Aspergillus flavus genomics: gateway to human and animal health, food safety, and crop resistance to diseases

2005 ◽  
Vol 22 (4) ◽  
pp. 194-202 ◽  
Author(s):  
Jiujiang Yu ◽  
Thomas E. Cleveland ◽  
William C. Nierman ◽  
Joan W. Bennett
2003 ◽  
Author(s):  
R. R. Kraeling ◽  
Eric J. Bush ◽  
N. E. Wineland ◽  
N. Anandaraman ◽  
S. Ladely ◽  
...  

2016 ◽  
Vol 371 (1709) ◽  
pp. 20160026 ◽  
Author(s):  
Bruce A. McDonald ◽  
Eva H. Stukenbrock

Agricultural ecosystems are composed of genetically depauperate populations of crop plants grown at a high density and over large spatial scales, with the regional composition of crop species changing little from year to year. These environments are highly conducive for the emergence and dissemination of pathogens. The uniform host populations facilitate the specialization of pathogens to particular crop cultivars and allow the build-up of large population sizes. Population genetic and genomic studies have shed light on the evolutionary mechanisms underlying speciation processes, adaptive evolution and long-distance dispersal of highly damaging pathogens in agro-ecosystems. These studies document the speed with which pathogens evolve to overcome crop resistance genes and pesticides. They also show that crop pathogens can be disseminated very quickly across and among continents through human activities. In this review, we discuss how the peculiar architecture of agro-ecosystems facilitates pathogen emergence, evolution and dispersal. We present four example pathosystems that illustrate both pathogen specialization and pathogen speciation, including different time frames for emergence and different mechanisms underlying the emergence process. Lastly, we argue for a re-design of agro-ecosystems that embraces the concept of dynamic diversity to improve their resilience to pathogens. This article is part of the themed issue ‘Tackling emerging fungal threats to animal health, food security and ecosystem resilience’.


2005 ◽  
Author(s):  
Paula J. Fedorka-Cray ◽  
R. R. Kraeling ◽  
N. E. Wineland ◽  
D. A. Dargatz ◽  
E. J. Busch ◽  
...  

2010 ◽  
Vol 76 (14) ◽  
pp. 4858-4862 ◽  
Author(s):  
Lisa M. Durso ◽  
Gregory P. Harhay ◽  
Timothy P. L. Smith ◽  
James L. Bono ◽  
Todd Z. DeSantis ◽  
...  

ABSTRACT The intestinal microbiota of beef cattle are important for animal health, food safety, and methane emissions. This full-length sequencing survey of 11,171 16S rRNA genes reveals animal-to-animal variation in communities that cannot be attributed to breed, gender, diet, age, or weather. Beef communities differ from those of dairy. Core bovine taxa are identified.


2014 ◽  
Vol 59 (No. 4) ◽  
pp. 194-201 ◽  
Author(s):  
J. Garcia-Diez ◽  
AC Coelho

Ante mortem and post mortem carcass condemnation records could be of use as a potential database for the study of swine diseases, epidemiology or animal welfare. Thus, the aim of this study was to investigate the causes of ante mortem rejections and post mortem carcass condemnation of pigs intended for human consumption during a 78-month period. The records considered for study were, date of slaughter, total pigs slaughtered and total number of ante mortem rejections (deaths during transportation and deaths in the pens) and post mortem carcass condemnations (osteomyelitis, caseous lymphadenitis, erysipelas, cachexia, pale, soft and exudative meat (PSE), bloody meat, muscular necrosis, purulent nephritis, purulent metritis, jaundice, meats from febrile pigs and peritonitis). The influence of several factors such as year, season, mandatory fulfilment of a food chain information form (FCIf) and compulsory certification of swine drivers/transporters on ante mortem rejections and post mortem carcass condemnation was also studied. A total of 161 001 pigs slaughtered resulted in 238 (0.15%) ante mortem deaths, 160 763 pigs processed for meat consumption (99.7%) and 392 (0.24%) carcass condemnations. The ante mortem rejections revealed that 146 pigs (61.3%) died during transportation whereas 92 (38.7%) were rejected due to death in pens. The main causes of carcass condemnations were osteomyelitis (38.5%), granulomatous lymphadenitis (22.7%) and pleurisy/pneumonia (21.2%). A relationship was found between the month and ante mortem condemnations (P < 0.01), death losses during transport (P < 0.01) and between compulsory certification of animal transporters and deaths by transportation (P < 0.05). During the cold season, the probability of ante mortem rejections (OR = 1.84; CI 95%: 1.32–2.59) and death in pens (OR = 1.62; CI 95%: 1.02–2.57) was higher. The compulsory fulfilment of a food chain information form was not revealed to be significantly linked with the total number of carcass condemnations although the odds of ante mortem rejections were higher (OR = 2.10; CI 95%: 1.44–3.08) when it was not mandatory. Higher post mortem condemnations compared to ante mortem condemnations can be explained by the fact that several post mortem findings are asymptomatic in live animals. A progressive decrease in losses during transport was associated with on-farm improvements in animal welfare measures in addition with compulsory training of animal transporters. However, the consistent values of deaths in pens throughout the study period, with an increase during the winter, indicate a need for an improvement in the thermal conditions of the holding area in slaughterhouse. Regarding the post mortem condemnations, the improvement in animal welfare conditions may explain the decrease in osteomyelitis condemnations while the environmental origin of granulomatous lymphadenitis may be associated with region, climate or with the presence of hosts that may explain the influence of the time of year on its variations. The FCIf was implemented as a measure to improve the transparency of food safety and animal health in the food chain from farm to fork. Although osteomyelitis and granulomatous lymphadenitis condemnations were influenced by the FCIf, this relationship cannot be fully explained due to the scarce information related to disease prevalence and/or diagnostics at the farm level. Consequently, the improvement in food safety elicited by this measure is not entirely clear. Data on carcass condemnation could be used to verify the emergence, evolution and control of swine diseases as well as to improve animal health, food safety and veterinary public health programs and/or strategies according to the epidemiological context, with the ultimate aim of guaranteeing public health.  


2001 ◽  
Vol 64 (5) ◽  
pp. 741-743 ◽  
Author(s):  
DANTE J. BUENO ◽  
JULIO O. SILVA ◽  
GUILLERMO OLIVER

This article reports on the identification of mycoflora of 21 dry pet foods (12 belonging to dogs and 9 to cats) that corresponded to 8 commercial brands made in Argentina and imported. The isolation frequency and relative density of the prevalent fungal genera are compared too. Ten genera and fungi classified as Mycelia sterilia were identified. The predominant genera were Aspergillus (62%), Rhizopus (48%), and Mucor (38%). The most prevalent among Aspergillus was Aspergillus flavus followed by Aspergillus niger and Aspergillus terreus. The predominant Mucor was Mucor racemosus followed by Mucor plumbeus and Mucor globosus. The moisture content of these foods ranged from 5.6 to 10.0% and from 7.2 to 9.9% for dog and cat foods, respectively. A greater moisture content in food for the senior category (9.5 ± 0.2) was observed only in comparison to adult and kitten/puppy. If the moisture content can be maintained at these levels, mold growth would be prevented or at least it would remain at an insignificant level. Some genera and species isolated and identified from the foods analyzed are potentially producing toxins, which are known as mycotoxins. This involves a risk for animal health.


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