A Catalytic Cycle Related to Molybdenum Enzymes Containing [MoVIO2]2+Oxidized Active Sites

1996 ◽  
Vol 35 (26) ◽  
pp. 7508-7515 ◽  
Author(s):  
Zhiguang Xiao ◽  
Michael A. Bruck ◽  
John H. Enemark ◽  
Charles G. Young ◽  
Anthony G. Wedd

2020 ◽  
Author(s):  
Konstantin Khivantsev ◽  
Ja-Hun Kwak ◽  
Nicholas R. Jaegers ◽  
Miroslaw A. Derewinski ◽  
János Szanyi

<p>Cu/Zeolites catalyze selective catalytic reduction of nitric oxide with ammonia. Although the progress has been made in understanding the rate-limiting step of reaction which is reoxidation of Cu(I)(NH<sub>3</sub>)<sub>2</sub> with oxygen to restore the catalytically active Cu(II) site, the exact NO reduction chemistry remained unknown. Herein, we show that nitrosyl ions NO<sup>+</sup> in the zeolitic micropores are the true active sites for NO reduction. They react with ammonia even at below/room temperature producing molecular nitrogen through the intermediacy of N<sub>2</sub>H<sup>+</sup> cation. Isotopic experiments confirm our findings. No copper is needed for this reaction to occur. However, when NO<sup>+</sup> reacts, “freed up” Bronsted acid site gets occupied by NH<sub>3</sub> to form NH<sub>4</sub><sup>+</sup> – and so the catalytic cycle stops because NO<sup>+</sup> does not form on NH<sub>4</sub>-Zeolites due to their acid sites being already occupied. Therefore, the role of Cu(II) in Cu/Zeolite catalysts is to produce NO<sup>+</sup> by the reaction: Cu(II) + NO à Cu(I) + NO<sup>+ </sup>which we further confirm spectroscopically. The NO<sup>+</sup> then reacts with ammonia to produce nitrogen and water. Furthermore, when Cu(I) gets re-oxidized the catalytic cycle then can continue. Thus, our findings are critical for understanding complete SCR mechanism.</p>



2014 ◽  
Vol 70 (7) ◽  
pp. 1907-1913 ◽  
Author(s):  
Jun Ye ◽  
S. Venkadesh Nadar ◽  
Jiaojiao Li ◽  
Barry P. Rosen

The structure of glutaredoxin 2 (Grx2) fromEscherichia colico-crystallized with glutathione (GSH) was solved at 1.60 Å resolution. The structure of a mutant with the active-site residues Cys9 and Cys12 changed to serine crystallized in the absence of glutathione was solved to 2.4 Å resolution. Grx2 has an N-terminal domain characteristic of glutaredoxins, and the overall structure is congruent with the structure of glutathioneS-transferases (GSTs). Purified Grx2 exhibited GST activity. Grx2, which is the physiological electron donor for arsenate reduction byE. coliArsC, was docked with ArsC. The docked structure could be fitted with GSH bridging the active sites of the two proteins. It is proposed that Grx2 is a novel Grx/GST hybrid that functions in two steps of the ArsC catalytic cycle: as a GST it catalyzes glutathionylation of the ArsC–As(V) intermediate and as a glutaredoxin it catalyzes deglutathionylation of the ArsC–As(III)–SG intermediate.



2020 ◽  
Author(s):  
Konstantin Khivantsev ◽  
Ja-Hun Kwak ◽  
Nicholas R. Jaegers ◽  
Miroslaw A. Derewinski ◽  
János Szanyi

<p>Cu/Zeolites catalyze selective catalytic reduction of nitric oxide with ammonia. Although the progress has been made in understanding the rate-limiting step of reaction which is reoxidation of Cu(I)(NH<sub>3</sub>)<sub>2</sub> with oxygen to restore the catalytically active Cu(II) site, the exact NO reduction chemistry remained unknown. Herein, we show that nitrosyl ions NO<sup>+</sup> in the zeolitic micropores are the true active sites for NO reduction. They react with ammonia even at below/room temperature producing molecular nitrogen through the intermediacy of N<sub>2</sub>H<sup>+</sup> cation. Isotopic experiments confirm our findings. No copper is needed for this reaction to occur. However, when NO<sup>+</sup> reacts, “freed up” Bronsted acid site gets occupied by NH<sub>3</sub> to form NH<sub>4</sub><sup>+</sup> – and so the catalytic cycle stops because NO<sup>+</sup> does not form on NH<sub>4</sub>-Zeolites due to their acid sites being already occupied. Therefore, the role of Cu(II) in Cu/Zeolite catalysts is to produce NO<sup>+</sup> by the reaction: Cu(II) + NO à Cu(I) + NO<sup>+ </sup>which we further confirm spectroscopically. The NO<sup>+</sup> then reacts with ammonia to produce nitrogen and water. Furthermore, when Cu(I) gets re-oxidized the catalytic cycle then can continue. Thus, our findings are critical for understanding complete SCR mechanism.</p>



2002 ◽  
Vol 41 (26) ◽  
pp. 7086-7093 ◽  
Author(s):  
J. Jon A. Cooney ◽  
Michael D. Carducci ◽  
Anne E. McElhaney ◽  
Hugh D. Selby ◽  
John H. Enemark


2021 ◽  
Vol 23 (8) ◽  
pp. 4963-4974
Author(s):  
Xi Yu ◽  
Liangshu Zhong ◽  
Shenggang Li

Methane oxidation to methanol over Cu-ZSM-5 is found using DFT calculations to involve both [Cu2(O2)]2+ and [Cu2(μ-O)]2+ active sites.



