Hydroxamide derivatives of short-chain fatty acids are potent inducers of human fetal globin gene expression

2003 ◽  
Vol 31 (3) ◽  
pp. 197-203 ◽  
Author(s):  
Evangelia Skarpidi ◽  
Hua Cao ◽  
Birgit Heltweg ◽  
Brian F White ◽  
Ronald L Marhenke ◽  
...  
Blood ◽  
2010 ◽  
Vol 116 (21) ◽  
pp. 2080-2080 ◽  
Author(s):  
Radha Raghupathy ◽  
Shay Karkashon ◽  
Melissa J Fazzari ◽  
Jane A Little

Abstract Abstract 2080 Elevated fetal hemoglobin (HbF) is ameliorative for beta-globin gene disorders. Butyrate, a short chain fatty acid, is a potent inducer of fetal hemoglobin with limited clinical applicability. We wanted to examine non-globin gene targets of butyrate that are regulated in definitive erythroid cells prior to the induction of embryonic/fetal beta-type globin genes. Mechanistic insights may improve clinical utility for short chain fatty acids by identifying novel molecular therapeutic targets. Induced embryonic/fetal globin gene expression is detectable in murine fetal liver-derived definitive erythroid cells (FL EryD) from wildtype and human beta-globin YAC transgenic mice after 19 hours in culture with butyrate & erythropoietin (EPO), but not in EPO alone. Differential regulation of non-globin gene targets in wildtype FL EryD was studied on a Mouse Gene 1.0ST Affymetrix Array after culture in EPO only or butyrate & EPO at 6 hours (when no embryonic globin gene expression is detectable, n=3). Data from biological replicates were normalized by robust multichip average and analyzed with expression console software. As shown in Table 1, several confirmed and putative repressors of embryonic/fetal beta-type globin gene expression, including SOX6, Bcl11A, and Ikaros 1 (but not cMyb) were significantly down regulated by Butyrate at 6 hours (n=3); this was confirmed by RT-PCR. The histone deacetylase inhibitor trichostatin A (TSA), which also induces embryonic globin gene expression in murine FL EryD, has a directionally similar effect (Table 1). Down regulation of some fetal/embryonic globin gene repressors, relative to identically handled EPO-only treated samples, was detectable by RT-PCR as early as 60 to 120 minutes after butyrate induction. These repressors included Bcl11A (60min: 0.66±0.005, p<.001, n=2; 120min: 0.4±0.24, p<.01, n=4), Sox6 (60min: 0.55± 0.18, p=0.08, n=2; 120min: 0.63± 0.06, p<.001, n=4) and Ikaros1 (60min: 0.63±0.45, p=0.36, n=2; 120min: 0.42±0.15, p<.001, n=4). The proximate molecular mechanisms through which butyrate act, while unknown in detail, have been posited to include ‘stress’ signaling via p38 and/or direct activation of gamma-globin gene expression through inhibited histone deacetylation. We found no evidence for butyrate-mediated enhancement of p38 phosphorylation in FL EryD at 0–120 minutes in culture. However, bulk histone acetylation measured by western for histone 3 (H3), was >1.5 fold greater with butyrate induction at 60–90 minutes relative to baseline, while less than baseline in EPO-only treated FL EryD (n=2). Cumulatively, these data suggest that the down regulation by butyrate of major molecular repressors of embryonic/fetal globin gene expression, likely mediated directly or indirectly through epigenetic modifications, is a key underlying mechanism for the induction of fetal hemoglobin in definitive erythroid cells by short chain fatty acids. Disclosures: No relevant conflicts of interest to declare.


