Ethanol on Graphite: Ordered Structures and Delicate Balance of Interfacial and Intermolecular Forces

Author(s):  
Xing He ◽  
Ding-Shyue Yang
2015 ◽  
Vol 6 ◽  
pp. 1498-1507 ◽  
Author(s):  
Szymon Godlewski ◽  
Jakub S Prauzner-Bechcicki ◽  
Thilo Glatzel ◽  
Ernst Meyer ◽  
Marek Szymoński

Transformations of molecular structures formed by perylene-3,4,9,10-tetracarboxylic dianhydride (PTCDA) molecules on a rutile TiO2(110) surface are studied with low-temperature scanning tunnelling microscopy. We demonstrate that metastable molecular assemblies transform into differently ordered structures either due to additional energy provided by thermal annealing or when the influence of intermolecular forces is increased by the enlarged amount of deposited molecules. Proper adjustment of molecular coverage and substrate temperature during deposition allows for fabrication of desired assemblies. Differences between PTCDA/TiO2(110) and PTCDA/TiO2(011) systems obtained through identical experimental procedures are discussed.


2011 ◽  
Vol 31 (2-3) ◽  
Author(s):  
Marko Vinceković ◽  
Marija Bujan ◽  
Maja Dutour Sikirić

Abstract Polymer and surfactant complexation was investigated in systems containing anionic biopolymers and cationic surfactants by various classical and modern methods. Differently charged carrageenans (one, two or three sulfate groups per monomeric unit) and dodecylammonium chloride (DDACl) were used as model systems. Formation of various soluble and insoluble complexes (from nano- to microdimensions) and gelation strongly depends on carrageenan and DDACl concentrations, their molar ratio and linear charge density on carrageenan chains. The main factors governing complexation include electrostatic and hydrophobic interactions as well as conformation of carrageenan chains. With increasing carrageenan concentration, the intramacromolecular complexes change to intermacromolecular, which subsequently reorganize into better ordered structures, giant vesicles, and precipitated stoichiometric compounds, dodecylammonium carrageenates. Structural analysis of the new compounds revealed the formation of a lamellar structure with the polar sublayer containing carrageenan chains and the non-polar sublayer consisting of disordered dodecylammonium chains electrostatically attached to the carrageenan backbone. At gelling carrageenan concentration, progressive addition of DDACl caused gradual transitions from the structure of carrageenan gel alone to lamellar ordering of collapsed gel balanced by intermolecular forces within the gel network, i.e., by hydrogen bonding, electrostatic, hydrophobic and van der Waals forces.


Author(s):  
A.-M. Ladhoff ◽  
B.J. Thiele ◽  
Ch. Coutelle ◽  
S. Rosenthal

The suggested precursor-product relationship between the nuclear pre-mRNA and the cytoplasmic mRNA has created increased interest also in the structure of these RNA species. Previously we have been published electron micrographs of individual pre-mRNA molecules from erythroid cells. An intersting observation was the appearance of a contour, probably corresponding to higher ordered structures, on one end of 10 % of the pre-mRNA molecules from erythroid rabbit bone marrow cells (Fig. 1A). A virtual similar contour was observed in molecules of 9S globin mRNA from rabbit reticulocytes (Fig. 1B). A structural transformation in a linear contour occurs if the RNA is heated for 10 min to 90°C in the presence of 80 % formamide. This structural transformation is reversible when the denatured RNA is precipitated and redissolved in 0.2 M ammonium acetate.


Author(s):  
U. Aebi ◽  
L.E. Buhle ◽  
W.E. Fowler

Many important supramolecular structures such as filaments, microtubules, virus capsids and certain membrane proteins and bacterial cell walls exist as ordered polymers or two-dimensional crystalline arrays in vivo. In several instances it has been possible to induce soluble proteins to form ordered polymers or two-dimensional crystalline arrays in vitro. In both cases a combination of electron microscopy of negatively stained specimens with analog or digital image processing techniques has proven extremely useful for elucidating the molecular and supramolecular organization of the constituent proteins. However from the reconstructed stain exclusion patterns it is often difficult to identify distinct stain excluding regions with specific protein subunits. To this end it has been demonstrated that in some cases this ambiguity can be resolved by a combination of stoichiometric labeling of the ordered structures with subunit-specific antibody fragments (e.g. Fab) and image processing of the electron micrographs recorded from labeled and unlabeled structures.


Author(s):  
E. Naranjo

Equilibrium vesicles, those which are the stable form of aggregation and form spontaneously on mixing surfactant with water, have never been demonstrated in single component bilayers and only rarely in lipid or surfactant mixtures. Designing a simple and general method for producing spontaneous and stable vesicles depends on a better understanding of the thermodynamics of aggregation, the interplay of intermolecular forces in surfactants, and an efficient way of doing structural characterization in dynamic systems.


Author(s):  
Weiping Liu ◽  
John W. Sedat ◽  
David A. Agard

Any real world object is three-dimensional. The principle of tomography, which reconstructs the 3-D structure of an object from its 2-D projections of different view angles has found application in many disciplines. Electron Microscopic (EM) tomography on non-ordered structures (e.g., subcellular structures in biology and non-crystalline structures in material science) has been exercised sporadically in the last twenty years or so. As vital as is the 3-D structural information and with no existing alternative 3-D imaging technique to compete in its high resolution range, the technique to date remains the kingdom of a brave few. Its tedious tasks have been preventing it from being a routine tool. One keyword in promoting its popularity is automation: The data collection has been automated in our lab, which can routinely yield a data set of over 100 projections in the matter of a few hours. Now the image processing part is also automated. Such automations finish the job easier, faster and better.


2006 ◽  
Vol 34 (10) ◽  
pp. 1-72 ◽  
Author(s):  
MICHELE G. SULLIVAN
Keyword(s):  

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