Antioxidants ◽  
2020 ◽  
Vol 9 (9) ◽  
pp. 772 ◽  
Author(s):  
Ernesto Anoz-Carbonell ◽  
David J. Timson ◽  
Angel L. Pey ◽  
Milagros Medina

Human NQO1 [NAD(H):quinone oxidoreductase 1] is a multi-functional and stress-inducible dimeric protein involved in the antioxidant defense, the activation of cancer prodrugs and the stabilization of oncosuppressors. Despite its roles in human diseases, such as cancer and neurological disorders, a detailed characterization of its enzymatic cycle is still lacking. In this work, we provide a comprehensive analysis of the NQO1 catalytic cycle using rapid mixing techniques, including multiwavelength and spectral deconvolution studies, kinetic modeling and temperature-dependent kinetic isotope effects (KIEs). Our results systematically support the existence of two pathways for hydride transfer throughout the NQO1 catalytic cycle, likely reflecting that the two active sites in the dimer catalyze two-electron reduction with different rates, consistent with the cooperative binding of inhibitors such as dicoumarol. This negative cooperativity in NQO1 redox activity represents a sort of half-of-sites activity. Analysis of KIEs and their temperature dependence also show significantly different contributions from quantum tunneling, structural dynamics and reorganizations to catalysis at the two active sites. Our work will improve our understanding of the effects of cancer-associated single amino acid variants and post-translational modifications in this protein of high relevance in cancer progression and treatment.



2018 ◽  
Vol 140 (44) ◽  
pp. 14777-14788 ◽  
Author(s):  
Benjamin W. Stein ◽  
Jing Yang ◽  
Regina Mtei ◽  
Nicholas J. Wiebelhaus ◽  
Dominic K. Kersi ◽  
...  


Author(s):  
Alexis T. Bell

Heterogeneous catalysts, used in industry for the production of fuels and chemicals, are microporous solids characterized by a high internal surface area. The catalyticly active sites may occur at the surface of the bulk solid or of small crystallites deposited on a porous support. An example of the former case would be a zeolite, and of the latter, a supported metal catalyst. Since the activity and selectivity of a catalyst are known to be a function of surface composition and structure, it is highly desirable to characterize catalyst surfaces with atomic scale resolution. Where the active phase is dispersed on a support, it is also important to know the dispersion of the deposited phase, as well as its structural and compositional uniformity, the latter characteristics being particularly important in the case of multicomponent catalysts. Knowledge of the pore size and shape is also important, since these can influence the transport of reactants and products through a catalyst and the dynamics of catalyst deactivation.



Author(s):  
C. Jacobsen ◽  
J. Fu ◽  
S. Mayer ◽  
Y. Wang ◽  
S. Williams

In scanning luminescence x-ray microscopy (SLXM), a high resolution x-ray probe is used to excite visible light emission (see Figs. 1 and 2). The technique has been developed with a goal of localizing dye-tagged biochemically active sites and structures at 50 nm resolution in thick, hydrated biological specimens. Following our initial efforts, Moronne et al. have begun to develop probes based on biotinylated terbium; we report here our progress towards using microspheres for tagging.Our initial experiments with microspheres were based on commercially-available carboxyl latex spheres which emitted ~ 5 visible light photons per x-ray absorbed, and which showed good resistance to bleaching under x-ray irradiation. Other work (such as that by Guo et al.) has shown that such spheres can be used for a variety of specific labelling applications. Our first efforts have been aimed at labelling ƒ actin in Chinese hamster ovarian (CHO) cells. By using a detergent/fixative protocol to load spheres into cells with permeabilized membranes and preserved morphology, we have succeeded in using commercial dye-loaded, spreptavidin-coated 0.03μm polystyrene spheres linked to biotin phalloidon to label f actin (see Fig. 3).



2019 ◽  
Vol 9 (3) ◽  
pp. 811-821 ◽  
Author(s):  
Zhao-Meng Wang ◽  
Li-Juan Liu ◽  
Bo Xiang ◽  
Yue Wang ◽  
Ya-Jing Lyu ◽  
...  

The catalytic activity decreases as –(SiO)3Mo(OH)(O) > –(SiO)2Mo(O)2 > –(O)4–MoO.



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