Molecular Dynamics Analysis on the Role of the N-Terminal Domain in Mechano-Gating of E-Coli Mechanosensitive Channel MscL

Yasuyuki Sawada; Masahiro Sokabe

doi:10.1016/j.bpj.2013.11.3688

Molecular Dynamics Analysis on the Role of the N-Terminal Domain in Mechano-Gating of E-Coli Mechanosensitive Channel MscL

Biophysical Journal ◽

10.1016/j.bpj.2013.11.3688 ◽

2014 ◽

Vol 106 (2) ◽

pp. 666a

Author(s):

Yasuyuki Sawada ◽

Masahiro Sokabe

Keyword(s):

Molecular Dynamics ◽

Mechanosensitive Channel ◽

Dynamics Analysis ◽

E Coli ◽

Terminal Domain

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3PT132 Molecular Dynamics Analysis of the Role of Protein-Water Interplay in the Opening Process of E-coli Mechanosensitive Channel MscL(The 50th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.52.s163_3 ◽

2012 ◽

Vol 52 (supplement) ◽

pp. S163

Author(s):

Yasuyuki Sawada ◽

Masahiro Sokabe

Keyword(s):

Molecular Dynamics ◽

Annual Meeting ◽

Mechanosensitive Channel ◽

Dynamics Analysis ◽

E Coli ◽

Biophysical Society ◽

Opening Process

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3B0912 Molecular Dynamics Analysis on the Roles Conformational Change and Water in the Opening Process of E-coli Mechanosensitive Channel MscL(3B Membrane proteins 2,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s108_3 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S108

Author(s):

Yasuyuki Sawada ◽

Masahiro Sokabe

Keyword(s):

Molecular Dynamics ◽

Membrane Proteins ◽

Annual Meeting ◽

Conformational Change ◽

Mechanosensitive Channel ◽

Dynamics Analysis ◽

E Coli ◽

Biophysical Society ◽

Opening Process

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The Role of the N-Terminal Domain in the Regulation of the “Constitutively Active” Conformation of Protein Kinase CK2α: Insight from a Molecular Dynamics Investigation

ChemMedChem ◽

10.1002/cmdc.201100046 ◽

2011 ◽

Vol 6 (7) ◽

pp. 1207-1216 ◽

Cited By ~ 5

Author(s):

Andrea Cristiani ◽

Giorgio Costa ◽

Giorgio Cozza ◽

Flavio Meggio ◽

Leonardo Scapozza ◽

...

Keyword(s):

Molecular Dynamics ◽

Protein Kinase ◽

Active Conformation ◽

Terminal Domain ◽

Constitutively Active

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1P-030 Analysis of Tension Sensing Sites of E-coli Mechanosensitive Channel MscL Using Molecular Dynamics Simulations(The 46th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.48.s25_4 ◽

2008 ◽

Vol 48 (supplement) ◽

pp. S25

Author(s):

Yasuyuki Sawada ◽

Masaki Murase ◽

Masahiro Sokabe

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Annual Meeting ◽

Mechanosensitive Channel ◽

E Coli ◽

Biophysical Society ◽

Dynamics Simulations

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2P158 Molecular Dynamics Simulations of Mechano-Gating in the E-coli Mechanosensitive Channel MscL(34. Membrane protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s335_2 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S335

Author(s):

Yasuyuki Sawada ◽

Masaki Murase ◽

Masahiro Sokabe

Keyword(s):

Molecular Dynamics ◽

Membrane Protein ◽

Molecular Dynamics Simulations ◽

Poster Session ◽

Mechanosensitive Channel ◽

E Coli ◽

Meeting Program ◽

Dynamics Simulations

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Molecular Dynamics Study on the Role of Protein-Water Interplay in the Opening Process of Mechanosensitive Channel MscL

Biophysical Journal ◽

10.1016/j.bpj.2011.11.686 ◽

2012 ◽

Vol 102 (3) ◽

pp. 123a

Author(s):

Yasuyuki Sawada ◽

Masahiro Sokabe

Keyword(s):

Molecular Dynamics ◽

Mechanosensitive Channel ◽

Opening Process

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The role of configurational disorder on plastic and dynamic deformation in Cu64Zr36 metallic glasses: A molecular dynamics analysis

Scientific Reports ◽

10.1038/srep40969 ◽

2017 ◽

Vol 7 (1) ◽

Cited By ~ 16

Author(s):

S. D. Feng ◽

K. C. Chan ◽

S. H. Chen ◽

L. Zhao ◽

R. P. Liu

Keyword(s):

Molecular Dynamics ◽

Metallic Glasses ◽

Dynamic Deformation ◽

Dynamics Analysis

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Steered molecular dynamics analysis of the role of cofilin in increasing the flexibility of actin filaments

Biophysical Chemistry ◽

10.1016/j.bpc.2016.08.002 ◽

2016 ◽

Vol 218 ◽

pp. 27-35 ◽

Cited By ~ 5

Author(s):

Jae In Kim ◽

Junpyo Kwon ◽

Inchul Baek ◽

Sungsoo Na

Keyword(s):

Molecular Dynamics ◽

Actin Filaments ◽

Steered Molecular Dynamics ◽

Dynamics Analysis

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1P104 The N-terminal domain acts as a mechanosensor in the gating of the bacterial mechanosensitive channel MscL : molecular dynamics study(03. Membrane proteins,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s158_2 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S158

Author(s):

Yasuyuki Sawada ◽

Masahiro Sokabe

Keyword(s):

Molecular Dynamics ◽

Membrane Proteins ◽

Annual Meeting ◽

Mechanosensitive Channel ◽

Terminal Domain ◽

Biophysical Society

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3P-087 Role of Water Penetration and Permeation in Mechano-Gating of the E-coli Mechanosensitive Channel MscL(Membrane proteins,The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s165_6 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S165-S166

Author(s):

Yasuyuki Sawada ◽

Masaki Murase ◽

Masahiro Sokabe

Keyword(s):

Membrane Proteins ◽

Annual Meeting ◽

Mechanosensitive Channel ◽

Water Penetration ◽

E Coli ◽

Biophysical Society

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