In Situ Dissimilatory Nitrate Reduction to Ammonium in a Paddy Soil Fertilized with Liquid Cattle Waste

Pedosphere ◽  
2012 ◽  
Vol 22 (3) ◽  
pp. 314-321 ◽  
Author(s):  
Wei-Wei LU ◽  
S. RIYA ◽  
Sheng ZHOU ◽  
M. HOSOMI ◽  
Hai-Lin ZHANG ◽  
...  
2018 ◽  
Vol 84 (17) ◽  
Author(s):  
Arjun Pandey ◽  
Helen Suter ◽  
Ji-Zheng He ◽  
Hang-Wei Hu ◽  
Deli Chen

ABSTRACTDissimilatory nitrate reduction to ammonium (DNRA), denitrification, anaerobic ammonium oxidation (anammox), and biological N2fixation (BNF) can influence the nitrogen (N) use efficiency of rice production. While the effect of N application on BNF is known, little is known about its effect on NO3−partitioning between DNRA, denitrification, and anammox. Here, we investigated the effect of N application on DNRA, denitrification, anammox, and BNF and on the abundance of relevant genes in three paddy soils in Australia. Rice was grown in a glasshouse with N fertilizer (150 kg N ha−1) and without N fertilizer for 75 days, and the rhizosphere and bulk soils were collected separately for laboratory incubation and quantitative PCR analysis. Nitrogen application reduced DNRA rates by >16% in all the soils regardless of the rhizospheric zone, but it did not affect thenrfAgene abundance. Without N, the amount and proportion of NO3−reduced by DNRA (0.42 to 0.52 μg g−1soil day−1and 45 to 55%, respectively) were similar to or higher than the amount and proportion reduced by denitrification. However, with N the amount of NO3−reduced by DNRA (0.32 to 0.40 μg g−1soil day−1) was 40 to 50% lower than the amount of NO3−reduced by denitrification. Denitrification loss increased by >20% with N addition and was affected by the rhizospheric zones. Nitrogen loss was minimal through anammox, while BNF added 0.02 to 0.25 μg N g−1soil day−1. We found that DNRA plays a significant positive role in paddy soil N retention, as it accounts for up to 55% of the total NO3−reduction, but this is reduced by N application.IMPORTANCEThis study provides evidence that nitrogen addition reduces nitrogen retention through DNRA and increases nitrogen loss via denitrification in a paddy soil ecosystem. DNRA is one of the major NO3−reduction processes, and it can outcompete denitrification in NO3−consumption when rice paddies are low in nitrogen. A significant level of DNRA activity in paddy soils indicates that DNRA plays an important role in retaining nitrogen by reducing NO3−availability for denitrification and leaching. Our study shows that by reducing N addition to rice paddies, there is a positive effect from reduced nitrogen loss but, more importantly, from the conversion of NO3−to NH4+, which is the favored form of mineral nitrogen for plant uptake.


2010 ◽  
Vol 76 (18) ◽  
pp. 6239-6247 ◽  
Author(s):  
Peter Stief ◽  
Anna Behrendt ◽  
Gaute Lavik ◽  
Dirk De Beer

ABSTRACT Dissimilatory NO3 − reduction in sediments is often measured in bulk incubations that destroy in situ gradients of controlling factors such as sulfide and oxygen. Additionally, the use of unnaturally high NO3 − concentrations yields potential rather than actual activities of dissimilatory NO3 − reduction. We developed a technique to determine the vertical distribution of the net rates of dissimilatory nitrate reduction to ammonium (DNRA) with minimal physical disturbance in intact sediment cores at millimeter-level resolution. This allows DNRA activity to be directly linked to the microenvironmental conditions in the layer of NO3 − consumption. The water column of the sediment core is amended with 15NO3 − at the in situ 14NO3 − concentration. A gel probe is deployed in the sediment and is retrieved after complete diffusive equilibration between the gel and the sediment pore water. The gel is then sliced and the NH4 + dissolved in the gel slices is chemically converted by hypobromite to N2 in reaction vials. The isotopic composition of N2 is determined by mass spectrometry. We used the combined gel probe and isotopic labeling technique with freshwater and marine sediment cores and with sterile quartz sand with artificial gradients of 15NH4 +. The results were compared to the NH4 + microsensor profiles measured in freshwater sediment and quartz sand and to the N2O microsensor profiles measured in acetylene-amended sediments to trace denitrification.


