scholarly journals 660. Effects of Culture Conditions and Viral Envelope on Gene Expression Profile and Retroviral Vector Integration in Human Hematopoietic CD34+ Cells

2009 ◽  
Vol 17 ◽  
pp. S252
Blood ◽  
2015 ◽  
Vol 126 (23) ◽  
pp. 5548-5548
Author(s):  
Rosalia Di Stefano ◽  
Elena Baiamonte ◽  
Melania Lo Iacono ◽  
Barbara Spina ◽  
Flavia Contino ◽  
...  

Abstract Introduction: Genetic modification of autologous hematopoietic stem and progenitor cells (HSPC) is a promising clinical intervention to cure inherited monogenic diseases. Successful gene therapy trials have already been conducted using CD34+ cells from bone marrow and from mobilized peripheral blood. In this regard, cord blood (CB) represents an attractive source of HSCs due to its high concentration of high proliferative HSPC and increased susceptibility to be transduced by lentiviral vectors. Unfortunately, the major disadvantage is the limited number of HSC in the CB collection. Consequently, ex-vivo expansion of CB-HSC is desirable to extend clinical applications. Purposes: To investigate the ability of UCB-cd34+ cells to be expanded in serum-free media supplemented with the early acting hematopoietic cytokines SCF,TPO and Flt-3 ligant (STF) and to characterize CD34+ cells subtypes, clonogenic capacity and gene expression profile during expansion. We also wanted to investigate the susceptibility of the expanded cd34+ cells to be transduced by a GFP-lentiviral vector (LV-GFP) Material and Methods: CD34+ immunoselected cells from 10 UCB were grown for 8 days in customized serum-free medium formulated for HSC expansion, supplemented with STF cytokines. Numbers end frequency of CD34+cells and co-expression of the primitive surface antigens (CD38, CD133, CD90) was evaluated during expansion. Colonies developed in methylcellulose were scored for enumeration ad typing. LV-GFP transduction efficiency was evaluated in CD34+ cells cultured for 4 days in expansion medium plus STF and for 24 hrs in X-vivo10 medium with STF±IL-3 cytokines; the last condition slightly expands CD34+ cells (1.3 fold) and are currently used for HSPC-lentivector transduction in gene therapy clinical trials. The transduction efficiency was evaluated by measuring the percentage of GFP+ cells in the bulk and in colonies developed in methylcellulose and the VCN/cell by Q-PCR. Gene expression profiles were analyzed by human whole genome Agilent microarray Technology to detect differentially expressed genes between expanded, ex-vivo medium cultured and un-cultured cells. Results: We found an average of 8 fold-increase CD34+cells at day 4 and of 22 fold- increase at day 8 of culture. The frequency of CD34+ was maintained at day 4 and declined of about 50% at day 8. CD34+/CD38- early progenitors doublet as early as day 4, differences in CD34+/CD133+ and CD34+/CD90+cells were not significant. The number of CFU slightly increased during expansion while the relative frequency of colonies type did not significantly changed. Four days expanded CD34+ cells were transduced more efficiently than those grown in ex-vivo medium even in presence of IL-3 added to the STF cytokine cocktail. Comprehensive gene expression profile analysis highlighted about 4000 genes differentially expressed in CD34+ cells expanded for 4 and for 8 days compared to that of the un-cultured cells. Conversely, the expression profiles analysis did not show any clear separation between different cell culture methods (expansion vs ex-vivo medium). Specifically, the number of differentially expressed genes in common between the different culture conditions compared with the un-cultured cells was statistically significant. Unsurprisingly, the common up-regulated genes were related to the cell cycle. The likeness between the gene expression profiles of the different culture conditions was also validated by the identification of a significantly small number of differentially expressed genes between them. Conclusions: UCB-CD34+ cells can be efficiently expanded and transduced in serum free conditions. The expanded cells exhibited phenotypic marchers typical of early progenitors and developed colonies in number and in type similar to the unmanipulated cells and exhibited whole gene expression profile that is consisted with that of CD34+ cells exposed for the short term culture conditions currently used in gene therapy trial mediated by lentiviral vectors. Results from this study open a window on the future possibility of using homologous UCB-HSC as target for gene correction in patients diagnosed for a genetic disorder in prenatal time. The genetically modified cells would be stored and used for gene therapy in the same individual in pediatric age. This work was funded by the F and P Cutino Foundation - Project RiMedRi CUP G73F12000150004 Disclosures No relevant conflicts of interest to declare.


2015 ◽  
Vol 55 (4) ◽  
pp. 373-381 ◽  
Author(s):  
Vladan P. Čokić ◽  
Slavko Mojsilović ◽  
Aleksandra Jauković ◽  
Nada Kraguljac-Kurtović ◽  
Sonja Mojsilović ◽  
...  

