observed in the DNA hybridization process. Therefore, no fluorophores or secondary transducers were necessary to sense a DNA target for both DNA hairpins.


2006 ◽  
pp. 3122 ◽  
Author(s):  
Caitriona B. Spillane ◽  
Joy L. Morgan ◽  
Nicholas C. Fletcher ◽  
J. Grant Collins ◽  
F. Richard Keene
Keyword(s):  

Author(s):  
Shu-Mei Fan ◽  
Chang-Yue Chiang ◽  
Yen-Ta Tseng ◽  
Tsung-Yan Wu ◽  
Yen-Ling Chen ◽  
...  

2020 ◽  
Vol 38 (3) ◽  
pp. 199
Author(s):  
Narendra Yoga Hendarta ◽  
Abu Tholib Aman ◽  
Asmarani Kusumawati ◽  
Tri Wibawa

Lateral flow assay (LFD) based nucleic acid lateral flow (NALF)  method has been developed recently. The method met point of care testing (POCT) as simple and rapid procedures, less equipment, and can be performance by less skilled technician. NALF based on nucleic acid hybridizationis  more economical then immunochromatography assay which use antibody-antigen recognition. Cross hybridization has issued while used to differentiate organism with high GC content and high homology as high similarity genome. Some techniques has applied to give high stringency condition avoid cross hybridization reaction but need more procedure to apply. We found glycerol applied to buffer assay could reduce cross hybridization on nitrocellulose membrane. The study used 2 kinds of high stringency buffer as PBS and SSC bases and high concentration of ssDNA amplicon as sample. Without glycerol ingredient gave cross hybridization signal on test line. But used glycerol could reduce those even omitted with PBS based buffer assay. Beside those, glycerol could significantly increased hybridization signal in SSC based buffer assay (p<0.05).


2000 ◽  
Vol 104 (48) ◽  
pp. 11551-11555 ◽  
Author(s):  
Mark Ian Wallace ◽  
Liming Ying ◽  
Shankar Balasubramanian ◽  
David Klenerman

Biochemistry ◽  
1986 ◽  
Vol 25 (17) ◽  
pp. 4840-4849 ◽  
Author(s):  
Satoshi Ikuta ◽  
Rajagopal Chattopadhyaya ◽  
Hirataka Ito ◽  
Richard E. Dickerson ◽  
David R. Kearns
Keyword(s):  

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