2019 ◽  
Author(s):  
Ran Jiang ◽  
Shu-Xin Zhang ◽  
Gou Wei ◽  
Rui He ◽  
Li-Ling Yang ◽  
...  

Abstract. The potential rates of dissimilatory nitrate reduction to ammonium (DNRA) in the sediments collected from Huangmao Sea Estuary (HSE), one of Pearl River Estuaries in China, were investigated. The research covers a one-year period at 20 sites of HSE based on the 15N isotope and molecular biology analysis. The results showed that the environment gradients of nitrogen pollutants decreased from the estuary to the sea, and the characteristics of terrestrial pollutant export were obvious. 15NH4+ was detected in all sites in continuous-flow systems, which showed that DNRA existed in HSE potentially. In which the maximum 15NH4+ was 1948.5 μg/L, accordingly in situ rate of DNRA was 6.3 μg/L.h in 72 h. The high transcripts of nrfA gene were found at the same site, with values of 1 159 715 copics/(g wet sediment). Correspondingly, a very low transcripts of nrfA were found at other sites. Principal components analysis (PCA) based on community composition at genus level showed the distribution pattern of the nrfA gene sequences. Nine samples formed three distinct clusters, corresponding to their geographical locations, which suggested that salinity was likely to affect the selection of the nrfA bacterial populations. This study provide a better understanding of DNRA in the Pearl River Estuary.


2020 ◽  
Vol 35 (4) ◽  
pp. n/a
Author(s):  
Yosuke Nojiri ◽  
Yuka Kaneko ◽  
Yoichi Azegami ◽  
Yutaka Shiratori ◽  
Nobuhito Ohte ◽  
...  

2021 ◽  
Vol 206 ◽  
pp. 104815
Author(s):  
Yinghui Jiang ◽  
Guoyu Yin ◽  
Lijun Hou ◽  
Min Liu ◽  
Dengzhou Gao ◽  
...  

Nano Research ◽  
2021 ◽  
Author(s):  
Xiaoya Fan ◽  
Lisi Xie ◽  
Jie Liang ◽  
Yuchun Ren ◽  
Longcheng Zhang ◽  
...  

2016 ◽  
Vol 13 (8) ◽  
pp. 2429-2440 ◽  
Author(s):  
Lei Zhao ◽  
Christopher W. N Anderson ◽  
Guangle Qiu ◽  
Bo Meng ◽  
Dingyong Wang ◽  
...  

Abstract. Rice paddy plantation is the dominant agricultural land use throughout Asia. Rice paddy fields have been identified as important sites for methylmercury (MeHg) production in the terrestrial ecosystem and a primary pathway of MeHg exposure to humans in mercury (Hg) mining areas. We compared the source and distribution of Hg species in different compartments of the rice paddy during a complete rice-growing season at two different typical Hg-contaminated mining sites in Guizhou province, China: an abandoned site with a high Hg concentration in soil but a low concentration in the atmosphere and a current-day artisanal site with a low concentration in soil but a high concentration in the atmosphere. Our results showed that the flux of new Hg to the ecosystem from irrigation and atmospheric deposition was insignificant relative to the pool of old Hg in soil; the dominant source of MeHg to paddy soil is in situ methylation of inorganic Hg (IHg). Elevated MeHg concentrations and the high proportion of Hg as MeHg in paddy water and the surface soil layer at the artisanal site demonstrated active Hg methylation at this site only. We propose that the in situ production of MeHg in paddy water and surface soil is dependent on elevated Hg in the atmosphere and the consequential deposition of new Hg into a low-pH anoxic geochemical system. The absence of depth-dependent variability in the MeHg concentration in soil cores collected from the abandoned Hg mining site, consistent with the low concentration of Hg in the atmosphere and high pH of the paddy water and irrigation water, suggested that net production of MeHg at this site was limited. We propose that the concentration of Hg in ambient air is an indicator for the risk of MeHg accumulation in paddy rice.


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