Metabolic flux analysis of a phenol producing mutant of Pseudomonas putida S12: Verification and complementation of hypotheses derived from transcriptomics

Nick Wierckx; Harald J. Ruijssenaars; Johannes H. de Winde; Andreas Schmid; Lars M. Blank

doi:10.1016/j.jbiotec.2009.06.023

Metabolic flux analysis of a phenol producing mutant of Pseudomonas putida S12: Verification and complementation of hypotheses derived from transcriptomics

Journal of Biotechnology ◽

10.1016/j.jbiotec.2009.06.023 ◽

2009 ◽

Vol 143 (2) ◽

pp. 124-129 ◽

Cited By ~ 19

Author(s):

Nick Wierckx ◽

Harald J. Ruijssenaars ◽

Johannes H. de Winde ◽

Andreas Schmid ◽

Lars M. Blank

Keyword(s):

Pseudomonas Putida ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Flux Analysis

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GC-MS-based 13C metabolic flux analysis resolves the parallel and cyclic glucose metabolism of Pseudomonas putida KT2440 and Pseudomonas aeruginosa PAO1

Metabolic Engineering ◽

10.1016/j.ymben.2019.01.008 ◽

2019 ◽

Vol 54 ◽

pp. 35-53 ◽

Cited By ~ 30

Author(s):

Michael Kohlstedt ◽

Christoph Wittmann

Keyword(s):

Pseudomonas Aeruginosa ◽

Glucose Metabolism ◽

Pseudomonas Putida ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Flux Analysis ◽

Pseudomonas Putida Kt2440 ◽

Pseudomonas Aeruginosa Pao1 ◽

13C Metabolic Flux Analysis

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Metabolic flux analysis of Escherichia coli K-12 based on 13C-labeling experiments with measurement of intracellular metabolite concentrations for carbon source-limited and nitrogen source-limited chemostat cultures

Metabolic Engineering ◽

10.1016/s1096-7176(03)00045-4 ◽

2003 ◽

Author(s):

J Zhu

Keyword(s):

Escherichia Coli ◽

Carbon Source ◽

Nitrogen Source ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Flux Analysis ◽

Intracellular Metabolite ◽

Chemostat Cultures ◽

Metabolite Concentrations ◽

K 12

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Faculty Opinions recommendation of Evaluation of 13C isotopic tracers for metabolic flux analysis in mammalian cells.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1748956.1271054 ◽

2010 ◽

Author(s):

Hans van Beek

Keyword(s):

Metabolic Flux Analysis ◽

Mammalian Cells ◽

Metabolic Flux ◽

Flux Analysis ◽

Isotopic Tracers

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Metabolic flux analysis of the central carbon metabolism of the industrial vitamin B12 producing strain Pseudomonas denitrificans using 13C-labeled glucose

Journal of the Taiwan Institute of Chemical Engineers ◽

10.1016/j.jtice.2011.09.002 ◽

2012 ◽

Vol 43 (2) ◽

pp. 181-187 ◽

Cited By ~ 5

Author(s):

Ze-Jian Wang ◽

Ping Wang ◽

Yu-Wei Liu ◽

Yi-Ming Zhang ◽

Ju Chu ◽

...

Keyword(s):

Vitamin B12 ◽

Carbon Metabolism ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Central Carbon Metabolism ◽

Flux Analysis ◽

Pseudomonas Denitrificans ◽

Central Carbon

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Metabolic Flux Analysis of Simultaneous Production of Vitamin B12 and Propionic Acid in a Coupled Fermentation Process by Propionibacterium freudenreichii

Applied Biochemistry and Biotechnology ◽

10.1007/s12010-021-03584-y ◽

2021 ◽

Author(s):

Yuhan Zhang ◽

Xiaolian Li ◽

Ziqiang Wang ◽

Yunshan Wang ◽

Yuanyuan Ma ◽

...

Keyword(s):

Vitamin B12 ◽

Propionic Acid ◽

Metabolic Flux Analysis ◽

Fermentation Process ◽

Metabolic Flux ◽

Flux Analysis ◽

Propionibacterium Freudenreichii ◽

Simultaneous Production

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13C metabolic flux analysis in cell line and bioprocess development

Current Opinion in Chemical Engineering ◽

10.1016/j.coche.2021.100718 ◽

2021 ◽

Vol 34 ◽

pp. 100718

Author(s):

Sarah A Sacco ◽

Jamey D Young

Keyword(s):

Cell Line ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Flux Analysis ◽

Bioprocess Development ◽

13C Metabolic Flux Analysis

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The benefits of being transient: isotope-based metabolic flux analysis at the short time scale

Applied Microbiology and Biotechnology ◽

10.1007/s00253-011-3390-4 ◽

2011 ◽

Vol 91 (5) ◽

pp. 1247-1265 ◽

Cited By ~ 56

Author(s):

Katharina Nöh ◽

Wolfgang Wiechert

Keyword(s):

Metabolic Flux Analysis ◽

Time Scale ◽

Metabolic Flux ◽

Short Time Scale ◽

Flux Analysis ◽

Short Time

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Metabolic Flux Analysis of the Phenylpropanoid Pathway in Wound-Healing Potato Tuber Tissue using Stable Isotope-Labeled Tracer and LC-MS Spectroscopy

Plant and Cell Physiology ◽

10.1093/pcp/pcg127 ◽

2003 ◽

Vol 44 (9) ◽

pp. 961-961 ◽

Cited By ~ 2

Author(s):

Fumio Matsuda ◽

Keiko Morino ◽

Masahiro Miyashita ◽

Hisashi Miyagawa

Keyword(s):

Wound Healing ◽

Stable Isotope ◽

Potato Tuber ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Phenylpropanoid Pathway ◽

Flux Analysis ◽

Tuber Tissue ◽

Potato Tuber Tissue

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13C-metabolic flux analysis of ethanol-assimilating Saccharomyces cerevisiae for S-adenosyl-l-methionine production

Microbial Cell Factories ◽

10.1186/s12934-018-0935-6 ◽

2018 ◽

Vol 17 (1) ◽

Cited By ~ 5

Author(s):

Kenshi Hayakawa ◽

Fumio Matsuda ◽

Hiroshi Shimizu

Keyword(s):

Saccharomyces Cerevisiae ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Flux Analysis ◽

13C Metabolic Flux Analysis

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Metabolic flux analysis of Escherichia coli K12 grown on 13C-labeled acetate and glucose using GC-MS and powerful flux calculation method

Journal of Biotechnology ◽

10.1016/s0168-1656(02)00316-4 ◽

2003 ◽

Vol 101 (2) ◽

pp. 101-117 ◽

Cited By ~ 114

Author(s):

Jiao Zhao ◽

Kazuyuki Shimizu

Keyword(s):

Escherichia Coli ◽

Metabolic Flux Analysis ◽

Calculation Method ◽

Metabolic Flux ◽

Flux Analysis ◽

Flux Calculation ◽

Escherichia Coli K12

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