Blood ◽  
2005 ◽  
Vol 106 (11) ◽  
pp. 3646-3646
Author(s):  
Jennifer L. Hallock ◽  
Lauren J. Sterner ◽  
Jane A. Little

Abstract Embryonic/fetal-type globin genes are known to be up-regulated in models of adult erythropoiesis following exposure to short-chain fatty acids (SCFAs, butyrate or propionate), in a subset of beta-globin gene disorder patients treated with SCFAs, and in children with metabolic disorders that result in high levels of endogenous SCFAs. Here, we investigate a role for SCFAs during development, using a murine embryonic stem (ES) cell model. Globin gene expression and cell-surface marker presentation were examined in murine embryoid bodies (EBs), which differentiate from ES cells and which recapitulate many features of early murine development. ES cells were allowed to differentiate (through the removal of both LIF and contact inhibition, without cytokines), in the absence or presence of SCFAs. Expression of alpha- and beta-type globin gene RNA and transcription factor RNA in the developing EBs was analyzed daily or every-other-day for 10–14 days by real-time PCR with gene-specific primers and probes. At day +2 and +6 /7 EBs were disaggregated, labeled, and analyzed by fluorescent-activated cell sorting (FACS) with labeled antibodies that had been raised against cell-surface markers of hematopoietic and endothelial differentiation. Globin gene expression was augmented by SCFAs in all experiments, with maximal induction, when compared with untreated cells, at approximately day + 7 of differentiation; Comparative globin gene expression, between propionate-exposed and untreated, in 3 separate EB experiments and normalized to 18S expression, was variable, but was elevated for all globin genes examined, as shown in Table I. Absolute RNA expression, normalized to 18S in a representative experiment testing butyrate or propionate as inducers, indicated that alpha, zeta, and beta H1/0 were effected most by SCFAs, (in which expression ranged between 30- and 40-fold relative to 18S) while Beta major and Epsilon-y (ranging between 1- and 7-fold relative to 18S) were effected to a much lesser extent; This trend, in which alpha, zeta, and Beta H1/0 induction by SCFAs was more dramatic than that seen for Epsilon-y and beta major induction, was noted in all experiments. In a single analysis, RNA for BMP-4 and GATA-2 was up-regulated on D + 7 by SCFAs at, respectively, 7- and 18- fold, which was not true for other hematopoietic transcription factors examined, such as LMO-2, GATA-1, EKLF-1, or AML-1, FACS analyses of untreated vs. SCFA-treated EBs in three separate experiments were analyzed with a screening gate for hematopoietic cells (CKit). These experiments showed a modest increase in the hematopoietic marker CD34 in SCFA-treated vs. un-treated cells; a doubling in CKit-positive calls that expressed late erythroid markers on Day + 6, from 5.6 +/− 2% to 12.1 +/− 6.0 % TER-119 positive (P&lt;.05), and a 3-fold, but variable increase, from 1.4 +/− 1.5 % to 4.2 +/− 4.1 % EPO-Receptor positive (n.s.). Expression of CD 45, CD 41, PECAM, and FLK-1 was not consistently different between EBs differentiated in the absence or presence of SCFAs. These data suggest that SCFAs minimally enhance hematopoiesis, but markedly enhance erythropoiesis, during differentiation in a murine developmental model; we speculate that SCFAs and related compounds could play a similar role in vivo during development. Range of globin gene expression, SCFA- vs. un-treated EBs Globin Genes Fold-expression Alpha 5- to 22-fold Zeta 4.2- to 35-fold Beta H1/0 5- to 22.5-fold Epsilon-y 9-to 96-fold Beta Major 2.5- to 22-fold


Blood ◽  
2009 ◽  
Vol 114 (22) ◽  
pp. 460-460
Author(s):  
Amrita Dutta ◽  
Himanshu Bhatia ◽  
Shay Karkashon ◽  
Lydia Tesfa ◽  
Jane Little

