scholarly journals Tuning as convex optimisation: a polynomial tuner for multi-parametric combinatorial samplers

Author(s):  
Maciej Bendkowski ◽  
Olivier Bodini ◽  
Sergey Dovgal

Abstract Combinatorial samplers are algorithmic schemes devised for the approximate- and exact-size generation of large random combinatorial structures, such as context-free words, various tree-like data structures, maps, tilings, RNA molecules. They can be adapted to combinatorial specifications with additional parameters, allowing for a more flexible control over the output profile of parametrised combinatorial patterns. One can control, for instance, the number of leaves, profile of node degrees in trees or the number of certain sub-patterns in generated strings. However, such a flexible control requires an additional and nontrivial tuning procedure. Using techniques of convex optimisation, we present an efficient tuning algorithm for multi-parametric combinatorial specifications. Our algorithm works in polynomial time in the system description length, the number of tuning parameters, the number of combinatorial classes in the specification, and the logarithm of the total target size. We demonstrate the effectiveness of our method on a series of practical examples, including rational, algebraic, and so-called Pólya specifications. We show how our method can be adapted to a broad range of less typical combinatorial constructions, including symmetric polynomials, labelled sets and cycles with cardinality lower bounds, simple increasing trees or substitutions. Finally, we discuss some practical aspects of our prototype tuner implementation and provide its benchmark results.

Author(s):  
N. H. Sarkar ◽  
Dan H. Moore

Mouse mammary tumor virus (MTV) is believed to contain about 0.8% single stranded ribonucleic acid (RNA). This value of RNA content was estimated on a dry weight basis. The subject of this report is an attempt to visualize the RNA molecules of MTV particles.MTV particles were isolated from RIII mouse (tumor incidence approximately 80%) milk according to the method described by Lyons and Moore. Purified virions from 5 ml of milk were finally suspended in 0.2 ml of PBS, pH 7.4 and was mixed with an equal volume of pronase (5 mg/ml). This mixture was incubated at 37°C for an hour. RNA was extracted three times using freshly prepared cold phenol. It was then treated three times with cold ethyl ether to remove any trace of phenol. The RNA thus extracted was divided into two parts. One part was diluted four fold with 8M urea to avoid aggregation of the molecules. The other part was left untreated. Both samples were then mixed with an equal volume of 1M ammonium acetate, adjusted to pH 8.0 with NH3 containing chymotrypsin at a concentration of 0.01%.


Author(s):  
Ruchama Baum ◽  
J.T. Seto

The ribonucleic acid (RNA) of paramyxoviruses has been characterized by biochemical and physiochemical methods. However, paramyxovirus RNA molecules have not been studied by electron microscopy. The molecular weights of these single-stranded viral RNA molecules are not known as yet. Since electron microscopy has been found to be useful for the characterization of single-stranded RNA, this investigation was initiated to examine the morphology and length measurements of paramyxovirus RNA's.Sendai virus Z strain and Newcastle disease virus (NDV), Milano strain, were used. For these studies it was necessary to develop a method of extracting RNA molecules from purified virus particles. Highly purified Sendai virus was treated with pronase (300 μg/ml) at 37°C for 30 minutes and the RNA extracted by the sodium dodecyl sulfate (SDS)-phenol procedure.


2002 ◽  
Author(s):  
Konstantin Malyshev ◽  
Yakov Lebedev

2020 ◽  
Vol 39 (6) ◽  
pp. 8463-8475
Author(s):  
Palanivel Srinivasan ◽  
Manivannan Doraipandian

Rare event detections are performed using spatial domain and frequency domain-based procedures. Omnipresent surveillance camera footages are increasing exponentially due course the time. Monitoring all the events manually is an insignificant and more time-consuming process. Therefore, an automated rare event detection contrivance is required to make this process manageable. In this work, a Context-Free Grammar (CFG) is developed for detecting rare events from a video stream and Artificial Neural Network (ANN) is used to train CFG. A set of dedicated algorithms are used to perform frame split process, edge detection, background subtraction and convert the processed data into CFG. The developed CFG is converted into nodes and edges to form a graph. The graph is given to the input layer of an ANN to classify normal and rare event classes. Graph derived from CFG using input video stream is used to train ANN Further the performance of developed Artificial Neural Network Based Context-Free Grammar – Rare Event Detection (ACFG-RED) is compared with other existing techniques and performance metrics such as accuracy, precision, sensitivity, recall, average processing time and average processing power are used for performance estimation and analyzed. Better performance metrics values have been observed for the ANN-CFG model compared with other techniques. The developed model will provide a better solution in detecting rare events using video streams.


2020 ◽  
Vol 12 (1) ◽  
pp. 17-22
Author(s):  
Alexander Nadel

This paper is a system description of the anytime MaxSAT solver TT-Open-WBO-Inc, which won both of the weighted incomplete tracks of MaxSAT Evaluation 2019. We implemented the recently introduced polarity and variable selection heuristics, TORC and TSB, respectively, in the Open-WBO-Inc-BMO algorithm within the open-source anytime MaxSAT solver Open-WBO-Inc. As a result, the solver is substantially more efficient.


TAPPI Journal ◽  
2009 ◽  
Vol 8 (1) ◽  
pp. 4-11
Author(s):  
MOHAMED CHBEL ◽  
LUC LAPERRIÈRE

Pulp and paper processes frequently present nonlinear behavior, which means that process dynam-ics change with the operating points. These nonlinearities can challenge process control. PID controllers are the most popular controllers because they are simple and robust. However, a fixed set of PID tuning parameters is gen-erally not sufficient to optimize control of the process. Problems related to nonlinearities such as sluggish or oscilla-tory response can arise in different operating regions. Gain scheduling is a potential solution. In processes with mul-tiple control objectives, the control strategy must further evaluate loop interactions to decide on the pairing of manipulated and controlled variables that minimize the effect of such interactions and hence, optimize controller’s performance and stability. Using the CADSIM Plus™ commercial simulation software, we developed a Jacobian sim-ulation module that enables automatic bumps on the manipulated variables to calculate process gains at different operating points. These gains can be used in controller tuning. The module also enables the control system designer to evaluate loop interactions in a multivariable control system by calculating the Relative Gain Array (RGA) matrix, of which the Jacobian is an essential part.


Author(s):  
Neveen Anwer Abdalla

The experiment has been conducted in the nursery of the Department of Horticulture and Landscape Design, College of Agriculture, the University of Basrah to study the effect of Spraying foliar of the biostimulants Izomen and Humus on the growth and flowering of Freesia plants. The corms in similar size were planted in pots with a diameter and height of 25 cm, which filled with 2.5 kg of sterilized loam soil. After 50 days of planting, the plants sprayed with Humus at 0, 1.5, 2.5 ml L-1 and after five days sprayed with Izomen at 0, 1.5, 2.5 ml L-1 The different concentrations of biostimulants are sprayed three times, the period between one spray and another 15 is days. The results showed that the spraying of Humus at 2.5 ml L-1 significantly increased the plant height, the number of leaves and the leaf content of chlorophyll recorded (29.56 cm, 8.33 and 58.43%) respectively. Moreover, it is recorded early the flowering date (130 days), and the highest flowering mean is (2.12 inflorescence/plant) and the highest period of the remained flowers on the plant and the vase life (10 and 8 days) respectively. The effects of both Humus and Izomen were similar. In addition to the highest mean of their interaction at 2.5 ml L -1for all the studied traits.


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