Blood ◽  
2014 ◽  
Vol 124 (21) ◽  
pp. 2210-2210
Author(s):  
Goitseone Lucy Hopkins ◽  
Andrew J Robinson ◽  
Paul S Hole ◽  
Richard L. Darley ◽  
Alex Tonks

Abstract Acute myeloid leukemia (AML) is a heterogeneous clonal disorder with a generally poor clinical outcome. Previously we have shown that over-production of reactive oxygen species (ROS) occurs in >60% of AML patients due to NOX oxidase activation and that this promotes growth factor independent proliferation of AML blasts (Hole et al., 2013). Normal CD34+ cells overexpressing mutant NRAS serve as a model for this since these cells also overproduce ROS through NOX activation, which in turn promotes their proliferation (Hole et al., 2010). We used this model to investigate the mechanism by which ROS promote proliferation by examining the effect of ROS on gene expression. CD34+ expressing NRASG12D showed an 8-fold (p<0.05) increase in ROS production compared to empty vector controls. DPI, a NOX inhibitor, virtually ablated ROS production (>90%; p<0.05) and also selectively inhibited proliferation of CD34+-NRAS cells (>60%; p<0.05). We next compared the gene expression profile (GEP) of NRAS and control cells ±DPI to determine the ROS-specific gene expression profile (Affymetrix Human Exon 1.0ST). NRAS changed the expression of 342 genes (>1.2 fold; p<0.05) of which 24 were specifically attributed to ROS production (Table 1). Most of these were associated with metabolic change; particularly glycolysis (p<0.0001 n=4). Consistent with this we found a doubling in the level of extracellular lactate production (indicating increased glycolysis) from NRAS cells compared to controls (n=4). Extracellular ROS (generated from GOX) also directly promoted a 1.3 fold increase in lactate production (n=4). These data suggest that ROS directly promotes glycolysis in hematopoietic cells. To examine this in AML we analysed a GEP database of 139 AML patients; this showed that those with high ROS (defined by high NOX2 oxidase expression; Hole et al., 2013) had a distinct profile of glycolytic enzyme overexpression, particularly ALDOC (r=0.4; p=2x10-25), GPI (r=0.4; p=2x10-8) and FBP1(r=0.7; p=5x10-8). These are amongst the most significant ROS-responsive genes in Table 1 and suggest that promotion of glycolysis through extracellular ROS production is also seen in AML blasts. To establish the functional significance of upregulated expression of glycolytic enzymes, we focused on the aldolase enzyme, ALDOC, since it showed the biggest induction with ROS and because overexpression of this enzyme has been recently associated with elevated glycolysis and poor prognosis in primary AML (Chen et al., 2014). We found that ALDOC was directly induced (2 fold) by physiological levels (150 nM/hour) of ROS in both normal CD34+ cells and in AML cell lines. We next examined the effect of stable ALDOC knockdown in 3 myeloid leukemia cell lines: Mv4;11 (1.5 fold reduction at the protein level), K562 (3.5 fold) and THP-1 (1.5 fold). Knockdown was associated with a reduction in proliferation in Mv4;11 and THP-1 cells (2- and 5-fold respectively; p<0.05 n=3) and also reduction in survival of THP-1 (1.7 fold; p<0.05, n=3). These data have identified ROS-responsive genes in CD34+ hematopoietic cells and show for the first time that a major target of ROS are enzymes of the glycolytic pathway. We also show evidence that ROS promotes glycolysis in both cell lines and in AML patients and that myeloid leukemia cells show dependency on ALDOC, for their growth and survival. Given the frequent overexpression of ROS in primary AML, these data provide a plausible mechanism for the enhanced glycolysis seen in AML (Chen et al., 2014) and suggest that agents restoring the redox environment could be used to correct metabolic imbalances which contribute to treatment resistance in this disease. Table 1. Effect of ROS on gene expression Gene Gene expression (fold and direction of change) p-value Protein validation (fold and direction of change where available) Process ALDOC +4.3 1×10-6 +2 Glycolysis ENO2 +2.6 1×10-4 +1.5 FBP1 +1.8 2×10-7 GPI +1.5 2×10-6 PFK-1 +1.4 9×10-6 GATM +2.8 3×10-5 +2 Metabolism SULF2 +2.1 2×10-5 CKB +2.1 7×10-5 ASPH +1.4 1×10-4 PTPRD +2.2 2×10-5 +2 Signal transduction KIT -2.1 5×10-5 0 CD32 +1.5 7×10-5 0 TNS1 +1.7 8×10-6 REC8 +1.4 6×10-5 STARD8 +1.4 3×10-5 CMTM8 -1.2 1×10-4 CNR2 -3.6 2×10-6 0 CD34 +1.7 4×10-5 0 Other CITED1 +1.7 6×10-5 +1.5 CYTL1 -1.9 6×10-6 CACNB1 +1.3 1×10-4 SLC6A8 +1.7 1×10-5 JAKMIP2 +1.2 3×10-5 WDR54 +1.8 5×10-6 Disclosures No relevant conflicts of interest to declare.


2017 ◽  
Vol 7 (1) ◽  
Author(s):  
Editorial Office

Referring to the article: Baiamonte E, Barone R, Contino F, et al. Granulocytecolony stimulating factor plus plerixafor in patients with β-thalassemia major results in the effective mobilization of primitive CD34+ cells with specific gene expression profile, published on Thalassemia Reports 2017; volume 7:6392, the following sentence in the Materials and Mehods section is not correct:(Filgrastim, Amgen, Thousand Oaks, CA, USA).Corrected sentence must be intended as follows:[Myelostim 34 F 33,6 33,6 MUI (263 mcg) (Lenograstim), Italfarmaco S.P.A.]


Stem Cells ◽  
2002 ◽  
Vol 20 (5) ◽  
pp. 402-416 ◽  
Author(s):  
Jeong-Ah Kim ◽  
Yu-Jin Jung ◽  
Ju-Young Seoh ◽  
So-Youn Woo ◽  
Jeong-Sun Seo ◽  
...  

2009 ◽  
Author(s):  
Rachel Yehuda ◽  
Julia Golier ◽  
Sandro Galea ◽  
Marcus Ising ◽  
Florian Holsborer ◽  
...  

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