Abstract Abstract 460 Augmentation of fetal hemoglogin (HbF) is therapeutically desirable in β –globin gene disorders, such as sickle cell anemia and β-thalassemia. Short chain fatty acids (SCFAs) can augment embryonic/fetal β-type globin gene expression in vivo and in vitro during adult definitive erythropoiesis (EryD), but the underlying molecular mechanisms are not well understood. p38 signaling, triggered by stress erythropoiesis, has been implicated in the induction of fetal globin gene expression. Here, we examined p38 signaling and its effects using a murine primary cell model of EryD, isolated from fetal liver. This model overcomes some limitations of previously used transformed or long-term primary cell models, and has afforded complementary data. E14.5 erythroid fetal cells (eFLCs) were examined at harvest and after culture in insulin and erythropoietin (‘ins/EPO') with or without the SCFA butyrate, and in the presence or absence of p38 inhibitors SB 203580, SB 202190, PD 169316 at concentrations of 0-50 μM for up to 72 hours. Western blots showed that p38 phosphorylation was constitutive at harvest and preserved in cultures with ins/EPO, but was diminished by half after concurrent culture in PD169316. Embryonic globin gene expression, ((βH1+εY)/(βH1+εY+βMAJ) × 100), was analyzed by real-time PCR, normalized to 18S expression. Embryonic globin gene induction, relative to maximal expression at 72 hours in butyrate with ins/EPO, was blocked in a dose dependent manner by all inhibitors of p38 signaling, at 10-30% of maximal induction when cultured in 50 mM of any inhibitor. Primary transcripts from the adult β-globin gene, βmaj, were likewise diminished by p38 inhibition, with a median level of 8.3% and 4.0% of maximal transcript in ins/EPO and butyrate & ins/EPO respectively after culture for 72 hours in 50 μM PD 169316 (n=3, p<.01 relative to non-inhibited cultures). Erythroid differentiation, analyzed by FACS quantitation of CD71 and TER119 co-immunostaining, was delayed by p38 inhibitors, with 22-38% of ins/EPO +/- SCFA-treated cells comprised of orthochromatophilic cells after 72 hours, compared with 4-8% of parallely treated cells to which p38 inhibitors had been added. To further explore stress erythropoesis, cell divisions were analyzed using carboxyfluorescein succinimidyl ester (a fluorescent cytoplasmic dye that is diluted with each cell division) as monitored by FACS. Cell divisions were modestly slowed, but not blocked, by SCFAs. A median of 60% of ins/EPO-, vs. 29% of butyrate & ins/EPO-, treated cells had undergone 2 cell divisions at 48 hours (n=2, p<.05), but by 72 hours a median of 56% and 51% of treated cells, respectively, had completed 2 divisions (n=2, p=n.s.). In contrast, cell division was perturbed by p38 inhibitors, with <26% of eFLCs having undergone a 2nd division by 72 hours. Our studies suggest that p38 signaling is required for, but is not specific to, the SCFA-mediated induction of embryonic/fetal globin gene expression. We do not find that p38 phosphorylation is stimulated by SCFAs in short-term primary EryD. The central role that p38 signaling plays in the induction of embryonic and fetal globin gene expression, as manifested by lost induction with p38 inhibition, may instead reflect p38's constitutive function in cell division and differentiation. Disclosures: No relevant conflicts of interest to declare.


Blood ◽  
1995 ◽  
Vol 86 (8) ◽  
pp. 3227-3235 ◽  
Author(s):  
E Liakopoulou ◽  
CA Blau ◽  
Q Li ◽  
B Josephson ◽  
JA Wolf ◽  
...  

Abstract Butyrate, a four-carbon fatty acid, and its two-carbon metabolic product, acetate, are inducers of gamma-globin synthesis. To test whether other short-chain fatty acids share this property, we first examined whether propionic acid, a three-carbon fatty acid that is not catabolized to acetate, induces gamma-globin expression. Sodium propionate increased the frequency of fetal hemoglobin containing erythroblasts and the gamma/gamma + beta mRNA ratios in adult erythroid cell cultures and F reticulocyte production in a nonanemic juvenile baboon. Short-chain fatty acids containing five (pentanoic), six (hexanoic), seven (heptanoic), eight (octanoic), and nine (nonanoic) carbons induced gamma-globin expression (as measured by increase in gamma-positive erythroblasts and gamma/gamma + beta mRNA ratios) in adult erythroid burst-forming unit cultures. There was a clear-cut relationship between the concentration of fatty acids in culture and the degree of induction of gamma-globin expression. Three-, four-, and five-carbon fatty acids were better inducers of gamma globin in culture as compared with six- to nine-carbon fatty acids. These results suggest that all short-chain fatty acids share the property of gamma-globin gene inducibility. The fact that valproic acid, a derivative of pentanoic acid, also induces gamma-globin expression suggests that short-chain fatty acid derivatives that are already approved for human use may possess the property of gamma-globin inducibility and may be of therapeutic relevance to the beta-chain hemoglobinopathies.


Blood ◽  
2004 ◽  
Vol 104 (11) ◽  
pp. 1210-1210
Author(s):  
Lauren Sterner ◽  
Toru Miyazaki ◽  
Larry Swift ◽  
Ann Dean ◽  
Jane Little

Abstract We examined the effects of short chain fatty acids (SCFAs) on globin gene expression during development. We studied globin gene expression in transgenic mice that have endogenous elevations in the SCFA propionate due to a knockout (KO) of the gene for propionyl CoA carboxylase subunit A (PCCA, Miyazaki et al. JBC, 2001 Sep 21;276(38):35995–9). Serum propionate levels measured by gas chromatography were 2.5 to 3.6 mgms/ml in 2 adult PCCA KO mice and were undetectable in 2 wild type (wt) or heterozygous control adult mice. Embryonic PCCA KO offspring had propionate levels of 2.3 and 5.0 μgms/100 mgms of fetal liver, at day 16.5 (E16.5), while wt or heterozygotes at E14.5 had levels &lt;1 μgm/100 mgms. Analysis of expression from alpha (α), beta major (βmaj), embryonic beta-type epsilon-y (εy), embryonic beta-type beta H1 (βH1) and embryonic alpha-type zeta (ζ) globin genes plus 18S ribosomal RNA as a control was undertaken using real-time PCR with gene-specific primers and taqman probes. cDNA was reverse-transcribed from the mRNA of yolk sac (YS) and fetal liver of PCCA KO and wt progeny of more than one litter from timed pregnancies. Individual PCCA embryos at E10 (n=10), E12 (n=9), and E14 (n=7) were analyzed for globin gene expression, normalized to18S expression and were compared to age-matched wt embryos (n&gt;=4 for each time point). As expected, embryonic alpha- and beta-type globin gene expression (ζ and βH1 plus εy) predominated in E 10 YS, and definitive globin gene expression, α and βmaj, predominated in E12 or E14 fetal liver. Expression from embryonic alpha-type globin was calculated as normalized ζ/(ζ+α) and from embryonic beta-type globins as normalized (βH1+εy)/(βH1+εy+βmaj), see table. Embryonic globin gene expression was statistically significantly increased in PCCA KO E12 YS at 1.3 fold relative to wt ζ and in PCCA KO E14 YS at 1.8 fold and 2.1 fold relative to wt ζ or βH1 and εy respectively (p&lt;.05). No increase in embryonic globin mRNA was seen in adult PCCA KO animals. We conclude that elevations of SCFAs during normal murine development causes a persistence of both embryonic alpha-type and embryonic beta-type globin gene expression during primitive, but not definitive, erythropoiesis, suggesting that SCFAs cannot reactivate silenced murine embryonic globin genes in the absence of erythroid stress. Embryonic Globin Gene Expression in Mice with Endogenous Elevations of SCFAs % Expression PCCA KO wild type p value, t test E10 ζ Yolk Sac 53+/− 2 nd E10 βH1 & ε y Yolk Sac 99 +/− 0.3 nd E12 ζ Yolk Sac 32 +/− 3 25 +/− 1 p &lt; .05 E12 βH1 & ε y Yolk Sac 77 +/− 6 74 +/− 3 ns E14 ζ Yolk Sac 7 +/− 1.5 4 +/− 1.4 p &lt; .05 E14 βH1 & ε y Yolk Sac 13 +/− 6 6 +/− 0.5 p &lt; .05 E12 ζ Fetal Liver 11 +/− 4 9 +/− 2 ns E12 βH1 & ε y Fetal Liver 13 +/− 5 13+/− 3 ns E14 ζ Fetal Liver 1 +/− 0.4 0.7 +/− 0.2 ns E14 βH1 & εy Fetal Liver 6 +/− 1.8 4 +/− 1 ns


2006 ◽  
Vol 1107 (1) ◽  
pp. 13-23 ◽  
Author(s):  
Parul Shah ◽  
Bistra B. Nankova ◽  
Santosh Parab ◽  
Edmund F. La Gamma

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